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M747DRAFT_227546-T1, M747DRAFT_227546-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_227546-T1
Unique NameM747DRAFT_227546-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:676039..677058-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_227546-T1 ID=M747DRAFT_227546-T1|Name=M747DRAFT_227546-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1020bp|location=Sequence derived from alignment at KZ851899.1:676039..677058- (Aspergillus niger ATCC 13496)
ATGGCTGCCCTTCGCACGACCTCGCGCCTGTTCGCTTCCTCGAAGCCGCT
GTTCCGCCCAGGCGCCTTTTCTCGCTCCTATGCGACTGTTGACGCCCTTT
CCCAGGTGAGCGCAAGCGGCCACGCGAGCAGCAAGACCATTCCCGAATCT
AAGACTTCGAATGTGCAGGACCCTAGCCCCTCGGAGCAGCCCCGGGTCAA
GACTTTCCATGTCTACCGCTGGAACCCCGATCAGCCCACCGAGAAGCCCA
AGATGCAGACTTACTCCCTGGATCTGAACAAGACCGGTCCCATGATGCTC
GACGCGCTGATCCGCATCAAGAACGAGATGGACCCCACCCTGACTTTCCG
GAGAAGTTGCAGAGAGGGTATCTGTGGAAGTTGCGCGATGAACATTGACG
GTGTCAACACCCTGGCTTGCCTGTGTATGTTGTCCTGGAGTGCTTGGTGC
GATGTCCCGGCTTAGTAGCGCTAACTTTTTGCTGTATAGGCCGTATCCCC
ACCGATACCGCCAAGGAGTCTCGCATCTACCCTCTGCCTCACACCTATGT
CGTCAAGGACCTGGTTCCCGATTTGACCTACTTCTACAAGCAGTACAAGT
CGATCAAGCCTTACCTGCAGCGCGACACCCCGACCGCGGATGTAAGTGTT
GACAGCGTGTGCGAGCGATGTGGGATTTTTACTGATAAATATATAGGGTC
TCGAGAACCGCCAGAGCCCCGAGGAGCGTAAGAAGCTGGACGGTCTGTAC
GAGTGCATTCTGTGCGCTTGCTGCTCTACCTCCTGCCCCTCGTACTGGTG
GAACAGCGAGGAGTACCTTGGACCCGCTATCCTCCTCCAGTCCTACCGTT
GGTTGGCCGATTCCCGTGACGAGAAGACCGCCGAGCGTAAGGCCGCTCTC
GACAACAGCATGAGCGTGTACCGTTGCCACACCATTCTTAACTGCTCGCG
GACTTGCCCCAAGGGCCTGAACCCCGCACGGGCCATTGCGGAGATCAAGA
AGATGATGACTGCTCATTAG
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Coding sequence (CDS) from alignment at KZ851899.1:676039..677058-

>M747DRAFT_227546-T1 ID=M747DRAFT_227546-T1|Name=M747DRAFT_227546-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2700bp|location=Sequence derived from alignment at KZ851899.1:676039..677058- (Aspergillus niger ATCC 13496)
GGTCTCGAGAACCGCCAGAGCCCCGAGGAGCGTAAGAAGCTGGACGGTCT
GTACGAGTGCATTCTGTGCGCTTGCTGCTCTACCTCCTGCCCCTCGTACT
GGTGGAACAGCGAGGAGTACCTTGGACCCGCTATCCTCCTCCAGTCCTAC
CGTTGGTTGGCCGATTCCCGTGACGAGAAGACCGCCGAGCGTAAGGCCGC
TCTCGACAACAGCATGAGCGTGTACCGTTGCCACACCATTCTTAACTGCT
CGCGGACTTGCCCCAAGGGCCTGAACCCCGCACGGGCCATTGCGGAGATC
AAGAAGATGATGACTGCTCATTAGGCCGTATCCCCACCGATACCGCCAAG
GAGTCTCGCATCTACCCTCTGCCTCACACCTATGTCGTCAAGGACCTGGT
TCCCGATTTGACCTACTTCTACAAGCAGTACAAGTCGATCAAGCCTTACC
TGCAGCGCGACACCCCGACCGCGGATATGGCTGCCCTTCGCACGACCTCG
CGCCTGTTCGCTTCCTCGAAGCCGCTGTTCCGCCCAGGCGCCTTTTCTCG
CTCCTATGCGACTGTTGACGCCCTTTCCCAGGTGAGCGCAAGCGGCCACG
CGAGCAGCAAGACCATTCCCGAATCTAAGACTTCGAATGTGCAGGACCCT
AGCCCCTCGGAGCAGCCCCGGGTCAAGACTTTCCATGTCTACCGCTGGAA
CCCCGATCAGCCCACCGAGAAGCCCAAGATGCAGACTTACTCCCTGGATC
TGAACAAGACCGGTCCCATGATGCTCGACGCGCTGATCCGCATCAAGAAC
GAGATGGACCCCACCCTGACTTTCCGGAGAAGTTGCAGAGAGGGTATCTG
TGGAAGTTGCGCGATGAACATTGACGGTGTCAACACCCTGGCTTGCCTGT
GGTCTCGAGAACCGCCAGAGCCCCGAGGAGCGTAAGAAGCTGGACGGTCT
