You are here

Home

M747DRAFT_180086-T1, M747DRAFT_180086-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_180086-T1
Unique NameM747DRAFT_180086-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:447909..450433+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_180086-T1 ID=M747DRAFT_180086-T1|Name=M747DRAFT_180086-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2525bp|location=Sequence derived from alignment at KZ851907.1:447909..450433+ (Aspergillus niger ATCC 13496)
CTAGATGCTGATCCATGGACTAGTTATTCTTAATTCTTTGCCCTTAACCA
CCTCTCCCTCACCGCCCTTAACCTCTCTTTTCACTTCGATTGCCTCCCCA
GAGGAATGAATACAATAGAGAGATCGGAACAGTGACACTACCCGGGGTAT
ACTGCGGCCATACCGTTTCGGCCTCGCTTCGCCGCAAGGCCTTCCTTGCC
ACCCAACACGTCTGGCTATTTGCGTCGATCAACTGGGAAATCTCAAGGCT
ATTCATTCACTCCTTACACTGCGGCGGCTTGCGTCCACCATGACAGAGTT
GGACTCGCTTCCAGAAGATGAGCGCTCGGTGGAGTTATCATCCATTGCTG
CCATCTACCCCGAGATCAAGATAGATCCGTCCTCGCCATTCAAAGCATCC
CTCACCCTACCGGTTAAGCCATCTGCTCCCCTGCGTGTCTGCTTCCAGCA
ACAATCCGAGACAGAGTTCCCCGCCGTACTAACTCCTCCCACGTCGGTTG
ATGCCAACGATCCTGGCTTTCCTTTCAAGACAGGTGACCATAACTCCGCT
AGCCTCAATCGCGATAGTCATACACTCTCACATCTTCCTCCCATCTGCCT
CGAAATCGAGCTGCCCCAAGGTTACCCTTCCGAAGAACCGCCCATTTTCA
GGCTTGAAACAAACCCTCCGTGGTTGCCACCTTCTATATTGTCAGGTCTT
TTGGATGACGGAAAACGTCTTTGGGAGGAATGTGGCAAGGACCTCGTGGT
ATACACATATATTGACCATCTTCAGCAACTTGGGGAGTCAGCTTTTGGGG
TTGGCGACATATCCGGTGGCGAAGTTCAACTTCCCCGTGAGTTAAAGATC
GCATTGCTAGACTTCAACAACAAAGCCGAACGGGAAAGGTTCGAGGAGGA
GACCTTTGAGTGTGGAGTCTGTCTCGAACCCAAGAAGGGCACGATTTGCC
ACCGACTCGTACTTTGTGGGCATATCTTCTGCGTGCCTTGTCTCCAAGAC
TTCTACAACTCTTGTATAACGGAAGGCGACGTCGAAGGTGTCAAGTGTTT
GGCTCCTGGTTGTGGTAAAGAATCAAACAGTACCTCTCCCACCGACGCCC
GTCCGAAGAAACACAAAAAGCAAGATCGAACCCTGAGCCCCAGCGAGCTT
CTTCAGATCCCGTTAGAACAAGAGACAGTGCAGCGTTACGTTTTCCTGAA
ACGGAAGAAGAAGCTCGAGGCGGACAAGTCGACTGTGTATTGCCCACGGC
AGTGGTGTCAAGGAGCCGCACGATCCAAGAGACACCCCAAGCCTGTTGAT
CCAATGACAGATGACCTCGATGACGAAGATGACGAAGATGAAGAGGGACC
CGTGTTCGATCCCTTAGGGGAGGAGGCTCAGCTACCACCAATGTCCGAGC
GCGTCGCCATCTGCGAAGATTGCAACTATGCCTTCTGTTGTGTTTGCAAG
AAGGGCTGGCATGGCGAACTCGTACGGTGCTTCCCTCGCCGCGAAGCAGA
GCTCTCGGCCGAGGAGAAAGCAACGGAGGAGTATCTGCGTATGTACACCT
CGGCATGTCCGACATGCGATGCTCCATGCCAGAAGCAAATGGGTTGCAAT
CATATGATATGTTTCAAATGCGACACCCACTTCTGCTATCTCTGCTCTAG
TTGGCTCTGCGAAGACAACCCTTACCGCCATTTCAACGACATCAACAGTG
GATGTTTCAATCGACTGTGGGATCTGGAAGGTGGCGATGGGATCAATCCC
GATGGAGCCGCAGCCTTGCATCGTGTACCCGACGAACTGCTGGACTTCGA
CGATGGCAGCGATGACGAGGACCTCGTTGCTTGGGAACTCGGCAGACGAC
CTCCACCTCCTGCTCCGGTCCCTCCAAGAGTCAACAACGGCGCAGCTGGA
GGTAATCGCCATCGTGGGAACAACGCCAATGATCTCGACGCCGCAGGTCG
AGCAGCCGCAGCTGAAAGACAAGCTCAAGCACGAGCAATGGCCGAGGTCC
GCCGTCGTCCAGATGGCGAGCCTCCCCAAGTCAGACGCCCGGGACTCCAG
AGGTTTCTGGACCTGGTCCTGAATGACCGGGAAGACGAATGGGACAGTGA
CGAGCTAGATGATGATTTCTAGCAATGGCCCCATCACTTCCACGGATCTA
AATATATTGGAACCTCCTACCATACCTCACCCCCCTTTTTGGTATCTATA
CTTGTTTCTTCATGGATATACCGTATCACGACACGACTCATGTACGTTTT
GCGAAGCTTGCCATTCATCTCTAACTATGACCTTGACGACTATGACTATG
CATGCATCTTGCATTAGCGAAAATGTTCATTGGTTTTGGACATATTCCTT
TTATTTTCTCTTTGCATCACACTGCATCCAACATCCAAAATTCAATTTAA
GCCGTGTTGATCTTCTTTGGCATGTATATCATGATATGTTTTTCTGTTTC
AAAAAGAAAGCAACGTCTATTTAATACTCGCTTTTCCATTTTCTTCCCGA
TCGAAATCTTGCATTTCGATTACAA
back to top

