|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851905.1:185817..188300+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_162661-T1 ID=M747DRAFT_162661-T1|Name=M747DRAFT_162661-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2484bp|location=Sequence derived from alignment at KZ851905.1:185817..188300+ (Aspergillus niger ATCC 13496)
TGCCTGTTCTTCCCCCGCACGTCACCTTAACTTTTCTCCTCTTCCTCGAG
CTTTGCTGAGCTTGCTGCCCCGGACGCGCTCGTCCCTCGGATCCTGCGCC
AGTTGAAAGTATTAAGAATTACTCTTTACCTTCTCCTACCTCTCCTACAG
CGCCGTCTTTCCCTTCCTATTCTTCCTTACTTCTTCTTTTCTTCTCTTTC
GTTAATAAGCTATTCATAACCCTTCCAGCACTGCAGTCCCTCTGAGCGCT
GTCAAGGCAAGCAAGCATGGCCAGTGAGGATAACGGCCAAGAGCCTATAA
AGCGCGATGTTCGCAATCACATTCTATTCGAGGTAGCTACGGAAGTGGCC
AACCGGGTGGGAGGCATTTACTCGGTGCTTAAGTCGAAAGCTCCCGTGAC
GACCGCAGAGTATGGCGACCGTTACACCCTGATCGGTCCTCTCAATCGTG
CTTCGGCAGCTGTGGAGGTCGAGGAGTTGACTCCGTCGAATCCCCGCATG
ATTGAGACCATCCAGTCCATGAAGGAGCGTGGGATCGAGATCGTCTACGG
TCGCTGGCTGATTGAGGGTGCTCCACGCGTGCTTCTTATCGATACAGGCA
CTGGCTACAAATATTTGGACGAGTGGAAAGGTGATCTCTGGAACGCAGCT
GGTATCCCGTCCCCTTCCGCCGATAGCGAGACCAACGAAGCCATTGTGTT
TGGCTACCTGGTGGCATGGTTCCTAGGCGAGGTACGTAACCTAAGCGCAT
GGACCGCTGACTGCACGTGCGTATATGCTAATGTTCATCTAACTAGTTCA
TCGCTCATGAGCGCCGCCGTGCGGTGGTGGCTCATTTTCACGAATGGCTT
GCTGGTGTCGCTTTGCCGCTGACCAAGAAGCGGCATATGGATCTGACAAC
AATTTTCACCACCCACGCGACCTTGCTCGGTCGGTATCTGTGCGCTGGGT
CTGTGGACTTCTATAACAATCTCCAGTACTTTGATGTTGACGCGGAAGCT
GGCAAACGTGGGATCTACCACCGCTACTGTATTGAGCGAGCTGCCGCACA
CACAGCTGACGTCTTCACGACTGTGTCCCATATCACGGCCTTTGAGAGTG
AGCATCTCCTTAAGCGGAAGCCTGATGGGGTGCTGCCCAACGGATTGAAC
GTGAAGAAGTTCTCGGCTGTACATGAATTCCAGAACCTACATTCGCAGTC
CAAGGAGAAGATCAATGACTTTGTGCGGGGGCATTTCTATGGTCACAACA
ACTTTGACTTGGACAATACCCTCTACGTATTTACAGCTGGACGCTATGAG
TTCCGAAACAAGGGTGTGGATATGTTCATCGAGGGCCTGGCGCGTTTGAA
TCACCGTCTGAAAGAGGCCGGTTCCAAGATGACCGTCGTCGCGTTTATCA
TCATGCCCGCTCAGACGTCATCCCTGACCGTCGAAGCTCTCAAGGGCCAA
GCTGTTGTGAAGTCTCTGAAGGACACAATCGAGATGATCGAGAAGGGCAT
TGGGAGGCGAATGTACGAGCGGTGTCTTGCGTGGAAGGAAGGCGACAACA
TGCCGGACGAGAAAGATCTGATGGCTAGCCAGGATCGTGTGCTACTGCGC
