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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851962.1:40055..42749+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_158963-T1 ID=M747DRAFT_158963-T1|Name=M747DRAFT_158963-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2695bp|location=Sequence derived from alignment at KZ851962.1:40055..42749+ (Aspergillus niger ATCC 13496)
CTTTGAGCTCGGTCGCAAGCGCGAATTAGATGGATCGCGGTGTCTTTGAT
ATTGCTTGACATACTGGCAAGGCCCGCAGAGCTTTATAACTCACATCATC
TTACTGCAGACTAGTTGGCTTAGTCTCTGTATTCACCAGACTTTACACCT
TGTTTGTATGCAGTGATTCGAACACTGGCCGTGCAGCACTCAAGACGCTT
CTTCAATCTACTGAGTTCGAGCAAAGCCCTCGATAGATACTGGGTTTTCG
ATCTCTAAGCATTTGAGACGAGTGAGGTTATACGTCATAACTGTCATCTG
CAATTTGCCAACCGTTCCGATTGTTGCTTGTTATCATTTGTCTGCCTTTG
TTCTCGTGTATCTCTTGTGAAAGTGGCACCCCTCTATTGATCTAATTACA
TTCGCAACACCATCATTGACGTGCAATTGAATACAATGTCATCCTCTGTT
CACTTCAAGTTCAAGTCTCAAAAGGAGCCTTCAAGGGTGACTTTTGATGG
CACCGGTATCTCTGTCTTCGAATTGAAAAGAGAAATTATCAATCAGAGTA
GACTGGGTGACGGGACTGACTTCGAGCTGTCTATCTACAATGAAGATACT
GGAGAAGGTTAGTAGCTTCTGGAAATTGATTGCCCTGGTTTTACCGTTCA
TATTCAACTTTGGGTCCCCCCCAAATTCCCTTCCTTTCTCCCAAAATCCC
GTCTGGCAGAGTGGGAGCAGGTTCGTGGTCGAAGTTAAGAGAAAAGATCC
TTACGGACTGACCGTTTGTTTTTTGGGACAGAATACGATGATGACACCAG
CATAATACCGCGTTCTACGTCCGTCATAGCTCGGAGATTACCTGCATCAC
GCCCGGGTAAGGGTGGTGCTGCTCGTTATGTTTCCGGGAAAATGCCAGTC
AATGCGCGCAGTGCCCCCCGTAATGAACAATATCCCTTGACTCGGGCATC
TCCCAATACTAGCAACGGTGTTCTAGAGCTCAACAATGCCCAGACGGAGG
AAGAGAAGATCAATGCACTCTTCAATTTGCAAGCAAACCAATGGAAAGAA
CAGCAGCAGGAAATGGCAAAGTAAGTGTGTCTATGCGTAGTGAGACTTTT
TTCTCTCCCCTCTTCTGGTATTGACAATCTATCTCCCGTATAGCGCTACC
CCTGTTCCATTCGGCCGTGGAAGGGGCAGGCCTGTGAATGTTCCTGATCA
CCCCCCTCCCCCCGGCTACCTATGTTACCGCTGTCGCGAGAAAGGCAAGC
TGCTTTGGCATAACTTACTGAAAGCGAAAACTAACGGTGTATGTCTAGGA
CACTGGATTCAAGCTTGCCCCACAAATAATGACCCAAAATTTGATGGGAA
ATATAGAGTTAAACGATCAACTGGTATACCTCGTTCGTTACAAACCAAGG
TTGAGAAGCCGGAATCCCTCACCCTGGACGGCTCAAACGAGGATCCAAGG
