You are here

Home

M747DRAFT_156332-T1, M747DRAFT_156332-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_156332-T1
Unique NameM747DRAFT_156332-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851958.1:29101..31428-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_156332-T1 ID=M747DRAFT_156332-T1|Name=M747DRAFT_156332-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2328bp|location=Sequence derived from alignment at KZ851958.1:29101..31428- (Aspergillus niger ATCC 13496)
GGTCCGATCTTTGCGACGGACCACACCACCTATACCCCGAATTTCTCGCC
TTGACGGCCTCTTCGTTTTCCTCCGGCAGGTTTTCCTGTTCGGCTACTAT
CCTCATACAAAACAACCTTATATAAAAGACCAAAACTAGGCGGAGAAGCG
TGCGACTTCTTGGCCCCCACTCTGTTCACTTATACCCTTTTGATCTATAT
ACCGTCGCGAATCGTCGCATGTTCCTTTCTCAGTAACCGCGGCGATGCTT
ATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGTGT
CAGCAGCTGTCACCACAGTGGTAAGTGTGGCAACCATCTCTGACGCATCA
CATCTTCTTCCCGTCGCAATTGCTAACGTGGCTTGGCTGCAGACCGCCCC
TTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTG
TCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGTGTGGTG
ACAAGAAAAAGAATTGCCACAAGAATGACTTAGATCCCCATGCTACGGAT
AAGCGGGATCACAAGCGTGAGCATGATGGTGATGGTGAACTGGTTCATAG
TTTTCTGATCTGGATTTTACAGAGGACTCCCGTCCAAAATGTGGCTGCAC
TCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAACCCCACCTGGATA
CCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCGACGCTGTTGGAT
CAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGAGAGTACCTTGAC
CATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGCACAACGACATGG
CTCATAAATGCGGTCTGCCCTATACGATACCCCGTTCTCATACCATCCAT
GCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCCTTTGGTCCAGCC
CACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGCCCGCAGAACAGT
CACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAACATGGTTCTCCT
GAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGACAACCGTTCCCCC
ACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAGCGGAGAACGCTG
GTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATGAAGACCCCTCTG
GACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTCATCATTCTCATC
CTTCCCAACAACAGCGACGTCGCCTGTCAATTGTGTCGCATTTCAGGACC
CCTACAAGGAGCCTTTCTTCACCTCACCGGAGGGCGACGTGTCTCTTCAG
TCGACCGCATTCAGCGCCCCTCCAGTCGATTGGTCAAGCTTCCCTCTGTA
CTCCTCGGAAGTACCAGCCGCGACAAGCACTCAAGCACCTTCCTACGCAA
GCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCCATCATCATCC
GGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGCTTGGGACG
TACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGGCTCCGATA
TCGACCATTTCCGCATCAGCTCGGCGTCGTCCTTCATTGGCCTTCCTCAG
GCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATTGACGACTT
CCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCAGCTCCAGG
CCACGATGGGCATGGAAGCCAAGCAACTTCCCACCGAGGACGCCTTCGCC
ATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACTGCCAGCAT
GTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGGGCTCTTCG
ACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATTTCTACGTG
CCGCCATGGGTGCAGTAAGGCTGGCTTTTGGATGAGACGCGGCTTGCTAC
ATAGTGTTGTGGTCTGTTCGCGGCACCTTACCACCACCTCCACACCGTCT
GAGTGACGACACCCACGTCTTCATGACCTTGATGAGAGATGATGATAAAT
GCCTGATTTATCTGTGTTCTATTTAGCAGTCCGAGAGTGACACTAAACTA
TAGCATCCAATTTTATAAAGATTACTATTGTTTCATTCATTCGGCTTTTT
TTTTTTTTTACTGCCCCCACTGGGTCTTGTCCAACCCTGTATACATTTGC
ATATTCCTTACCGCTTCCTAGTTCTTTTCTGTGGCTGATTGTGTCGAGTC
ACTCGCTCTGCCATTTTCACCTCGCGCG
back to top