CGCAGGCTCTTCGCCATGAAGCGACACTCCCTGCCTCCGATTGTCACGCA
CAACATGTACAATGATCACGAAGACCCAATTCTGAACCAGATCCGTCGTG
TCCAACTTTTCAACCACGAGTCAGACCGGGTCAAGGTTGTCTTCCACCCG
GAGTTCCTGAACTCGTCCAACCCGGTGCTACCCTTGGACTATGACGACTT
CGTTCGGGGTACTCATCTCGGAGTGTTCCCCTCGTACTACGAGCCTTGGG
GATATACGCCGGCTGAATGCACCGTGATGGGTGTCCCGAGTATCACCACA
AACCTGTCTGGTTTCGGTTGCTATATGGAGGAACTAATTGAGAATTCGTC
CGACTACGGAATCTATATTGTGGACCGTCGGATGAAAGGCGTGGATGACT
CAGTCAATCAACTGACGGAATTCATGTTCAACTTCACCCAGAAGAGTCGG
CGCCAGCGGATCAACCAGCGGAACCGGACAGAGCGTCTGAGTGACCTCCT
GGACTGGAAACGCATGGGCCTTGAGTATGTCAAGGCTCGGCAGTTGGCAC
TCCGTCGAGGTATGTGTATTTCCAAGCCACTATTGATTAGATTGCTCACA
CGTTCATGCAGCCTATCCTTCGTCTTTCGGCACGCCTGATGATGTTTACG
ACGTAATCGGTGGCACGGAGCAGAAGATATCGCGACCATTATCCGTACCC
GGATCCCCGCGAGATCGTTCTGGTATGATGACTCCCGGGGATTTTGCCTC
TTTGCAGGAGGTGAAAGAAGGCCTGAGTACGGAGGACTATGTCGCATGGC
GACTGCCGTAAGTCCACCACCCCACCCCCTTGGGTGAATGAATGACACAA
GGAGCGCTGATGCTGATAAACTGGCTGTCTAGAA back to topCoding sequence (CDS) from alignment at KZ851905.1:185817..188300+ >M747DRAFT_162661-T1 ID=M747DRAFT_162661-T1|Name=M747DRAFT_162661-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6084bp|location=Sequence derived from alignment at KZ851905.1:185817..188300+ (Aspergillus niger ATCC 13496)
ATGGCCAGTGAGGATAACGGCCAAGAGCCTATAAAGCGCGATGTTCGCAA
TCACATTCTATTCGAGGTAGCTACGGAAGTGGCCAACCGGGTGGGAGGCA
TTTACTCGGTGCTTAAGTCGAAAGCTCCCGTGACGACCGCAGAGTATGGC
GACCGTTACACCCTGATCGGTCCTCTCAATCGTGCTTCGGCAGCTGTGGA
GGTCGAGGAGTTGACTCCGTCGAATCCCCGCATGATTGAGACCATCCAGT
CCATGAAGGAGCGTGGGATCGAGATCGTCTACGGTCGCTGGCTGATTGAG
GGTGCTCCACGCGTGCTTCTTATCGATACAGGCACTGGCTACAAATATTT
GGACGAGTGGAAAGGTGATCTCTGGAACGCAGCTGGTATCCCGTCCCCTT
CCGCCGATAGCGAGACCAACGAAGCCATTGTGTTTGGCTACCTGGTGGCA
TGGTTCCTAGGCGAGTTCATCGCTCATGAGCGCCGCCGTGCGGTGGTGGC
TCATTTTCACGAATGGCTTGCTGGTGTCGCTTTGCCGCTGACCAAGAAGC
GGCATATGGATCTGACAACAATTTTCACCACCCACGCGACCTTGCTCGGT
CGGTATCTGTGCGCTGGGTCTGTGGACTTCTATAACAATCTCCAGTACTT
TGATGTTGACGCGGAAGCTGGCAAACGTGGGATCTACCACCGCTACTGTA
