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M747DRAFT_177909-T1, M747DRAFT_177909-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_177909-T1
Unique NameM747DRAFT_177909-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851986.1:22710..24672+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_177909-T1 ID=M747DRAFT_177909-T1|Name=M747DRAFT_177909-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1963bp|location=Sequence derived from alignment at KZ851986.1:22710..24672+ (Aspergillus niger ATCC 13496)
CACGCAATACGAAACACCAGGAGAAATAGATTGATTACTCATAATCATTG
ACTCTAGCCTACTCGGCCATTGTGAGCCTTATCGCCGAGACCTAAGCCAT
ATCCATTTATTGCCACCAGACAAAGAGGCGGCCCTGACAAATCATTTGCA
CGTGTGTCTGCCAACATTATTGCCAAACATCTGTTCCATTGACTTCCATA
TCACCATCTCATCAGCGTACAAACGTTCTTTCGCCTTCAAACAGACGACT
GCCTGAAACTGACCTCAGAAGCAGATTTCGTGTATTTATTCTCAGCTAGT
CGTCCCACCCCGTATTCCGCTCACCTTTCTACTGTGAAGCAATTCAACCA
TCAGATTGTTCTAGGCGATGACCTCATTCACTGCTGCTTCTTTGACCAGT
CGTGGTGATAAGGTCAATATGAGTCGTCTGCCGTCTGTTTCGAGTTTAAT
GTCCCCCCCAGAGTCCAAACCTCTCGAGAGCTTCAGTCCCACCACAATTT
CACCGTATACAATGTCCCAGGATCCGTCGTATAGCCATGATGTGAGGCTG
CCTCCTATGCCGAGTGATCACAAGCGAACACAGTCAGAAATGGACTTGCC
ATCGCCGCCGGTCACTCCCTATACTGGGAATAAGAAACGGCGATCGAATG
GATCAGAACCGATTGACAAGGATGCCGTCGTCGGTTCCTCTAGGGACCCT
GTTCTCTTCCCCCGCCACGAAGGCCTTACTGATATTGCCACTGATGAGCC
ATTGTTTGGGTCCATGCTCCCTCCGTCTGCGGAAGCGCTGGTTGACCAAC
ATATAAATTCTCACATGGCGAGATTTGAGAATAAACTTAACAAGCCGACG
CGTGACGAATATCTTCTAGCCCTTTCATGCGTACCGATTGTATCTGCTCA
ATTTAACCGGAACCCAGCAGCATGGGCTAGGGAAGAGCGGGAGACTTTAG
AACGCCAGCTTTTGATGATGAATCGGTGTCGTCCACGTGCTATAGATGCG
AAACTGAAGAAGATTGCACCGGCTCCTGCAAAGAGGGCAGTTGCTGCCCA
GCCTCGTCTGCAACGCACACCCAGGGTAAAGCGGACACCCAAGTCCACAC
CGAAGCAAAGGATCCTCGACACATTTGACTCACCCCCGTCGAGTGCCAAG
CCGCCTCGCGCCATAGGCACAAACCGGGATGACACAGATTACAATTCCAT
CAAGGACTATTCTCCTTCAATAGAGACCCTAGGAGGCAACGCAAAGGCAC
TAAAGGCAGACTGGAAAGGCCAAGTGTTAGATCTTAGCCATGATCCGGAC
CGGCACTTGCTGAGCTCTGCAGAGCTCAACCTTGCTGCTACTTTAAGGCT
GTCATGTGCGACCTATCTATGCAGCAAGCGTCGCATTTTCGAAGCCCGGG
TGAAGGCTTTGAATGTTGGTAAGGAATTTCGGAAGACCGATGCTCAGCAG
GCTTGCAAAATTGATGTCAATAAAGCAAGCAAGCTCTGGACGGCGTATGA
GCGGGTTGGTTGGTTTGATCCCGAACATTTCCGACAGTATCGAAGATGAT
ATGCTTGGAACTGTCGAACCCTGCGGATCCCGATGGTCTGCCCCATTGAT
ATACTGGTAACACCCACTATGATGCGTTAGAGACATGGTCACATGTCTGT
ATTATCATCAGCCCAAATGCATTTCTCAACTCACAATTTTCGCTCCCGTC
AATTAGCCATCGGATATTGATATGGTACTTACGTTTGTCACTGAGCATAG
CTGGATTCTCTGCAACAAGTGGCAAGGCTGCATACGGTGTTATATTGCTC
TTCCACTTTCCCATTCCCCTTCGTTGCGTTAGCCGTTAAATTCGGATGGT
ATCGATTTGATTTAACACTTGGCGTCTTCAGACACCTTTCAATCACCCTT
ATTCTTTTCCGGCGTTATTGTCTTTAAAGGGCTGGAACAATTGGCTTTGA