Coding sequence (CDS) from alignment at KZ851958.1:29101..31428-

>M747DRAFT_156332-T1 ID=M747DRAFT_156332-T1|Name=M747DRAFT_156332-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4788bp|location=Sequence derived from alignment at KZ851958.1:29101..31428- (Aspergillus niger ATCC 13496)
AGGACTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGT
GCGCTGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCC
TCCACCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGA
CCTCGACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCAC
AAGCCGGCTCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTA
TACGATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCT
CGGTCGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTC
GCGAATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCG
CCGTGTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGC
CGGACAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTC
CCTCAAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCC
GGTCTCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGT
TACCCTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCG
CCTGTCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCAC
CTCACCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTC
CAGTCGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCG
ACAAGCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGC
ACCCGGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATG
AGTTCGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGAT
CTCAACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTC
GGCGTCGTCCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATA
ACCTTGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCC
ACCGCGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAA
GCAACTTCCCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCA
AGCCGGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACC
GAAGCCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAG
CGAAAACAGCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAAACCG
CCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGCTC
ACTGTCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGTGT
GGTGACAAGAAAAAGAATTGCCACAAGAATGACTTAGATCCCCATGCTAC
GGATAAGCGGGATCACAAGCATGCTTATCGATGGCGAGAAGTGGGCTTGT
GAAGCTTGCGTCCGGGGTCACCGTGTCAGCAGCTGTCACCACAGTGAGGA
CTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGC
TGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCA
CCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTC
GACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGC
CGGCTCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTATACG
ATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGT
CGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGA
ATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGT
GTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGA
CAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTC
AAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTC
TCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACC
CTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCGCCTG
TCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACCTCA
CCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGT
CGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAA
GCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCC
GGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTT
CGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCA
ACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCGGCG
TCGTCCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATAACCT
TGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCG
CGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAA
CTTCCCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCC
GGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAG
CCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAA
AACAGCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAAACCGCCCC
TTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTG
TCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGTGTGGTG
ACAAGAAAAAGAATTGCCACAAGAATGACTTAGATCCCCATGCTACGGAT
AAGCGGGATCACAAGCATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAG
CTTGCGTCCGGGGTCACCGTGTCAGCAGCTGTCACCACAGTGAGGACTCC
CGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAA
GAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCC
CAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACC
AAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGCCGGC
TCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTATACGATAC
CCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGAC
CACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCA
ACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGTGTCA
AGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAAC
GTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGT
TCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGA
TGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTC
GACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCGCCTGTCAA
TTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACCTCACCGG
AGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGAT
TGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCAC
TCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCCGGGT
TCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCG
CCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCAACAG
CGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCGGCGTCGT
CCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATAACCTTGAG
TCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGC
GTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTC
CCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTG
ACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAGCCGC
TTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAAAACA
GCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAAACCGCCCCTTGA
CCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGC
GGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGTGTGGTGACAA
GAAAAAGAATTGCCACAAGAATGACTTAGATCCCCATGCTACGGATAAGC
GGGATCACAAGCATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTG
CGTCCGGGGTCACCGTGTCAGCAGCTGTCACCACAGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0005507copper ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_156332M747DRAFT_156332Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156332-T1M747DRAFT_156332-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156332-T1.cdsM747DRAFT_156332-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156332-T1.utr3p1M747DRAFT_156332-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156332-T1.exon3M747DRAFT_156332-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_156332-T1.exon2M747DRAFT_156332-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_156332-T1.exon1M747DRAFT_156332-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_156332-T1.utr5p1M747DRAFT_156332-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036395
DBxrefInterPro:IPR001083
DBxrefPFAM:PF00649
Productcopper fist DNA binding domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851958.1supercontigKZ851958.1:29101..31428 -
Powered by Drupal