You are here

M747DRAFT_183361-T1, M747DRAFT_183361-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_183361-T1
Unique NameM747DRAFT_183361-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851991.1:6101..7418+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_183361-T1 ID=M747DRAFT_183361-T1|Name=M747DRAFT_183361-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1318bp|location=Sequence derived from alignment at KZ851991.1:6101..7418+ (Aspergillus niger ATCC 13496)
CTCCTGGAGTTTTCTGTCGAGTCCTTGCCAAATCCCGTCTATCCGGAAGC CGGTTTTTAGGTCTAGCGGAGTGTTACACGAAAGTGAACAGGCAAACATT CTCGAAGATCCTTGGTGAGTACTTTAGTCTCCTTTGATTTTTCTTTCTTG CTCCTTTTCCTCCCTACCTTTCTGCCTTGTCGATGGGGCTGCAGATGCTT GCGTTCTTTCGTCTGGTTTCTCATTCCGCCTCAGTGAGGGGAAGGGCAGC ATCGTGCGGAGTTACACTCGGCAGAGGAAACAAGACTAACGATATTCCCA GCAGATTAGCATCATCTCAGTGTCACAATGGCGAGCTGCAAAGCAAGTTT TGTGTCGATCTTGAACAACGACGACAACCCGGCCTTCACAGTCCGCTCAG CCCCCGGGCTATCTAAAAATCAAGCCACTTCGCCATATCCTTACCACTAC GCACCCCAACAGTCGATCCCGGCTCCAGAGTTCCGCTACCATCATGCATA TGTGAATTCTCCCTCAGTATCACCTGGCCTGGCACGGCTCCCATTCGACC CCGTGCCCGAACCCGTGCAGCCCACCTCTCCCGGCTCCTCGGACTGCTCC TACGACTACATGAGCAGCACCAGTGTTCGATCCCACTATCACCTTGGCCG CCAGGATACGAATGCCTATCGCCCGCTCTCTGAAAAGCGCATCAGCGGCA GCTCTGTTACTGAGCCTCCATCGCCCCAGCCTTCTGTCGGCAGTAACAAG GAATCTATGGCTGCCAAATCCGGAGTCCGGAAGAACAAGTACCCTTGTCC TTTTGCTGCCAGCCACGGCTGCTCTGCGACGTTTACGACATCCGGCCACG CCGCCCGCCACGGAAAGAAGCACACAGGGGAGAAGAGCGTCCACTGCCCC ATCTGCAACAAGGCATTCACCCGGAAAGACAACATGAAGCAGCACATTCG CACGCACCGCACCCATTCCGAGGATATGCCTACGGCCATGACGACGGATC GGGATAGCGATGGCAGCAGTAGCTGGTCGACCCGGAGGAGCAACACATCG GCGTATGACCACCAGCGCTCCGTCAGCGGGACACAGATGGACGGGCCCTC GTATGATAGTGGTTCAACCCTGAACCCGATCTCCACAAGTCGGGCGTATG AGCCGATGTCCTCACGAGTATGACAAGTGAGCCAAGACGTGAACGGAACA TGAACACAAAAGATTACCACGGGTTGATGTTTACTTATTTCCATTCTCTG GACATCTCTATTTCTACTCTTCATCTTTTCCCAATGGCGGGACAAAGCGT GTCCCATCGGAGCAACGG
back to top

Coding sequence (CDS) from alignment at KZ851991.1:6101..7418+

>M747DRAFT_183361-T1 ID=M747DRAFT_183361-T1|Name=M747DRAFT_183361-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=846bp|location=Sequence derived from alignment at KZ851991.1:6101..7418+ (Aspergillus niger ATCC 13496)
ATGGCGAGCTGCAAAGCAAGTTTTGTGTCGATCTTGAACAACGACGACAA
CCCGGCCTTCACAGTCCGCTCAGCCCCCGGGCTATCTAAAAATCAAGCCA
CTTCGCCATATCCTTACCACTACGCACCCCAACAGTCGATCCCGGCTCCA
GAGTTCCGCTACCATCATGCATATGTGAATTCTCCCTCAGTATCACCTGG
CCTGGCACGGCTCCCATTCGACCCCGTGCCCGAACCCGTGCAGCCCACCT
CTCCCGGCTCCTCGGACTGCTCCTACGACTACATGAGCAGCACCAGTGTT
CGATCCCACTATCACCTTGGCCGCCAGGATACGAATGCCTATCGCCCGCT
CTCTGAAAAGCGCATCAGCGGCAGCTCTGTTACTGAGCCTCCATCGCCCC
AGCCTTCTGTCGGCAGTAACAAGGAATCTATGGCTGCCAAATCCGGAGTC
CGGAAGAACAAGTACCCTTGTCCTTTTGCTGCCAGCCACGGCTGCTCTGC
GACGTTTACGACATCCGGCCACGCCGCCCGCCACGGAAAGAAGCACACAG
GGGAGAAGAGCGTCCACTGCCCCATCTGCAACAAGGCATTCACCCGGAAA
GACAACATGAAGCAGCACATTCGCACGCACCGCACCCATTCCGAGGATAT
GCCTACGGCCATGACGACGGATCGGGATAGCGATGGCAGCAGTAGCTGGT
CGACCCGGAGGAGCAACACATCGGCGTATGACCACCAGCGCTCCGTCAGC
GGGACACAGATGGACGGGCCCTCGTATGATAGTGGTTCAACCCTGAACCC
GATCTCCACAAGTCGGGCGTATGAGCCGATGTCCTCACGAGTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_183361M747DRAFT_183361Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_183361-T1M747DRAFT_183361-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_183361-T1.utr5p1M747DRAFT_183361-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_183361-T1.utr5p2M747DRAFT_183361-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_183361-T1.exon1M747DRAFT_183361-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_183361-T1.exon2M747DRAFT_183361-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_183361-T1.cdsM747DRAFT_183361-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_183361-T1.utr3p1M747DRAFT_183361-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851991.1supercontigKZ851991.1:6101..7418 +