You are here

Home

M747DRAFT_182473-T1, M747DRAFT_182473-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_182473-T1
Unique NameM747DRAFT_182473-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:826733..828396+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_182473-T1 ID=M747DRAFT_182473-T1|Name=M747DRAFT_182473-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1664bp|location=Sequence derived from alignment at KZ851907.1:826733..828396+ (Aspergillus niger ATCC 13496)
TTGGATCAGTAAAAGCTCCGCCGATAACCTGGAGTCCGAGTCTCCATCGA
TCATCCTTCCAGCCCTTGTTCTCCCAGTACCTTTTTCTAACCTCCAACAA
CACTATTCTGACTACACAATTCCTTCTTGTCAATTCGACGTCTCTATTTT
GTTTATTCAAGCGCCTCCCTCGTCTTTCTGTTCCTGTTCATTCGCTTGCA
TCCGGCCGAGGGGGCTTTTCAAGAGTAATACGTAGGCGCTATGTCTGGCG
CAAGGCATTGGTAAGTGCTTCTCTTTACTCCATGTGATATGAATCCCAGT
CATATCGGTCCTGACAATTGCTGGAATAGGGAGCAAGACAAAGAGGCCAC
CGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGG
AGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGAC
CGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGA
GGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATG
GAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTG
GAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGA
GCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCC
CCAAGGTAGGACTTTATCCTTTCTATAGGCCTGTCATGCGGCACCGTGTC
TCGGAGGGGAACTTACTAACCATGGCTGCTACTAGATTGCGCGGGATGAC
AACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCCGACTTTGAGTC
TTCGGACGCGGCCATAACCAACATGAACGGCCAATATCTTATGAACAAGC
AGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAGGTGAACGCCAC
GGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGTAAACATAACGT
GCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAACCCAGGGACAC
CTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTCGGCCAATGAGT
ACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCTCCTCCGAATGT
ACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACCCGTTCCACCTA
CATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGCCGCCACCTTCT
CAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCAGGATTCAATGG
TGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCCGCCAGGCTTTG
CTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTCCCCCACCTCCG
TTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGGCGTTGAGCATT
CTAGGCCAACTTCCTTGGCTTGAACCGAAGACGAGGGGTTATTTGAAAAG
AACAATTTCATCATCCTCAACCGTTACTTGGATTGTCGGATAATGACTAC
TCGACTTGATGTAACGACCCACAACCGAGTAGCTGTCAATGCCCTACGGA
AGAACGAGGGCCGCGCCCGATATTGAACGGCTTTAGAGGCATCAACTCAC
AAGAGAACACTGAC
back to top

Coding sequence (CDS) from alignment at KZ851907.1:826733..828396+

>M747DRAFT_182473-T1 ID=M747DRAFT_182473-T1|Name=M747DRAFT_182473-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3168bp|location=Sequence derived from alignment at KZ851907.1:826733..828396+ (Aspergillus niger ATCC 13496)
ATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGCCACCGTCTACAT
CGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGC
TGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACA
CAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGC
CGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCA
TCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGG
GCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCT
TTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATTG
CGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCC
GACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCT
TATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAG
GTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGT
AAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAA
CCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTC
GGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCT
CCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACC
CGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGC
CGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCA
GGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCC
GCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTC
CCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGG
CGTTGAATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGCCACCGT
CTACATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGC
TGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGA
GTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGA
AGATGCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAA
AGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAG
ATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCA
AGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCA
AGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCG
TTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCA
ATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATG
GGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAA
GCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATT
CTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATA
GCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGT
ATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAG
CCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAG
CACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTC
CCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGC
ACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACAC
CTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCG
CGCGGGCGTTGAATGTCTGGCGCAAGGCATTGGGAGCAAGACAAAGAGGC
CACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTAT
GGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAA
GACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAG
CGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGT
ATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCG
GTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTAC
GGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATA
TCCCCAAGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTT
GTGTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAA
CGGCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGA
AAGATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCT
GCACAAGCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCC
ACAATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACG
GTGATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGC
AGAGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACA
AGCAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTT
TACCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCC
TTCCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCA
AGCAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAG
GAACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGC
TATGCGCGCGGGCGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_182473M747DRAFT_182473Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182473-T1M747DRAFT_182473-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182473-T1.utr5p1M747DRAFT_182473-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182473-T1.exon1M747DRAFT_182473-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_182473-T1.exon2M747DRAFT_182473-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_182473-T1.exon3M747DRAFT_182473-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182473-T1.cdsM747DRAFT_182473-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182473-T1.utr3p1M747DRAFT_182473-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034158
DBxrefInterPro:IPR034159
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
ProductRNA-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:826733..828396 +
Powered by Drupal