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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851973.1:34557..36428- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_169607-T1 ID=M747DRAFT_169607-T1|Name=M747DRAFT_169607-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1872bp|location=Sequence derived from alignment at KZ851973.1:34557..36428- (Aspergillus niger ATCC 13496)
CAACATCCATCCGTTTCACCGCCATTACTTTTCCATCCACCTAATTTGAC
ATCATGTCCTCTGCTCTGGATCGCTCCAGTCGACCACCCATTGGAAGTAT
ACGTCGAAGGACGAAAAAGGCGTGTGAAACCTGCAAGTTGCGTAAGCGGA
AATGTGACGGTCATGAGCCATGCTCATTCTGCCTCAAATACGAATATGAC
TGCGCGTACGAGGCTCAACCACGGAAGAAGCCATCAAGGCCAAGCATTGC
AAGGCCTTCGACCAAGCCCCTTGAAAGGGCATCCTCTCCAGCACTTGCGG
CAAGGGCTGATGTCAATCAACAGCAGATGGAGGCGAACTCAGGCACGGCA
TTCCCTCACTTTTTGGGAAAGAGCTTGAACCCGCAGAACCCTCCAAAGGT
GCACGGCTTCAGCTGGAACCTAGGGCTTCGACATGAGCCCATACAACAAT
TCGCTAACATCTCGAGCCTAGTCTCTAAAGATGAGATGAGTGCTCTTGTT
GGCCATTATCTAGAACGTATACACCCCATATATGCTGTTCTCGATCTTGA
TATGCTAGAGAAAAAGGTCGGACTGCGCTGGGATAATTCTATCACTTTTG
ACAGCTATGATCCAGTTCTTTGCGGTGTTGCGGCCTTGGGATCGCTTTAC
TCAGGCGATAATGGACATAGGAACGAAGAAGCGCTGGTCCAGTGCGCAAA
GGAAATCTTGGAAGCAACCTGTACTATGAATAAACCACTCATACACCATG
CTACTGGATGGGTCTTACGTACCCTCTACCTGCGAAGCACCGGCTGTCCT
CATACCTCATGGATGGCCAGCTGCTCTGCAATGCACATCATCGAAGCAGC
AGGGGCACATCAGGATCCAGGGATGATCTCTCTGGTGTATTCTGACACGG
CGGATGTTGGTGTCGATGAAGAAAGTCAGCGCAGGCTATTTTGGGTTGCG
ACGGTTCTAAATACGTGGATCTCGTATGAATATGGCAGGTCTCGCGTCAT
CTTACGAGGCATTTCCTGCAAGCCACCTGTGCCACGAGCGGGAGATTTGA
CTGCGGAACTGGTCTCATTGTTCCAGATTTCTCAGCGGCTGGATCCCGAT
CAGAACAATAGACCTTCAGACCTTGAAGATGTATTATATCACGTCCAAAG
TCTAACTCTTAGCCACGATGCCTTGGTTCTGTCCCAAGCTAATCTAGCAC
TTACGATATACCGTCGTCTCCGTGTGGCTGCTTCCAGTATTTCAAACGAT
GTCATAAACTGCGTCATTCGAATGGGCAGTGACGGTACTGCTGCTGCGGT
CCGTATGTCTGAGAATCGCAGTCCTTGGTGGCATGTTGCCAATGTTCCCT
TTCAGTTTCTCTGCATCTTGCTCGCAATAGATTCTAAGGAGTCATTGTCA
CACGTGGGCCACGCCATGCGCTCATTCAAGACTATTGGGAGCCACTTTAA
TACGCCTACTGTCCACATCGCTATAGAGACCGTCGATTCCTTAATCAAGC
TGTTACAAAGGAAGAAAGAGCGGGAAATTAATCTTCTAAGGGATAGCATC
CAGGATCAGGACTCAGGACCGTTTGAACGAAACTTATCATCTACGCAAGA
GTACGGTTCGCCATTGCAAGGAGGCTTATTCGATGGAAACAATCTAGAAA
TGATAGACTGGGATTGGAACGCCTTTTTCGATGCCGAAATACCACTCTTT
GACGACAGGGGGCATGGCGGGCAGATGAGGTATGGGTAACGGTCGTTGTG
ACCGTCATGCTAGGGAGATAACCACAGTACTCCCGCTTACAAGGTCCAAC
AATTACTAGCAGGACATTATTACCCATGCGTTGATCTGGCTACCCACATG