AACACAGGTGTCATGGTCAATGCCGATGGCGATTTTGTCATAGCCAAGCC
TGACAAGGCAGCTTGGGAATTATACCAGGAGAAAGCCAAAGCCTCCGCAG
CAGCCGCGGCAGAAGCGGCAGCAGCAGAGTACAGCAAAGAACTGCAAGCA
CGTGGTTTAGAGTGTCCGATTGACAAGCGAATGTTTTTAGAGCCCACGAG
AACTCCATGCTGTCAAAGAACATACTGCAATGATTGTATTACCAATGCAT
TGATCGAGAGCGATTTTGTATGCCCTGGCTGTGGAACGGAGGGAGTGTTA
CTCGATAACCTTGCCGTTGATGACGAGGCTATTAGCAAGATTAAAGAGTA
CGAAGCTGAAAAGGCTGATTCGAAGAAAGAGAAGGACAAGCAACAGGCAA
ATGACATTGGTCCGGGCATTGACAAAACAGCCATTCAAGGCAAAGGGCCT
GTTGCAACAACGGAGTCCTTGCCACCAATTCCGCCTAGTCAACCTGCTTC
TAACAAAAGACCTGCAGAGGATGAAACTCCGCGTACCGCTGTTGGTGGAT
CAAGCCCTAGTTCATTGTCCAAGAAATTGAAGACAAACGACAAGGCCGAT
TCACAAACTCCACAGGCTACTGGGCCTGTGACCGGGTTTCCAGCTTTTCC
ATTCGGCCAGCAGATGCCGTTCGGGAGTTTTGGATTCATGCCGAACCAGG
GTATGCCTGCGATGCCATTGTCTGATCCTATGAACGCTATGGGTGTTCCT
TCGTCTGGTGGCTTTCCACCTAATATGGATCAGTCGTGGAATCCCATGAA
TGCTATGAATTTTAATCCTGCCCCAGGAATGTATGGCGATAATGTGAACA
GTTATGCCACACCGAACCTTTACAACGGCGTCGGAGAGCCATCTATGAAT
ATGTTCCACATGCCCCAAATGATGGGACTTCAACCAAATTCCGGTCTTGC
GCAAGGTCCCGGAATAGGTCGATTTTCAAATCAACAGAGAACGACGTTCA
GTACGCCATTTGCCAGGGAAGAAGACACGGCTTATTTCCGGCAACCTGTT
AACCCACAACGGCACCAAGCGAGACACAGGAGGATACGGCCAAGTGACTA
TCGAGAACTCTAAATTGGTGTAGATGGAAGTCACTTCAACATGCCCGCGG
TTGTTAGGTCTCAGGTCCTTCTTCTCCCGATATATCTTGCTTTTCACCCC
ACCCTTTTCTGTTCTTTTTCATCCCTGATGTTCATCGGCGTTCAC back to topCoding sequence (CDS) from alignment at KZ851962.1:40055..42749+ >M747DRAFT_158963-T1 ID=M747DRAFT_158963-T1|Name=M747DRAFT_158963-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7308bp|location=Sequence derived from alignment at KZ851962.1:40055..42749+ (Aspergillus niger ATCC 13496)
ATGTCATCCTCTGTTCACTTCAAGTTCAAGTCTCAAAAGGAGCCTTCAAG
GGTGACTTTTGATGGCACCGGTATCTCTGTCTTCGAATTGAAAAGAGAAA
TTATCAATCAGAGTAGACTGGGTGACGGGACTGACTTCGAGCTGTCTATC
TACAATGAAGATACTGGAGAAGAATACGATGATGACACCAGCATAATACC
GCGTTCTACGTCCGTCATAGCTCGGAGATTACCTGCATCACGCCCGGGTA
AGGGTGGTGCTGCTCGTTATGTTTCCGGGAAAATGCCAGTCAATGCGCGC
AGTGCCCCCCGTAATGAACAATATCCCTTGACTCGGGCATCTCCCAATAC
