You are here

Home

M747DRAFT_156224-T1, M747DRAFT_156224-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_156224-T1
Unique NameM747DRAFT_156224-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851958.1:11700..13464-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_156224-T1 ID=M747DRAFT_156224-T1|Name=M747DRAFT_156224-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1765bp|location=Sequence derived from alignment at KZ851958.1:11700..13464- (Aspergillus niger ATCC 13496)
ACAGTCACCGAACAGTACAGGGTCATTGTGGATGGTGCAGAGTTTAGATA
ATTGAGCCTTATCGTTTGCGAATCGCAGTTGGTGTCAGCCGTCATCTGGT
TCCACTTCCGGTCGCTCCCATAGAGACGAACAGCCTTCGCAGAACATCCT
ACTATCAACATCCTTCACTCTCCTTCCACTCCTTCTTTCCCTACCCCATT
CCTCTCCTTAACCCTCTCTTCGCCCTCAGTTTCCGTCAAGCATAGCCAGA
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTT
CCGCGCCGTTTTCGTTCCAATTTCCCCGCAATTCTCTTAAACAGGTGGTT
CGGCTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATC
CTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGAT
TCCTCCGGAGATTTTGGCAGGAGCCAAGGTAATTAGCAAATTCAATACTG
AGCCTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTC
CTCGGCCATGAAACTAATCATTGCTATTCAGTAACTATGTCGAAACTGCT
TAGGAGTCGGCTTGTCCTAGTTGGACTCACGCGGAATGATATTGGACGAT
GCGAGCACTTTTAAC
back to top

Coding sequence (CDS) from alignment at KZ851958.1:11700..13464-

>M747DRAFT_156224-T1 ID=M747DRAFT_156224-T1|Name=M747DRAFT_156224-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4944bp|location=Sequence derived from alignment at KZ851958.1:11700..13464- (Aspergillus niger ATCC 13496)
TAACTATGTCGAAACTGCTTAGGGTCTCGCCGTTCTTACTGTCCTGAAAG
CTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGA
CTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGC
TGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCT
TGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACG
CTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGA
AGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACT
CCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTG
GTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGC
ACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTC
TCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGT
AGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGT
GGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCG
ACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCC
CGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGG
GTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACG
ACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTAT
GTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTT
TGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAG
CACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAA
GGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTG
GACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGA
AAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGG
GCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTC
TCGGAATTCACAATCCGTTACCTTCATCGTTAGGAATAACTATGTCGAAA
CTGCTTAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGC
TCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAAC
CTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTC
AGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCA
GCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGT
TTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGG
CTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGT
CTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGA
TGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCA
GCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTG
AACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAA
CGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCC
GCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTC
AGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATAC
ATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCAT
CGACTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGC
AGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTATATTCTGACCG
CAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCG
GGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTT
GATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTAC
CATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCG
GGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAAT
CCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGA
TTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTCTCGGAATTCACAAT
CCGTTACCTTCATCGTTAGGAATAACTATGTCGAAACTGCTTAGGGTCTC
GCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGG
TTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGT
CGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAG
TTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTT
CTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTG
GACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGT
GTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGT
CAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGA
TGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGA
CCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTT
CTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTT
ATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCG
TACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTC
AGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATA
TATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTAC
AGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATAC
CACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGAC
CCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCT
CTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGA
AGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGA
CTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGC
ATTTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTG
TCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATT
TTGGCAGGAGCCAAGATGCCTCTCGGAATTCACAATCCGTTACCTTCATC
GTTAGGAATAACTATGTCGAAACTGCTTAGGGTCTCGCCGTTCTTACTGT
CCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCG
TCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACT
GCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGT
GTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGA
CCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGA
AACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTT
CTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAA
GCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGG
GTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGC
GGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCC
GGAATGGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCAT
GACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAAC
GCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGG
ACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCT
GCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGA
CAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACG
AGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAA
CCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCA
GGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTT
TCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAG
GACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCG
AATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAA
GCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAA
GATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_156224M747DRAFT_156224Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156224-T1M747DRAFT_156224-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156224-T1.cdsM747DRAFT_156224-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156224-T1.utr3p1M747DRAFT_156224-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156224-T1.exon4M747DRAFT_156224-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_156224-T1.exon3M747DRAFT_156224-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_156224-T1.exon2M747DRAFT_156224-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_156224-T1.exon1M747DRAFT_156224-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156224-T1.utr5p1M747DRAFT_156224-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR033643
DBxrefInterPro:IPR007461
DBxrefInterPro:IPR001452
DBxrefPFAM:PF04366
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductDUF500-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851958.1supercontigKZ851958.1:11700..13464 -
Powered by Drupal