You are here

Home

M747DRAFT_169576-T1, M747DRAFT_169576-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_169576-T1
Unique NameM747DRAFT_169576-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851973.1:27636..28930-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_169576-T1 ID=M747DRAFT_169576-T1|Name=M747DRAFT_169576-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1295bp|location=Sequence derived from alignment at KZ851973.1:27636..28930- (Aspergillus niger ATCC 13496)
TGACCCAGCGCAATGCGCGATAATATCTTGAAACCCCGCGGCATCAAGTC
AACCATCGTCCCCGCTGCCACCCAGGGCTGCCCAGCCTTACCCTATCCCG
CAAAAATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAA
GAAATTGAAGCCATCAATGCCATCTACGAACCGGACACCCTCACCATCAC
TAACACCTCTACCTCGACCGGCCCCTCAACTCTCGATCTCGGCGGCTCCG
GCTCCTCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTTCAACTTCCG
GAACACCCTCACTTGTCCTTCCTCCTCGGATTCAACTCAACATATCCCGA
CACCCCGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGG
GCAAGCTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAG
CCGGGTGCGGTATGTCTATTCGACCTGATCAATGAAGCCGTCCAGGCATT
CACGGAGCTCAATATTGGTGGCAGCGCTACAACCACCACTACCAACAACA
ATGACACAACTTCCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAA
AACGGCAGCCATCAACCGCTAACCACAAGATCAACAACCCCCGACCATCA
CACATTTAACCTCACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCA
CGGAAAAGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTG
GACCAGGCAAAGGCGTTCCTGGATCATCTGCTCGCGACGGAGAAAAAGGT
TGCGTCCGCGACGCATAATATCAGTGCGTGGAGGATTCGCGAGGTGAAAT
CATCTACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATG
ATTGTGCAGGATTGTGATGATGATGGGGAGACAGCTGCTGGAGGTCGACT
ACTGCATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGA
CGAGATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATC
AATGCGGCCGGAAGGGATGCGCTGGTCAAGGGGGGTTTTGTTAAAGAGAA
GACAGCTGGGGAGAAGGGAAAGAAGAAGGGAAAGAAATGATTGGAAGCAT
GGTGGGTGGAGGTGCTATTGCTTGTGAATTGGGTAGGCCCGTTGTGGTGC
ACTCTCCTTACGAGACGCAAAATGGTCCGCGGAGATTTGGGGAATCGATG
ACTCCTTGAACGGGCCGGTATGCGTGCGGTTAGTGATGTGCGCTG
back to top

Coding sequence (CDS) from alignment at KZ851973.1:27636..28930-

>M747DRAFT_169576-T1 ID=M747DRAFT_169576-T1|Name=M747DRAFT_169576-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1128bp|location=Sequence derived from alignment at KZ851973.1:27636..28930- (Aspergillus niger ATCC 13496)
ATGCGCGATAATATCTTGAAACCCCGCGGCATCAAGTCAACCATCGTCCC
CGCTGCCACCCAGGGCTGCCCAGCCTTACCCTATCCCGCAAAAATGGATT
CGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAATTGAAGCC
ATCAATGCCATCTACGAACCGGACACCCTCACCATCACTAACACCTCTAC
CTCGACCGGCCCCTCAACTCTCGATCTCGGCGGCTCCGGCTCCTCAGACT
CTTCTCCTCCTTCAACAACAATAAAGCTTCAACTTCCGGAACACCCTCAC
TTGTCCTTCCTCCTCGGATTCAACTCAACATATCCCGACACCCCGCCCAA
AATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAGCTCGCCG
TCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGGTGCGGTA
TGTCTATTCGACCTGATCAATGAAGCCGTCCAGGCATTCACGGAGCTCAA
TATTGGTGGCAGCGCTACAACCACCACTACCAACAACAATGACACAACTT
CCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAAAACGGCAGCCAT
CAACCGCTAACCACAAGATCAACAACCCCCGACCATCACACATTTAACCT
CACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCACGGAAAAGAAAT
CCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACCAGGCAAAG
GCGTTCCTGGATCATCTGCTCGCGACGGAGAAAAAGGTTGCGTCCGCGAC
GCATAATATCAGTGCGTGGAGGATTCGCGAGGTGAAATCATCTACTTCTA
CTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTGTGCAGGAT
TGTGATGATGATGGGGAGACAGCTGCTGGAGGTCGACTACTGCATTTGAT
GCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACGAGATGGTATG
GCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATGCGGCCGGA
AGGGATGCGCTGGTCAAGGGGGGTTTTGTTAAAGAGAAGACAGCTGGGGA
GAAGGGAAAGAAGAAGGGAAAGAAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_169576M747DRAFT_169576Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_169576-T1.cdsM747DRAFT_169576-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_169576-T1.utr3p1M747DRAFT_169576-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_169576-T1.exon1M747DRAFT_169576-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_169576-T1.utr5p1M747DRAFT_169576-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_169576-T1M747DRAFT_169576-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519731.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020569
DBxrefInterPro:IPR036956
DBxrefInterPro:IPR006575
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR001498
DBxrefPFAM:PF01205
DBxrefPFAM:PF05773
ProductUPF0029-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851973.1supercontigKZ851973.1:27636..28930 -
Powered by Drupal