You are here

Home

M747DRAFT_181219-T1, M747DRAFT_181219-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_181219-T1
Unique NameM747DRAFT_181219-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:664305..665380+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_181219-T1 ID=M747DRAFT_181219-T1|Name=M747DRAFT_181219-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1076bp|location=Sequence derived from alignment at KZ851907.1:664305..665380+ (Aspergillus niger ATCC 13496)
TTAAACGCCAAAAGACGACTGTCTGCATCCTCTCTATTTCGCTTACCGCT
TCGTCGCATCGTACCCGCCACCCGAGCAACCTCCCCCCTAAGTTAATCCC
AACGTTCGCAACTCTACTACCCATCAATTATGGCCGCCATCTGGGGTAAC
GGCGGGCAGGCTGGCCAGTTCCCGCTGGAGCAATGGTTCTATGAAATGCC
CCCTGTAACTCGATGGTGGACAGCAGCCACAGTTGCCACTTCAGTCTTGG
TCCAATGTCACGTCCTCACCCCATTCCAGCTGTTTTATAGCTTCCGCGCA
GTCTATGTTAAGTCTCAGGTACGTCGCAGCTAGTACTTCCGTCCACTGTA
TAGGGTAGACGAATCACGCGGCTAACCATCGCATAGTATTGGCGTCTGTT
CACAACCTTCCTATACTTCGGACCACTCAATCTCGACTTACTATTTCATG
TGTTCTTCTTGCAGCGATACTCGCGCCTCTTGGAGGAATCATCGGGGCGA
TCGCCGGCCCACTTCTCGTGGCTTCTGTTCTACGCCATGGCCTCTCTCCT
CGTCCTCTCGCCATTTCTCTCCCTTCCATTCCTGGGCACGGCTCTCTCTT
CCAGTCTGGTCTACATCTGGAGTCGTCGCAACCCGGAAACTCGCCTCAGC
TTCCTAGGAATGCTGGTCTTCACCGCCCCCTATCTCCCCTGGGTTCTGAT
GGCATTCAGCCTGGTCGTCCATGGCATCGTGCCCAAGGATGAAATCTGCG
GCGTTGTCGTCGGCCACGTCTGGTACTTCTTCAACGATGTTTACCCTTCG
CTTCACGGTGGTCACCGTCCTTTCGATCCTCCTATGTGGTGGGTGCGTCT
GTTTGAGTCAGGGCCCGGGGAACGAGGCACCGACGCTGCCAACGTCAACG
GGGAATTCGCCGCTGCTGCTGCACCCGAAGTTCGGTGAGCTATTTGTGCA
CCCCACTGGGGCATTTACTGCATGGCGATGCAAAGAATCGTCCGCGTAAT
CGCTCTGGAAACGTCAGCATATATGTGTGTACTGCCAACTACTCGCGCCG
ACACGCGCGAAGCATGAGAAGTTAAT
back to top

Coding sequence (CDS) from alignment at KZ851907.1:664305..665380+

>M747DRAFT_181219-T1 ID=M747DRAFT_181219-T1|Name=M747DRAFT_181219-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1482bp|location=Sequence derived from alignment at KZ851907.1:664305..665380+ (Aspergillus niger ATCC 13496)
ATGGCCGCCATCTGGGGTAACGGCGGGCAGGCTGGCCAGTTCCCGCTGGA
GCAATGGTTCTATGAAATGCCCCCTGTAACTCGATGGTGGACAGCAGCCA
CAGTTGCCACTTCAGTCTTGGTCCAATGTCACGTCCTCACCCCATTCCAG
CTGTTTTATAGCTTCCGCGCAGTCTATGTTAAGTCTCAGTATTGGCGTCT
GTTCACAACCTTCCTATACTTCGGACCACTCAATCTCGACTTACTATTTC
ATGTGTTCTTCTTGCAGCGATACTCGCGCCTCTTGGAGGAATCATCGGGG
CGATCGCCGGCCCACTTCTCGTGGCTTCTGTTCTACGCCATGGCCTCTCT
CCTCGTCCTCTCGCCATTTCTCTCCCTTCCATTCCTGGGCACGGCTCTCT
CTTCCAGTCTGGTCTACATCTGGAGTCGTCGCAACCCGGAAACTCGCCTC
AGCTTCCTAGGAATGCTGGTCTTCACCGCCCCCTATCTCCCCTGGGTTCT
GATGGCATTCAGCCTGGTCGTCCATGGCATCGTGCCCAAGGATGAAATCT
GCGGCGTTGTCGTCGGCCACGTCTGGTACTTCTTCAACGATGTTTACCCT
TCGCTTCACGGTGGTCACCGTCCTTTCGATCCTCCTATGTGGTGGGTGCG
TCTGTTTGAGTCAGGGCCCGGGGAACGAGGCACCGACGCTGCCAACGTCA
ACGGGGAATTCGCCGCTGCTGCTGCACCCGAAGTTCGGTGAATGGCCGCC
ATCTGGGGTAACGGCGGGCAGGCTGGCCAGTTCCCGCTGGAGCAATGGTT
CTATGAAATGCCCCCTGTAACTCGATGGTGGACAGCAGCCACAGTTGCCA
CTTCAGTCTTGGTCCAATGTCACGTCCTCACCCCATTCCAGCTGTTTTAT
AGCTTCCGCGCAGTCTATGTTAAGTCTCAGTATTGGCGTCTGTTCACAAC
CTTCCTATACTTCGGACCACTCAATCTCGACTTACTATTTCATGTGTTCT
TCTTGCAGCGATACTCGCGCCTCTTGGAGGAATCATCGGGGCGATCGCCG
GCCCACTTCTCGTGGCTTCTGTTCTACGCCATGGCCTCTCTCCTCGTCCT
CTCGCCATTTCTCTCCCTTCCATTCCTGGGCACGGCTCTCTCTTCCAGTC
TGGTCTACATCTGGAGTCGTCGCAACCCGGAAACTCGCCTCAGCTTCCTA
GGAATGCTGGTCTTCACCGCCCCCTATCTCCCCTGGGTTCTGATGGCATT
CAGCCTGGTCGTCCATGGCATCGTGCCCAAGGATGAAATCTGCGGCGTTG
TCGTCGGCCACGTCTGGTACTTCTTCAACGATGTTTACCCTTCGCTTCAC
GGTGGTCACCGTCCTTTCGATCCTCCTATGTGGTGGGTGCGTCTGTTTGA
GTCAGGGCCCGGGGAACGAGGCACCGACGCTGCCAACGTCAACGGGGAAT
TCGCCGCTGCTGCTGCACCCGAAGTTCGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_181219M747DRAFT_181219Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_181219-T1.utr5p1M747DRAFT_181219-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_181219-T1.exon1M747DRAFT_181219-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_181219-T1.exon2M747DRAFT_181219-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_181219-T1.cdsM747DRAFT_181219-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_181219-T1.utr3p1M747DRAFT_181219-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_181219-T1M747DRAFT_181219-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007599
DBxrefPFAM:PF04511
ProductDER1-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:664305..665380 +
Powered by Drupal