CAAACACTTCACTATGCTTTCG back to topCoding sequence (CDS) from alignment at KZ851973.1:34557..36428- >M747DRAFT_169607-T1 ID=M747DRAFT_169607-T1|Name=M747DRAFT_169607-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1686bp|location=Sequence derived from alignment at KZ851973.1:34557..36428- (Aspergillus niger ATCC 13496)
ATGTCCTCTGCTCTGGATCGCTCCAGTCGACCACCCATTGGAAGTATACG
TCGAAGGACGAAAAAGGCGTGTGAAACCTGCAAGTTGCGTAAGCGGAAAT
GTGACGGTCATGAGCCATGCTCATTCTGCCTCAAATACGAATATGACTGC
GCGTACGAGGCTCAACCACGGAAGAAGCCATCAAGGCCAAGCATTGCAAG
GCCTTCGACCAAGCCCCTTGAAAGGGCATCCTCTCCAGCACTTGCGGCAA
GGGCTGATGTCAATCAACAGCAGATGGAGGCGAACTCAGGCACGGCATTC
CCTCACTTTTTGGGAAAGAGCTTGAACCCGCAGAACCCTCCAAAGGTGCA
CGGCTTCAGCTGGAACCTAGGGCTTCGACATGAGCCCATACAACAATTCG
CTAACATCTCGAGCCTAGTCTCTAAAGATGAGATGAGTGCTCTTGTTGGC
CATTATCTAGAACGTATACACCCCATATATGCTGTTCTCGATCTTGATAT
GCTAGAGAAAAAGGTCGGACTGCGCTGGGATAATTCTATCACTTTTGACA
GCTATGATCCAGTTCTTTGCGGTGTTGCGGCCTTGGGATCGCTTTACTCA
GGCGATAATGGACATAGGAACGAAGAAGCGCTGGTCCAGTGCGCAAAGGA
AATCTTGGAAGCAACCTGTACTATGAATAAACCACTCATACACCATGCTA
CTGGATGGGTCTTACGTACCCTCTACCTGCGAAGCACCGGCTGTCCTCAT
ACCTCATGGATGGCCAGCTGCTCTGCAATGCACATCATCGAAGCAGCAGG
GGCACATCAGGATCCAGGGATGATCTCTCTGGTGTATTCTGACACGGCGG
ATGTTGGTGTCGATGAAGAAAGTCAGCGCAGGCTATTTTGGGTTGCGACG
GTTCTAAATACGTGGATCTCGTATGAATATGGCAGGTCTCGCGTCATCTT
ACGAGGCATTTCCTGCAAGCCACCTGTGCCACGAGCGGGAGATTTGACTG
CGGAACTGGTCTCATTGTTCCAGATTTCTCAGCGGCTGGATCCCGATCAG
AACAATAGACCTTCAGACCTTGAAGATGTATTATATCACGTCCAAAGTCT
AACTCTTAGCCACGATGCCTTGGTTCTGTCCCAAGCTAATCTAGCACTTA
CGATATACCGTCGTCTCCGTGTGGCTGCTTCCAGTATTTCAAACGATGTC
ATAAACTGCGTCATTCGAATGGGCAGTGACGGTACTGCTGCTGCGGTCCG
TATGTCTGAGAATCGCAGTCCTTGGTGGCATGTTGCCAATGTTCCCTTTC
AGTTTCTCTGCATCTTGCTCGCAATAGATTCTAAGGAGTCATTGTCACAC
GTGGGCCACGCCATGCGCTCATTCAAGACTATTGGGAGCCACTTTAATAC
GCCTACTGTCCACATCGCTATAGAGACCGTCGATTCCTTAATCAAGCTGT
TACAAAGGAAGAAAGAGCGGGAAATTAATCTTCTAAGGGATAGCATCCAG
GATCAGGACTCAGGACCGTTTGAACGAAACTTATCATCTACGCAAGAGTA
CGGTTCGCCATTGCAAGGAGGCTTATTCGATGGAAACAATCTAGAAATGA
TAGACTGGGATTGGAACGCCTTTTTCGATGCCGAAATACCACTCTTTGAC
GACAGGGGGCATGGCGGGCAGATGAGGTATGGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519731.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851973.1 | supercontig | KZ851973.1:34557..36428 - |
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