Coding sequence (CDS) from alignment at KZ851907.1:447909..450433+

>M747DRAFT_180086-T1 ID=M747DRAFT_180086-T1|Name=M747DRAFT_180086-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1833bp|location=Sequence derived from alignment at KZ851907.1:447909..450433+ (Aspergillus niger ATCC 13496)
ATGACAGAGTTGGACTCGCTTCCAGAAGATGAGCGCTCGGTGGAGTTATC
ATCCATTGCTGCCATCTACCCCGAGATCAAGATAGATCCGTCCTCGCCAT
TCAAAGCATCCCTCACCCTACCGGTTAAGCCATCTGCTCCCCTGCGTGTC
TGCTTCCAGCAACAATCCGAGACAGAGTTCCCCGCCGTACTAACTCCTCC
CACGTCGGTTGATGCCAACGATCCTGGCTTTCCTTTCAAGACAGGTGACC
ATAACTCCGCTAGCCTCAATCGCGATAGTCATACACTCTCACATCTTCCT
CCCATCTGCCTCGAAATCGAGCTGCCCCAAGGTTACCCTTCCGAAGAACC
GCCCATTTTCAGGCTTGAAACAAACCCTCCGTGGTTGCCACCTTCTATAT
TGTCAGGTCTTTTGGATGACGGAAAACGTCTTTGGGAGGAATGTGGCAAG
GACCTCGTGGTATACACATATATTGACCATCTTCAGCAACTTGGGGAGTC
AGCTTTTGGGGTTGGCGACATATCCGGTGGCGAAGTTCAACTTCCCCGTG
AGTTAAAGATCGCATTGCTAGACTTCAACAACAAAGCCGAACGGGAAAGG
TTCGAGGAGGAGACCTTTGAGTGTGGAGTCTGTCTCGAACCCAAGAAGGG
CACGATTTGCCACCGACTCGTACTTTGTGGGCATATCTTCTGCGTGCCTT
GTCTCCAAGACTTCTACAACTCTTGTATAACGGAAGGCGACGTCGAAGGT
GTCAAGTGTTTGGCTCCTGGTTGTGGTAAAGAATCAAACAGTACCTCTCC
CACCGACGCCCGTCCGAAGAAACACAAAAAGCAAGATCGAACCCTGAGCC
CCAGCGAGCTTCTTCAGATCCCGTTAGAACAAGAGACAGTGCAGCGTTAC
GTTTTCCTGAAACGGAAGAAGAAGCTCGAGGCGGACAAGTCGACTGTGTA
TTGCCCACGGCAGTGGTGTCAAGGAGCCGCACGATCCAAGAGACACCCCA
AGCCTGTTGATCCAATGACAGATGACCTCGATGACGAAGATGACGAAGAT
GAAGAGGGACCCGTGTTCGATCCCTTAGGGGAGGAGGCTCAGCTACCACC
AATGTCCGAGCGCGTCGCCATCTGCGAAGATTGCAACTATGCCTTCTGTT
GTGTTTGCAAGAAGGGCTGGCATGGCGAACTCGTACGGTGCTTCCCTCGC
CGCGAAGCAGAGCTCTCGGCCGAGGAGAAAGCAACGGAGGAGTATCTGCG
TATGTACACCTCGGCATGTCCGACATGCGATGCTCCATGCCAGAAGCAAA
TGGGTTGCAATCATATGATATGTTTCAAATGCGACACCCACTTCTGCTAT
CTCTGCTCTAGTTGGCTCTGCGAAGACAACCCTTACCGCCATTTCAACGA
CATCAACAGTGGATGTTTCAATCGACTGTGGGATCTGGAAGGTGGCGATG
GGATCAATCCCGATGGAGCCGCAGCCTTGCATCGTGTACCCGACGAACTG
CTGGACTTCGACGATGGCAGCGATGACGAGGACCTCGTTGCTTGGGAACT
CGGCAGACGACCTCCACCTCCTGCTCCGGTCCCTCCAAGAGTCAACAACG
GCGCAGCTGGAGGTAATCGCCATCGTGGGAACAACGCCAATGATCTCGAC
GCCGCAGGTCGAGCAGCCGCAGCTGAAAGACAAGCTCAAGCACGAGCAAT
GGCCGAGGTCCGCCGTCGTCCAGATGGCGAGCCTCCCCAAGTCAGACGCC
CGGGACTCCAGAGGTTTCTGGACCTGGTCCTGAATGACCGGGAAGACGAA
TGGGACAGTGACGAGCTAGATGATGATTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_180086M747DRAFT_180086Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180086-T1.utr5p1M747DRAFT_180086-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180086-T1.exon1M747DRAFT_180086-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180086-T1.cdsM747DRAFT_180086-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180086-T1.utr3p1M747DRAFT_180086-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180086-T1M747DRAFT_180086-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR006575
DBxrefInterPro:IPR002867
DBxrefPFAM:PF05773
DBxrefPFAM:PF01485
ProductRING finger protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:447909..450433 +
Powered by Drupal