You are here

Home

M747DRAFT_155756-T1, M747DRAFT_155756-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_155756-T1
Unique NameM747DRAFT_155756-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:1045758..1046736-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_155756-T1 ID=M747DRAFT_155756-T1|Name=M747DRAFT_155756-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=979bp|location=Sequence derived from alignment at KZ851904.1:1045758..1046736- (Aspergillus niger ATCC 13496)
GTCCGGGATAATCCCACCGTCAAAGACGTCGTCCCATCTCTCCAACGTCA
CTCCTGCACCTCATCCACCTCCAGCCATGTTCCCTCAGCGCAACGCCCTT
CGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTC
CACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGG
CCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCT
GCTGCTACCAGTGGTGCGTATTGAGATCAATTGATGCCGAGATCTTGCAA
GGATGTGGTTGTGCTAACTCAATGGCTGTCTTACTGCTCCAGATCTGTGG
CGCAAGCTCTCCATCTAGTATGTGGGCTAGCTATTACTACCGCAATTGAC
TTCTAGTAACATTCTACTTTTTCGCAGCGCCGTCATTCCTGTCCTGATTG
CCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACTGGGAACACTGG
GCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACAT
CCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGGTGCGTCCCGGAC
ATTTTACTCTCATGCAATGCCAATCTGAGTGCTGACGATTTTATTTCTTT
CTCCAGACCATCTTGTAAGTTCCTTACACCCGAAATTTCCAGCGTCGGGC
ATAACTCGACAGTCAATAATAACGATGCCTTCTAACAAACTCACAGCTGG
AACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCTAAATGCCCGC
CGTTGATTATGGGAGTACAGCGTCTTTGATTGATCTTGACTGTTGACGGG
AGGGGAAATCAAAAGACATGTATATTTACTGACAAAATACGCGGAAGTAA
GAATAACGAGGGCAAGGCTCTCGTTGGTGGAGTTGAGATAGCGCGCCATA
CAATACTGCTAAGCCATTTTTCTTTTGTT
back to top

Coding sequence (CDS) from alignment at KZ851904.1:1045758..1046736-

>M747DRAFT_155756-T1 ID=M747DRAFT_155756-T1|Name=M747DRAFT_155756-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2130bp|location=Sequence derived from alignment at KZ851904.1:1045758..1046736- (Aspergillus niger ATCC 13496)
CTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCTAAACCA
TCTTCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCTACAAC
CTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTCGAGGA
GCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCCCTGGG
GAGACGGTGACAAGATCTGTGGCGCAAGCTCTCCATCTAATGTTCCCTCA
GCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTG
CTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAG
CTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGT
CAAGCACCACGCTGCTGCTACCAGTGCTGGAACTCCGACGTCAACTACCA
CAACAAGGACAAGGCTACCTAAACCATCTTCGCCGTCATTCCTGTCCTGA
TTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACTGGGAACAC
TGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCCTACCAGAA
CATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGATCTGTGGCG
CAAGCTCTCCATCTAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCA
GCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGC
GCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAAC
GAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAG
TGCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCTAAAC
CATCTTCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCTACA
ACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTCGAG
GAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCCCTG
GGGAGACGGTGACAAGATCTGTGGCGCAAGCTCTCCATCTAATGTTCCCT
CAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGC
TGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCA
AGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAGAGAGAGGCC
GTCAAGCACCACGCTGCTGCTACCAGTGCTGGAACTCCGACGTCAACTAC
CACAACAAGGACAAGGCTACCTAAACCATCTTCGCCGTCATTCCTGTCCT
GATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACTGGGAAC
ACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCCTACCAG
AACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGATCTGTGG
CGCAAGCTCTCCATCTAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCT
CAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCA
GCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACA
ACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACC
AGTGCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCTAA
ACCATCTTCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCTA
CAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTCG
AGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCCC
TGGGGAGACGGTGACAAGATCTGTGGCGCAAGCTCTCCATCTAATGTTCC
CTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGT
GCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTC
CAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAGAGAGAGG
CCGTCAAGCACCACGCTGCTGCTACCAGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005751mitochondrial respiratory chain complex IV
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_155756M747DRAFT_155756Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_155756-T1M747DRAFT_155756-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_155756-T1.cdsM747DRAFT_155756-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_155756-T1.utr3p1M747DRAFT_155756-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_155756-T1.exon5M747DRAFT_155756-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_155756-T1.exon4M747DRAFT_155756-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_155756-T1.exon3M747DRAFT_155756-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_155756-T1.exon2M747DRAFT_155756-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_155756-T1.exon1M747DRAFT_155756-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_155756-T1.utr5p1M747DRAFT_155756-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092654RM
DBxrefInterPro:IPR018507
DBxrefInterPro:IPR036418
DBxrefInterPro:IPR001349
DBxrefPFAM:PF02046
Productmitochondrial cytochrome c oxidase subunit VIa
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:1045758..1046736 -
Powered by Drupal