TAGCAACGGTGTTCTAGAGCTCAACAATGCCCAGACGGAGGAAGAGAAGA
TCAATGCACTCTTCAATTTGCAAGCAAACCAATGGAAAGAACAGCAGCAG
GAAATGGCAAACGCTACCCCTGTTCCATTCGGCCGTGGAAGGGGCAGGCC
TGTGAATGTTCCTGATCACCCCCCTCCCCCCGGCTACCTATGTTACCGCT
GTCGCGAGAAAGGACACTGGATTCAAGCTTGCCCCACAAATAATGACCCA
AAATTTGATGGGAAATATAGAGTTAAACGATCAACTGGTATACCTCGTTC
GTTACAAACCAAGGTTGAGAAGCCGGAATCCCTCACCCTGGACGGCTCAA
ACGAGGATCCAAGGAACACAGGTGTCATGGTCAATGCCGATGGCGATTTT
GTCATAGCCAAGCCTGACAAGGCAGCTTGGGAATTATACCAGGAGAAAGC
CAAAGCCTCCGCAGCAGCCGCGGCAGAAGCGGCAGCAGCAGAGTACAGCA
AAGAACTGCAAGCACGTGGTTTAGAGTGTCCGATTGACAAGCGAATGTTT
TTAGAGCCCACGAGAACTCCATGCTGTCAAAGAACATACTGCAATGATTG
TATTACCAATGCATTGATCGAGAGCGATTTTGTATGCCCTGGCTGTGGAA
CGGAGGGAGTGTTACTCGATAACCTTGCCGTTGATGACGAGGCTATTAGC
AAGATTAAAGAGTACGAAGCTGAAAAGGCTGATTCGAAGAAAGAGAAGGA
CAAGCAACAGGCAAATGACATTGGTCCGGGCATTGACAAAACAGCCATTC
AAGGCAAAGGGCCTGTTGCAACAACGGAGTCCTTGCCACCAATTCCGCCT
AGTCAACCTGCTTCTAACAAAAGACCTGCAGAGGATGAAACTCCGCGTAC
CGCTGTTGGTGGATCAAGCCCTAGTTCATTGTCCAAGAAATTGAAGACAA
ACGACAAGGCCGATTCACAAACTCCACAGGCTACTGGGCCTGTGACCGGG
TTTCCAGCTTTTCCATTCGGCCAGCAGATGCCGTTCGGGAGTTTTGGATT
CATGCCGAACCAGGGTATGCCTGCGATGCCATTGTCTGATCCTATGAACG
CTATGGGTGTTCCTTCGTCTGGTGGCTTTCCACCTAATATGGATCAGTCG
TGGAATCCCATGAATGCTATGAATTTTAATCCTGCCCCAGGAATGTATGG
CGATAATGTGAACAGTTATGCCACACCGAACCTTTACAACGGCGTCGGAG
AGCCATCTATGAATATGTTCCACATGCCCCAAATGATGGGACTTCAACCA
AATTCCGGTCTTGCGCAAGGTCCCGGAATAGGTCGATTTTCAAATCAACA
GAGAACGACGTTCAGTACGCCATTTGCCAGGGAAGAAGACACGGCTTATT
TCCGGCAACCTGTTAACCCACAACGGCACCAAGCGAGACACAGGAGGATA
CGGCCAAGTGACTATCGAGAACTCTAAATGTCATCCTCTGTTCACTTCAA
GTTCAAGTCTCAAAAGGAGCCTTCAAGGGTGACTTTTGATGGCACCGGTA
TCTCTGTCTTCGAATTGAAAAGAGAAATTATCAATCAGAGTAGACTGGGT
GACGGGACTGACTTCGAGCTGTCTATCTACAATGAAGATACTGGAGAAGA
ATACGATGATGACACCAGCATAATACCGCGTTCTACGTCCGTCATAGCTC
GGAGATTACCTGCATCACGCCCGGGTAAGGGTGGTGCTGCTCGTTATGTT
TCCGGGAAAATGCCAGTCAATGCGCGCAGTGCCCCCCGTAATGAACAATA
TCCCTTGACTCGGGCATCTCCCAATACTAGCAACGGTGTTCTAGAGCTCA