TTGAGCGAGCTGCCGCACACACAGCTGACGTCTTCACGACTGTGTCCCAT
ATCACGGCCTTTGAGAGTGAGCATCTCCTTAAGCGGAAGCCTGATGGGGT
GCTGCCCAACGGATTGAACGTGAAGAAGTTCTCGGCTGTACATGAATTCC
AGAACCTACATTCGCAGTCCAAGGAGAAGATCAATGACTTTGTGCGGGGG
CATTTCTATGGTCACAACAACTTTGACTTGGACAATACCCTCTACGTATT
TACAGCTGGACGCTATGAGTTCCGAAACAAGGGTGTGGATATGTTCATCG
AGGGCCTGGCGCGTTTGAATCACCGTCTGAAAGAGGCCGGTTCCAAGATG
ACCGTCGTCGCGTTTATCATCATGCCCGCTCAGACGTCATCCCTGACCGT
CGAAGCTCTCAAGGGCCAAGCTGTTGTGAAGTCTCTGAAGGACACAATCG
AGATGATCGAGAAGGGCATTGGGAGGCGAATGTACGAGCGGTGTCTTGCG
TGGAAGGAAGGCGACAACATGCCGGACGAGAAAGATCTGATGGCTAGCCA
GGATCGTGTGCTACTGCGCCGCAGGCTCTTCGCCATGAAGCGACACTCCC
TGCCTCCGATTGTCACGCACAACATGTACAATGATCACGAAGACCCAATT
CTGAACCAGATCCGTCGTGTCCAACTTTTCAACCACGAGTCAGACCGGGT
CAAGGTTGTCTTCCACCCGGAGTTCCTGAACTCGTCCAACCCGGTGCTAC
CCTTGGACTATGACGACTTCGTTCGGGGTACTCATCTCGGAGTGTTCCCC
TCGTACTACGAGCCTTGGGGATATACGCCGGCTGAATGCACCGTGATGGG
TGTCCCGAGTATCACCACAAACCTGTCTGGTTTCGGTTGCTATATGGAGG
AACTAATTGAGAATTCGTCCGACTACGGAATCTATATTGTGGACCGTCGG
ATGAAAGGCGTGGATGACTCAGTCAATCAACTGACGGAATTCATGTTCAA
CTTCACCCAGAAGAGTCGGCGCCAGCGGATCAACCAGCGGAACCGGACAG
AGCGTCTGAGTGACCTCCTGGACTGGAAACGCATGGGCCTTGAGTATGTC
AAGGCTCGGCAGTTGGCACTCCGTCGAGCCTATCCTTCGTCTTTCGGCAC
GCCTGATGATGTTTACGACGTAATCGGTGGCACGGAGCAGAAGATATCGC
GACCATTATCCGTACCCGGATCCCCGCGAGATCGTTCTGGTATGATGACT
CCCGGGGATTTTGCCTCTTTGCAGGAGGTGAAAGAAGGCCTGAGTACGGA
GGACTATGTCGCATGGCGACTGCCGTAAATGGCCAGTGAGGATAACGGCC
AAGAGCCTATAAAGCGCGATGTTCGCAATCACATTCTATTCGAGGTAGCT
ACGGAAGTGGCCAACCGGGTGGGAGGCATTTACTCGGTGCTTAAGTCGAA
AGCTCCCGTGACGACCGCAGAGTATGGCGACCGTTACACCCTGATCGGTC
CTCTCAATCGTGCTTCGGCAGCTGTGGAGGTCGAGGAGTTGACTCCGTCG
AATCCCCGCATGATTGAGACCATCCAGTCCATGAAGGAGCGTGGGATCGA
GATCGTCTACGGTCGCTGGCTGATTGAGGGTGCTCCACGCGTGCTTCTTA
TCGATACAGGCACTGGCTACAAATATTTGGACGAGTGGAAAGGTGATCTC
TGGAACGCAGCTGGTATCCCGTCCCCTTCCGCCGATAGCGAGACCAACGA
AGCCATTGTGTTTGGCTACCTGGTGGCATGGTTCCTAGGCGAGTTCATCG
CTCATGAGCGCCGCCGTGCGGTGGTGGCTCATTTTCACGAATGGCTTGCT
GGTGTCGCTTTGCCGCTGACCAAGAAGCGGCATATGGATCTGACAACAAT
TTTCACCACCCACGCGACCTTGCTCGGTCGGTATCTGTGCGCTGGGTCTG