TGGGTTAGGTTTT
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Coding sequence (CDS) from alignment at KZ851986.1:22710..24672+

>M747DRAFT_177909-T1 ID=M747DRAFT_177909-T1|Name=M747DRAFT_177909-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1182bp|location=Sequence derived from alignment at KZ851986.1:22710..24672+ (Aspergillus niger ATCC 13496)
ATGACCTCATTCACTGCTGCTTCTTTGACCAGTCGTGGTGATAAGGTCAA
TATGAGTCGTCTGCCGTCTGTTTCGAGTTTAATGTCCCCCCCAGAGTCCA
AACCTCTCGAGAGCTTCAGTCCCACCACAATTTCACCGTATACAATGTCC
CAGGATCCGTCGTATAGCCATGATGTGAGGCTGCCTCCTATGCCGAGTGA
TCACAAGCGAACACAGTCAGAAATGGACTTGCCATCGCCGCCGGTCACTC
CCTATACTGGGAATAAGAAACGGCGATCGAATGGATCAGAACCGATTGAC
AAGGATGCCGTCGTCGGTTCCTCTAGGGACCCTGTTCTCTTCCCCCGCCA
CGAAGGCCTTACTGATATTGCCACTGATGAGCCATTGTTTGGGTCCATGC
TCCCTCCGTCTGCGGAAGCGCTGGTTGACCAACATATAAATTCTCACATG
GCGAGATTTGAGAATAAACTTAACAAGCCGACGCGTGACGAATATCTTCT
AGCCCTTTCATGCGTACCGATTGTATCTGCTCAATTTAACCGGAACCCAG
CAGCATGGGCTAGGGAAGAGCGGGAGACTTTAGAACGCCAGCTTTTGATG
ATGAATCGGTGTCGTCCACGTGCTATAGATGCGAAACTGAAGAAGATTGC
ACCGGCTCCTGCAAAGAGGGCAGTTGCTGCCCAGCCTCGTCTGCAACGCA
CACCCAGGGTAAAGCGGACACCCAAGTCCACACCGAAGCAAAGGATCCTC
GACACATTTGACTCACCCCCGTCGAGTGCCAAGCCGCCTCGCGCCATAGG
CACAAACCGGGATGACACAGATTACAATTCCATCAAGGACTATTCTCCTT
CAATAGAGACCCTAGGAGGCAACGCAAAGGCACTAAAGGCAGACTGGAAA
GGCCAAGTGTTAGATCTTAGCCATGATCCGGACCGGCACTTGCTGAGCTC
TGCAGAGCTCAACCTTGCTGCTACTTTAAGGCTGTCATGTGCGACCTATC
TATGCAGCAAGCGTCGCATTTTCGAAGCCCGGGTGAAGGCTTTGAATGTT
GGTAAGGAATTTCGGAAGACCGATGCTCAGCAGGCTTGCAAAATTGATGT
CAATAAAGCAAGCAAGCTCTGGACGGCGTATGAGCGGGTTGGTTGGTTTG
ATCCCGAACATTTCCGACAGTATCGAAGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_177909M747DRAFT_177909Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_177909-T1M747DRAFT_177909-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_177909-T1.utr5p1M747DRAFT_177909-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_177909-T1.utr5p2M747DRAFT_177909-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_177909-T1.exon1M747DRAFT_177909-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_177909-T1.exon2M747DRAFT_177909-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_177909-T1.cdsM747DRAFT_177909-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_177909-T1.utr3p1M747DRAFT_177909-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR007526
DBxrefPFAM:PF04433
ProductSWIRM domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851986.1supercontigKZ851986.1:22710..24672 +
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