GTACGAGTGCATTCTGTGCGCTTGCTGCTCTACCTCCTGCCCCTCGTACT
GGTGGAACAGCGAGGAGTACCTTGGACCCGCTATCCTCCTCCAGTCCTAC
CGTTGGTTGGCCGATTCCCGTGACGAGAAGACCGCCGAGCGTAAGGCCGC
TCTCGACAACAGCATGAGCGTGTACCGTTGCCACACCATTCTTAACTGCT
CGCGGACTTGCCCCAAGGGCCTGAACCCCGCACGGGCCATTGCGGAGATC
AAGAAGATGATGACTGCTCATTAGGCCGTATCCCCACCGATACCGCCAAG
GAGTCTCGCATCTACCCTCTGCCTCACACCTATGTCGTCAAGGACCTGGT
TCCCGATTTGACCTACTTCTACAAGCAGTACAAGTCGATCAAGCCTTACC
TGCAGCGCGACACCCCGACCGCGGATATGGCTGCCCTTCGCACGACCTCG
CGCCTGTTCGCTTCCTCGAAGCCGCTGTTCCGCCCAGGCGCCTTTTCTCG
CTCCTATGCGACTGTTGACGCCCTTTCCCAGGTGAGCGCAAGCGGCCACG
CGAGCAGCAAGACCATTCCCGAATCTAAGACTTCGAATGTGCAGGACCCT
AGCCCCTCGGAGCAGCCCCGGGTCAAGACTTTCCATGTCTACCGCTGGAA
CCCCGATCAGCCCACCGAGAAGCCCAAGATGCAGACTTACTCCCTGGATC
TGAACAAGACCGGTCCCATGATGCTCGACGCGCTGATCCGCATCAAGAAC
GAGATGGACCCCACCCTGACTTTCCGGAGAAGTTGCAGAGAGGGTATCTG
TGGAAGTTGCGCGATGAACATTGACGGTGTCAACACCCTGGCTTGCCTGT
GGTCTCGAGAACCGCCAGAGCCCCGAGGAGCGTAAGAAGCTGGACGGTCT
GTACGAGTGCATTCTGTGCGCTTGCTGCTCTACCTCCTGCCCCTCGTACT
GGTGGAACAGCGAGGAGTACCTTGGACCCGCTATCCTCCTCCAGTCCTAC
CGTTGGTTGGCCGATTCCCGTGACGAGAAGACCGCCGAGCGTAAGGCCGC
TCTCGACAACAGCATGAGCGTGTACCGTTGCCACACCATTCTTAACTGCT
CGCGGACTTGCCCCAAGGGCCTGAACCCCGCACGGGCCATTGCGGAGATC
AAGAAGATGATGACTGCTCATTAGGCCGTATCCCCACCGATACCGCCAAG
GAGTCTCGCATCTACCCTCTGCCTCACACCTATGTCGTCAAGGACCTGGT
TCCCGATTTGACCTACTTCTACAAGCAGTACAAGTCGATCAAGCCTTACC
TGCAGCGCGACACCCCGACCGCGGATATGGCTGCCCTTCGCACGACCTCG
CGCCTGTTCGCTTCCTCGAAGCCGCTGTTCCGCCCAGGCGCCTTTTCTCG
CTCCTATGCGACTGTTGACGCCCTTTCCCAGGTGAGCGCAAGCGGCCACG
CGAGCAGCAAGACCATTCCCGAATCTAAGACTTCGAATGTGCAGGACCCT
AGCCCCTCGGAGCAGCCCCGGGTCAAGACTTTCCATGTCTACCGCTGGAA
CCCCGATCAGCCCACCGAGAAGCCCAAGATGCAGACTTACTCCCTGGATC
TGAACAAGACCGGTCCCATGATGCTCGACGCGCTGATCCGCATCAAGAAC
GAGATGGACCCCACCCTGACTTTCCGGAGAAGTTGCAGAGAGGGTATCTG
TGGAAGTTGCGCGATGAACATTGACGGTGTCAACACCCTGGCTTGCCTGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
GO:0009055electron transfer activity
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SDH2M747DRAFT_227546Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227546-T1M747DRAFT_227546-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227546-T1.cdsM747DRAFT_227546-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227546-T1.exon3M747DRAFT_227546-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_227546-T1.exon2M747DRAFT_227546-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_227546-T1.exon1M747DRAFT_227546-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteBUSCO:EOG09263X1F
DBxrefInterPro:IPR036010
DBxrefInterPro:IPR017896
DBxrefInterPro:IPR001041
DBxrefInterPro:IPR006058
DBxrefInterPro:IPR017900
DBxrefInterPro:IPR012675
DBxrefInterPro:IPR004489
DBxrefInterPro:IPR009051
DBxrefInterPro:IPR025192
DBxrefPFAM:PF13183
DBxrefPFAM:PF13534
DBxrefPFAM:PF13237
DBxrefPFAM:PF13085
Product subunit B
Productsuccinate dehydrogenase complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:676039..677058 -
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