TGGACTTCTATAACAATCTCCAGTACTTTGATGTTGACGCGGAAGCTGGC
AAACGTGGGATCTACCACCGCTACTGTATTGAGCGAGCTGCCGCACACAC
AGCTGACGTCTTCACGACTGTGTCCCATATCACGGCCTTTGAGAGTGAGC
ATCTCCTTAAGCGGAAGCCTGATGGGGTGCTGCCCAACGGATTGAACGTG
AAGAAGTTCTCGGCTGTACATGAATTCCAGAACCTACATTCGCAGTCCAA
GGAGAAGATCAATGACTTTGTGCGGGGGCATTTCTATGGTCACAACAACT
TTGACTTGGACAATACCCTCTACGTATTTACAGCTGGACGCTATGAGTTC
CGAAACAAGGGTGTGGATATGTTCATCGAGGGCCTGGCGCGTTTGAATCA
CCGTCTGAAAGAGGCCGGTTCCAAGATGACCGTCGTCGCGTTTATCATCA
TGCCCGCTCAGACGTCATCCCTGACCGTCGAAGCTCTCAAGGGCCAAGCT
GTTGTGAAGTCTCTGAAGGACACAATCGAGATGATCGAGAAGGGCATTGG
GAGGCGAATGTACGAGCGGTGTCTTGCGTGGAAGGAAGGCGACAACATGC
CGGACGAGAAAGATCTGATGGCTAGCCAGGATCGTGTGCTACTGCGCCGC
AGGCTCTTCGCCATGAAGCGACACTCCCTGCCTCCGATTGTCACGCACAA
CATGTACAATGATCACGAAGACCCAATTCTGAACCAGATCCGTCGTGTCC
AACTTTTCAACCACGAGTCAGACCGGGTCAAGGTTGTCTTCCACCCGGAG
TTCCTGAACTCGTCCAACCCGGTGCTACCCTTGGACTATGACGACTTCGT
TCGGGGTACTCATCTCGGAGTGTTCCCCTCGTACTACGAGCCTTGGGGAT
ATACGCCGGCTGAATGCACCGTGATGGGTGTCCCGAGTATCACCACAAAC
CTGTCTGGTTTCGGTTGCTATATGGAGGAACTAATTGAGAATTCGTCCGA
CTACGGAATCTATATTGTGGACCGTCGGATGAAAGGCGTGGATGACTCAG
TCAATCAACTGACGGAATTCATGTTCAACTTCACCCAGAAGAGTCGGCGC
CAGCGGATCAACCAGCGGAACCGGACAGAGCGTCTGAGTGACCTCCTGGA
CTGGAAACGCATGGGCCTTGAGTATGTCAAGGCTCGGCAGTTGGCACTCC
GTCGAGCCTATCCTTCGTCTTTCGGCACGCCTGATGATGTTTACGACGTA
ATCGGTGGCACGGAGCAGAAGATATCGCGACCATTATCCGTACCCGGATC
CCCGCGAGATCGTTCTGGTATGATGACTCCCGGGGATTTTGCCTCTTTGC
AGGAGGTGAAAGAAGGCCTGAGTACGGAGGACTATGTCGCATGGCGACTG
CCGTAAATGGCCAGTGAGGATAACGGCCAAGAGCCTATAAAGCGCGATGT
TCGCAATCACATTCTATTCGAGGTAGCTACGGAAGTGGCCAACCGGGTGG
GAGGCATTTACTCGGTGCTTAAGTCGAAAGCTCCCGTGACGACCGCAGAG
TATGGCGACCGTTACACCCTGATCGGTCCTCTCAATCGTGCTTCGGCAGC
TGTGGAGGTCGAGGAGTTGACTCCGTCGAATCCCCGCATGATTGAGACCA
TCCAGTCCATGAAGGAGCGTGGGATCGAGATCGTCTACGGTCGCTGGCTG
ATTGAGGGTGCTCCACGCGTGCTTCTTATCGATACAGGCACTGGCTACAA
ATATTTGGACGAGTGGAAAGGTGATCTCTGGAACGCAGCTGGTATCCCGT
CCCCTTCCGCCGATAGCGAGACCAACGAAGCCATTGTGTTTGGCTACCTG
GTGGCATGGTTCCTAGGCGAGTTCATCGCTCATGAGCGCCGCCGTGCGGT