ACAATGCCCAGACGGAGGAAGAGAAGATCAATGCACTCTTCAATTTGCAA
GCAAACCAATGGAAAGAACAGCAGCAGGAAATGGCAAACGCTACCCCTGT
TCCATTCGGCCGTGGAAGGGGCAGGCCTGTGAATGTTCCTGATCACCCCC
CTCCCCCCGGCTACCTATGTTACCGCTGTCGCGAGAAAGGACACTGGATT
CAAGCTTGCCCCACAAATAATGACCCAAAATTTGATGGGAAATATAGAGT
TAAACGATCAACTGGTATACCTCGTTCGTTACAAACCAAGGTTGAGAAGC
CGGAATCCCTCACCCTGGACGGCTCAAACGAGGATCCAAGGAACACAGGT
GTCATGGTCAATGCCGATGGCGATTTTGTCATAGCCAAGCCTGACAAGGC
AGCTTGGGAATTATACCAGGAGAAAGCCAAAGCCTCCGCAGCAGCCGCGG
CAGAAGCGGCAGCAGCAGAGTACAGCAAAGAACTGCAAGCACGTGGTTTA
GAGTGTCCGATTGACAAGCGAATGTTTTTAGAGCCCACGAGAACTCCATG
CTGTCAAAGAACATACTGCAATGATTGTATTACCAATGCATTGATCGAGA
GCGATTTTGTATGCCCTGGCTGTGGAACGGAGGGAGTGTTACTCGATAAC
CTTGCCGTTGATGACGAGGCTATTAGCAAGATTAAAGAGTACGAAGCTGA
AAAGGCTGATTCGAAGAAAGAGAAGGACAAGCAACAGGCAAATGACATTG
GTCCGGGCATTGACAAAACAGCCATTCAAGGCAAAGGGCCTGTTGCAACA
ACGGAGTCCTTGCCACCAATTCCGCCTAGTCAACCTGCTTCTAACAAAAG
ACCTGCAGAGGATGAAACTCCGCGTACCGCTGTTGGTGGATCAAGCCCTA
GTTCATTGTCCAAGAAATTGAAGACAAACGACAAGGCCGATTCACAAACT
CCACAGGCTACTGGGCCTGTGACCGGGTTTCCAGCTTTTCCATTCGGCCA
GCAGATGCCGTTCGGGAGTTTTGGATTCATGCCGAACCAGGGTATGCCTG
CGATGCCATTGTCTGATCCTATGAACGCTATGGGTGTTCCTTCGTCTGGT
GGCTTTCCACCTAATATGGATCAGTCGTGGAATCCCATGAATGCTATGAA
TTTTAATCCTGCCCCAGGAATGTATGGCGATAATGTGAACAGTTATGCCA
CACCGAACCTTTACAACGGCGTCGGAGAGCCATCTATGAATATGTTCCAC
ATGCCCCAAATGATGGGACTTCAACCAAATTCCGGTCTTGCGCAAGGTCC
CGGAATAGGTCGATTTTCAAATCAACAGAGAACGACGTTCAGTACGCCAT
TTGCCAGGGAAGAAGACACGGCTTATTTCCGGCAACCTGTTAACCCACAA
CGGCACCAAGCGAGACACAGGAGGATACGGCCAAGTGACTATCGAGAACT
CTAAATGTCATCCTCTGTTCACTTCAAGTTCAAGTCTCAAAAGGAGCCTT
CAAGGGTGACTTTTGATGGCACCGGTATCTCTGTCTTCGAATTGAAAAGA
GAAATTATCAATCAGAGTAGACTGGGTGACGGGACTGACTTCGAGCTGTC
TATCTACAATGAAGATACTGGAGAAGAATACGATGATGACACCAGCATAA
TACCGCGTTCTACGTCCGTCATAGCTCGGAGATTACCTGCATCACGCCCG
GGTAAGGGTGGTGCTGCTCGTTATGTTTCCGGGAAAATGCCAGTCAATGC
GCGCAGTGCCCCCCGTAATGAACAATATCCCTTGACTCGGGCATCTCCCA
ATACTAGCAACGGTGTTCTAGAGCTCAACAATGCCCAGACGGAGGAAGAG
