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M747DRAFT_173071-T1, M747DRAFT_173071-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_173071-T1
Unique NameM747DRAFT_173071-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:353369..354892-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_173071-T1 ID=M747DRAFT_173071-T1|Name=M747DRAFT_173071-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1524bp|location=Sequence derived from alignment at KZ851906.1:353369..354892- (Aspergillus niger ATCC 13496)
GGACACCTTCTTCTACCTTGGCCGGATCTCACGCTCATTGCCACACTCGA
CGGGTTTCCAATTCTCAGATCACATCCGCCAATACATCGTCATCGACTCG
AGAATTAAAAGCACAGAAGGGCCTTCTCTGCTACCATCCGTATACTCCAC
CGGGACCTTGGAAGTCATCGTCGCATCGCGTCCTGAACAGCATCCTCCCA
TCGCGGACGCTTCCATATAACATTTCGCGATCTCGTTCGAACCACATTCA
TGGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATATACCTAC
CCTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATATTCTGGG
CGACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATTGTATGTCTTCAAT
TCGTCCTCGTGCGGTGGTTAGGATCCGCTGCTAATCACCTTTTCTTCGTT
TAGTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACA
TGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCT
GCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTAT
AACATAGCGGTATGTTACCATCCCTCCTGAATCAATCTTTTGACAACCCT
TCGTACTGATTTATGGCAGATCGTGGGGTATCTTTCCGCTGGTCTTGTTA
TCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCG
CAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTGTAAGTGA
TAACCAGCTCCGACACACATACCCACTAGGCAGTACGTGACTTACCATTA
ATGCAGATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCA
TCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGT
ACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACG
ACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTT
CGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCG
AACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAAT
CTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCC
GTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCA
ATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGC
GGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCC
ATCCAACTACCTGATCTTGCTGTGATCGATGCAGAGCAACCCACGGTGTC
ACGTCCTTTCCTTCCTTCTGTCTTTTTTGGTCTGTCATGGTTCTCGCCGT
TTTGTTGCGAGAGAAAAATCAGTTTTTGATACCCTTCGAGTAGTATCACT
CGGCGTGATTCTGGTTTGCGAAGT
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Coding sequence (CDS) from alignment at KZ851906.1:353369..354892-

>M747DRAFT_173071-T1 ID=M747DRAFT_173071-T1|Name=M747DRAFT_173071-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3744bp|location=Sequence derived from alignment at KZ851906.1:353369..354892- (Aspergillus niger ATCC 13496)
ATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGG
CTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAA
ATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCC
AGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGAC
CTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACC
GCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCC
AACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCG
TGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGA
TCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGA
TGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAA
CTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTA
TCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCG
CAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTTG
GTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATC
CCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGC
ATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGAT
GGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATATACCTACC
CTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATATTCTGGGC
GACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATTATCATTTGGATTTT
CTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCAT
TTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATG
TCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCA
GATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGT
CGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAG
CCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACC
AGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCT
ATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCAAG
CATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAG
GAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTTGC
TGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCC
ATCAACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGC
TGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTTGGTTGATCGCATTTA
TCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGG
TGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTT
CGGCACCGATACTGGTGCCGTCTATAACATAGCGATGGTGGCTTACTCTT
CGCGTTCCCCCTCCTTCCAGAAGCCATATACCTACCCTGAGCCTCCACGA
AAAATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCT
CGCAAGCACGTCCATCTCCATTATCATTTGGATTTTCTACTTCGGATCTA
GCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAG
GAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATGTCAACTGCATTCGG
CAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCCG
CTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGA
GGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAA
CCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCC
AGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCC
AACCCTGAAGATGCCAATGAGATCAGTTTCACCAAGCATGAGATCTTGGA
GGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAG
AGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTGTGAATCGTGGGG
TATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAGT
CTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTT
TGGCTATGGTTATTTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTC
ACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTA
CTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTG
GTGCCGTCTATAACATAGCGATGGTGGCTTACTCTTCGCGTTCCCCCTCC
TTCCAGAAGCCATATACCTACCCTGAGCCTCCACGAAAAATGGCGCGCTT
CAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAAGCACGTCCA
TCTCCATTATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCG
CATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTC
GTACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGA
CGACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGC
TTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTC
CGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGA
ATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATAT
CCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGC
CAATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGA
GCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCT
CCATCCAACTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGG
TCTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCG
CCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATT
TTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGG
CGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCA
TTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAAC
ATAGCGATGGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATA
TACCTACCCTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATA
TTCTGGGCGACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SHO1M747DRAFT_173071Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173071-T1M747DRAFT_173071-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173071-T1.cdsM747DRAFT_173071-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173071-T1.utr3p1M747DRAFT_173071-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173071-T1.exon4M747DRAFT_173071-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_173071-T1.exon3M747DRAFT_173071-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_173071-T1.exon2M747DRAFT_173071-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_173071-T1.exon1M747DRAFT_173071-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173071-T1.utr5p1M747DRAFT_173071-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR035522
DBxrefInterPro:IPR001452
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductTransmembrane osmosensor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:353369..354892 -
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