GGTGGCTCATTTTCACGAATGGCTTGCTGGTGTCGCTTTGCCGCTGACCA
AGAAGCGGCATATGGATCTGACAACAATTTTCACCACCCACGCGACCTTG
CTCGGTCGGTATCTGTGCGCTGGGTCTGTGGACTTCTATAACAATCTCCA
GTACTTTGATGTTGACGCGGAAGCTGGCAAACGTGGGATCTACCACCGCT
ACTGTATTGAGCGAGCTGCCGCACACACAGCTGACGTCTTCACGACTGTG
TCCCATATCACGGCCTTTGAGAGTGAGCATCTCCTTAAGCGGAAGCCTGA
TGGGGTGCTGCCCAACGGATTGAACGTGAAGAAGTTCTCGGCTGTACATG
AATTCCAGAACCTACATTCGCAGTCCAAGGAGAAGATCAATGACTTTGTG
CGGGGGCATTTCTATGGTCACAACAACTTTGACTTGGACAATACCCTCTA
CGTATTTACAGCTGGACGCTATGAGTTCCGAAACAAGGGTGTGGATATGT
TCATCGAGGGCCTGGCGCGTTTGAATCACCGTCTGAAAGAGGCCGGTTCC
AAGATGACCGTCGTCGCGTTTATCATCATGCCCGCTCAGACGTCATCCCT
GACCGTCGAAGCTCTCAAGGGCCAAGCTGTTGTGAAGTCTCTGAAGGACA
CAATCGAGATGATCGAGAAGGGCATTGGGAGGCGAATGTACGAGCGGTGT
CTTGCGTGGAAGGAAGGCGACAACATGCCGGACGAGAAAGATCTGATGGC
TAGCCAGGATCGTGTGCTACTGCGCCGCAGGCTCTTCGCCATGAAGCGAC
ACTCCCTGCCTCCGATTGTCACGCACAACATGTACAATGATCACGAAGAC
CCAATTCTGAACCAGATCCGTCGTGTCCAACTTTTCAACCACGAGTCAGA
CCGGGTCAAGGTTGTCTTCCACCCGGAGTTCCTGAACTCGTCCAACCCGG
TGCTACCCTTGGACTATGACGACTTCGTTCGGGGTACTCATCTCGGAGTG
TTCCCCTCGTACTACGAGCCTTGGGGATATACGCCGGCTGAATGCACCGT
GATGGGTGTCCCGAGTATCACCACAAACCTGTCTGGTTTCGGTTGCTATA
TGGAGGAACTAATTGAGAATTCGTCCGACTACGGAATCTATATTGTGGAC
CGTCGGATGAAAGGCGTGGATGACTCAGTCAATCAACTGACGGAATTCAT
GTTCAACTTCACCCAGAAGAGTCGGCGCCAGCGGATCAACCAGCGGAACC
GGACAGAGCGTCTGAGTGACCTCCTGGACTGGAAACGCATGGGCCTTGAG
TATGTCAAGGCTCGGCAGTTGGCACTCCGTCGAGCCTATCCTTCGTCTTT
CGGCACGCCTGATGATGTTTACGACGTAATCGGTGGCACGGAGCAGAAGA
TATCGCGACCATTATCCGTACCCGGATCCCCGCGAGATCGTTCTGGTATG
ATGACTCCCGGGGATTTTGCCTCTTTGCAGGAGGTGAAAGAAGGCCTGAG
TACGGAGGACTATGTCGCATGGCGACTGCCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005978 | glycogen biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004373 | glycogen (starch) synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT3 |
| DBxref | InterPro:IPR008631 |
| DBxref | PFAM:PF05693 |
| Product | glycogen synthase isoform 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851905.1 | supercontig | KZ851905.1:185817..188300 + |
|