AAGATCAATGCACTCTTCAATTTGCAAGCAAACCAATGGAAAGAACAGCA
GCAGGAAATGGCAAACGCTACCCCTGTTCCATTCGGCCGTGGAAGGGGCA
GGCCTGTGAATGTTCCTGATCACCCCCCTCCCCCCGGCTACCTATGTTAC
CGCTGTCGCGAGAAAGGACACTGGATTCAAGCTTGCCCCACAAATAATGA
CCCAAAATTTGATGGGAAATATAGAGTTAAACGATCAACTGGTATACCTC
GTTCGTTACAAACCAAGGTTGAGAAGCCGGAATCCCTCACCCTGGACGGC
TCAAACGAGGATCCAAGGAACACAGGTGTCATGGTCAATGCCGATGGCGA
TTTTGTCATAGCCAAGCCTGACAAGGCAGCTTGGGAATTATACCAGGAGA
AAGCCAAAGCCTCCGCAGCAGCCGCGGCAGAAGCGGCAGCAGCAGAGTAC
AGCAAAGAACTGCAAGCACGTGGTTTAGAGTGTCCGATTGACAAGCGAAT
GTTTTTAGAGCCCACGAGAACTCCATGCTGTCAAAGAACATACTGCAATG
ATTGTATTACCAATGCATTGATCGAGAGCGATTTTGTATGCCCTGGCTGT
GGAACGGAGGGAGTGTTACTCGATAACCTTGCCGTTGATGACGAGGCTAT
TAGCAAGATTAAAGAGTACGAAGCTGAAAAGGCTGATTCGAAGAAAGAGA
AGGACAAGCAACAGGCAAATGACATTGGTCCGGGCATTGACAAAACAGCC
ATTCAAGGCAAAGGGCCTGTTGCAACAACGGAGTCCTTGCCACCAATTCC
GCCTAGTCAACCTGCTTCTAACAAAAGACCTGCAGAGGATGAAACTCCGC
GTACCGCTGTTGGTGGATCAAGCCCTAGTTCATTGTCCAAGAAATTGAAG
ACAAACGACAAGGCCGATTCACAAACTCCACAGGCTACTGGGCCTGTGAC
CGGGTTTCCAGCTTTTCCATTCGGCCAGCAGATGCCGTTCGGGAGTTTTG
GATTCATGCCGAACCAGGGTATGCCTGCGATGCCATTGTCTGATCCTATG
AACGCTATGGGTGTTCCTTCGTCTGGTGGCTTTCCACCTAATATGGATCA
GTCGTGGAATCCCATGAATGCTATGAATTTTAATCCTGCCCCAGGAATGT
ATGGCGATAATGTGAACAGTTATGCCACACCGAACCTTTACAACGGCGTC
GGAGAGCCATCTATGAATATGTTCCACATGCCCCAAATGATGGGACTTCA
ACCAAATTCCGGTCTTGCGCAAGGTCCCGGAATAGGTCGATTTTCAAATC
AACAGAGAACGACGTTCAGTACGCCATTTGCCAGGGAAGAAGACACGGCT
TATTTCCGGCAACCTGTTAACCCACAACGGCACCAAGCGAGACACAGGAG
GATACGGCCAAGTGACTATCGAGAACTCTAAATGTCATCCTCTGTTCACT
TCAAGTTCAAGTCTCAAAAGGAGCCTTCAAGGGTGACTTTTGATGGCACC
GGTATCTCTGTCTTCGAATTGAAAAGAGAAATTATCAATCAGAGTAGACT
GGGTGACGGGACTGACTTCGAGCTGTCTATCTACAATGAAGATACTGGAG
AAGAATACGATGATGACACCAGCATAATACCGCGTTCTACGTCCGTCATA
GCTCGGAGATTACCTGCATCACGCCCGGGTAAGGGTGGTGCTGCTCGTTA
TGTTTCCGGGAAAATGCCAGTCAATGCGCGCAGTGCCCCCCGTAATGAAC
AATATCCCTTGACTCGGGCATCTCCCAATACTAGCAACGGTGTTCTAGAG
CTCAACAATGCCCAGACGGAGGAAGAGAAGATCAATGCACTCTTCAATTT
GCAAGCAAACCAATGGAAAGAACAGCAGCAGGAAATGGCAAACGCTACCC
CTGTTCCATTCGGCCGTGGAAGGGGCAGGCCTGTGAATGTTCCTGATCAC
CCCCCTCCCCCCGGCTACCTATGTTACCGCTGTCGCGAGAAAGGACACTG
GATTCAAGCTTGCCCCACAAATAATGACCCAAAATTTGATGGGAAATATA
GAGTTAAACGATCAACTGGTATACCTCGTTCGTTACAAACCAAGGTTGAG
AAGCCGGAATCCCTCACCCTGGACGGCTCAAACGAGGATCCAAGGAACAC
AGGTGTCATGGTCAATGCCGATGGCGATTTTGTCATAGCCAAGCCTGACA
AGGCAGCTTGGGAATTATACCAGGAGAAAGCCAAAGCCTCCGCAGCAGCC
GCGGCAGAAGCGGCAGCAGCAGAGTACAGCAAAGAACTGCAAGCACGTGG
TTTAGAGTGTCCGATTGACAAGCGAATGTTTTTAGAGCCCACGAGAACTC
CATGCTGTCAAAGAACATACTGCAATGATTGTATTACCAATGCATTGATC
GAGAGCGATTTTGTATGCCCTGGCTGTGGAACGGAGGGAGTGTTACTCGA
TAACCTTGCCGTTGATGACGAGGCTATTAGCAAGATTAAAGAGTACGAAG
CTGAAAAGGCTGATTCGAAGAAAGAGAAGGACAAGCAACAGGCAAATGAC
ATTGGTCCGGGCATTGACAAAACAGCCATTCAAGGCAAAGGGCCTGTTGC
AACAACGGAGTCCTTGCCACCAATTCCGCCTAGTCAACCTGCTTCTAACA
AAAGACCTGCAGAGGATGAAACTCCGCGTACCGCTGTTGGTGGATCAAGC
CCTAGTTCATTGTCCAAGAAATTGAAGACAAACGACAAGGCCGATTCACA
AACTCCACAGGCTACTGGGCCTGTGACCGGGTTTCCAGCTTTTCCATTCG
GCCAGCAGATGCCGTTCGGGAGTTTTGGATTCATGCCGAACCAGGGTATG
CCTGCGATGCCATTGTCTGATCCTATGAACGCTATGGGTGTTCCTTCGTC
TGGTGGCTTTCCACCTAATATGGATCAGTCGTGGAATCCCATGAATGCTA
TGAATTTTAATCCTGCCCCAGGAATGTATGGCGATAATGTGAACAGTTAT
GCCACACCGAACCTTTACAACGGCGTCGGAGAGCCATCTATGAATATGTT
CCACATGCCCCAAATGATGGGACTTCAACCAAATTCCGGTCTTGCGCAAG
GTCCCGGAATAGGTCGATTTTCAAATCAACAGAGAACGACGTTCAGTACG
CCATTTGCCAGGGAAGAAGACACGGCTTATTTCCGGCAACCTGTTAACCC
ACAACGGCACCAAGCGAGACACAGGAGGATACGGCCAAGTGACTATCGAG
AACTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926357F |
| DBxref | InterPro:IPR036875 |
| DBxref | InterPro:IPR001878 |
| DBxref | InterPro:IPR025829 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR014891 |
| DBxref | PFAM:PF13696 |
| DBxref | PFAM:PF08783 |
| Product | retinoblastoma-binding protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851962.1 | supercontig | KZ851962.1:40055..42749 + |
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