You are here

Home

M747DRAFT_231247-T1, M747DRAFT_231247-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_231247-T1
Unique NameM747DRAFT_231247-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:566968..568569-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_231247-T1 ID=M747DRAFT_231247-T1|Name=M747DRAFT_231247-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1602bp|location=Sequence derived from alignment at KZ851904.1:566968..568569- (Aspergillus niger ATCC 13496)
ATGATCTCGGCTACCAGGATGTCGGTCACCGCGCGGGCGGCCACCCTACG
GTCTCAGGTGCCGACTTTGAAGACAGCTGCTGTGTCCCAGCGCTCTTTGA
TTCAGTCCTGCTCTTACGCAACATCACGAAACACCCTTCTGAACAGCCAG
CACGCGGACCGTCCCGTTTCGCAACTCGTTTCCCCGTACGCTGCTCTCCC
TCTGACCAGATCCTTCCACGTCGTCGCCCCTCGCTTGCAACAGCAGCAGC
AGAAGGATAAGCAAGAGCAACAAGAAAAGCAGGAGAAACAGTCGGAAGAG
TCCAACCAGGAGAAGAGCGAAGAGGAGCCCAAGAAGGAAGGAAAGAAGGA
TGCGCCTCCGCCGCCACCCCATGGTGACAAGACTCCCTGGCAGGTTTTCA
GAGAGACTCTCCAGACGGAGTTCAAGGCTTCGAAGGAGTGGAATGAGTCG
ACAAAGGCTCTTGCTTCGTCTGCTCACCAGTTCACCGAGAACGAGAACAT
CAAGAAGGCTCGTGCTGCTTATGAAGCCGCCTCTGGAGCCGCCACCTCCA
AGACCGCGACTGCCATCAAGACCACCGGCAAGGCCATTGGCACTAGTGCC
GCATGGACCTGGAACACCCCTGTTGTGAAGGGTATCAGAAAGGGTGTCAA
CGTCACTGGGTCTGGTATTGAGAAGGTCACGAGACCCGTCAGAGAAACCG
AGGCATACAAGAGTGCCGTGGGTGGTGTCAAGAATGCCATCGATGATGGT
AGCAGCTCTCGCTACGGTGGCTACATCGAGAAGGAGGAGCGTCGGAAGCA
GCGCAAGTTGCGTGAAGAAGCTGAGCTCAAGGCTGGTCGCCGTGTCGAGC
CGATGGTTGAGGATCCCAAGTGAGTCATGTCCAGTAGACCATGTCAAGGA
GATCTCTAACAGTCATTTTACTTTAGTGCCGGAACCCACGTTACTCTCCA
CAAGGACTCTGCCTGGAAGGAATCGTGGCGCGACTTCAAGGACTCCAATC
CTATGATGCAAAAGCTCTTCACCCTGAAGGAGACCTACGAGGAGTCGGAG
AACCCCTTGATCAGCACCGCGCGCAGCATTTCCGATCGTGTTGCTGGATT
CTTCGCCGAGAACGAGACCGCTCGTGTTATCAAGAAGTTCCGTGAGATGG
ACCCCAACTTCCAGATGGAAGCCTTCCTCAGAGAAATGCGTGAATACATC
CTGCCCGAGGTTCTTGACGCCTACGTCAAGGGAGACGTTGAGACCCTGAA
GCTCTGGCTCTCCGATGCGCAGTTCCATGTCTATGCTGCTCTTGCCCAGC
AGTACACTACTGCCGGCCTCAAGTCGGATGGCCGCATCCTCGACGTCCGT
GGCGTTGATGTTTCCCACGCCCGCATGCTGGAGCCCGGCGACATCCCCGT
GTTCGTTGTGACTTGCCGCTCCCAGGAGGTTCACGTCTACAAGAACGTGA
AGACCGGCGAGTTGGCTGCCGGCATGGAGGACAAGGTCCAGCTGGTCACC
TACGCCATCGGTCTGACGCGGATACCCGAGGATGTCAACAACCCGGAGAC
CCGGGGTTGGAGATTGATCGAGCTACAGAAGGCCGCTCGTGACTACATCT
AA
back to top

Coding sequence (CDS) from alignment at KZ851904.1:566968..568569-

>M747DRAFT_231247-T1 ID=M747DRAFT_231247-T1|Name=M747DRAFT_231247-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3090bp|location=Sequence derived from alignment at KZ851904.1:566968..568569- (Aspergillus niger ATCC 13496)
TGCCGGAACCCACGTTACTCTCCACAAGGACTCTGCCTGGAAGGAATCGT
GGCGCGACTTCAAGGACTCCAATCCTATGATGCAAAAGCTCTTCACCCTG
AAGGAGACCTACGAGGAGTCGGAGAACCCCTTGATCAGCACCGCGCGCAG
CATTTCCGATCGTGTTGCTGGATTCTTCGCCGAGAACGAGACCGCTCGTG
TTATCAAGAAGTTCCGTGAGATGGACCCCAACTTCCAGATGGAAGCCTTC
CTCAGAGAAATGCGTGAATACATCCTGCCCGAGGTTCTTGACGCCTACGT
CAAGGGAGACGTTGAGACCCTGAAGCTCTGGCTCTCCGATGCGCAGTTCC
ATGTCTATGCTGCTCTTGCCCAGCAGTACACTACTGCCGGCCTCAAGTCG
GATGGCCGCATCCTCGACGTCCGTGGCGTTGATGTTTCCCACGCCCGCAT
GCTGGAGCCCGGCGACATCCCCGTGTTCGTTGTGACTTGCCGCTCCCAGG
AGGTTCACGTCTACAAGAACGTGAAGACCGGCGAGTTGGCTGCCGGCATG
GAGGACAAGGTCCAGCTGGTCACCTACGCCATCGGTCTGACGCGGATACC
CGAGGATGTCAACAACCCGGAGACCCGGGGTTGGAGATTGATCGAGCTAC
AGAAGGCCGCTCGTGACTACATCTAAATGATCTCGGCTACCAGGATGTCG
GTCACCGCGCGGGCGGCCACCCTACGGTCTCAGGTGCCGACTTTGAAGAC
AGCTGCTGTGTCCCAGCGCTCTTTGATTCAGTCCTGCTCTTACGCAACAT
CACGAAACACCCTTCTGAACAGCCAGCACGCGGACCGTCCCGTTTCGCAA
CTCGTTTCCCCGTACGCTGCTCTCCCTCTGACCAGATCCTTCCACGTCGT
CGCCCCTCGCTTGCAACAGCAGCAGCAGAAGGATAAGCAAGAGCAACAAG
AAAAGCAGGAGAAACAGTCGGAAGAGTCCAACCAGGAGAAGAGCGAAGAG
GAGCCCAAGAAGGAAGGAAAGAAGGATGCGCCTCCGCCGCCACCCCATGG
TGACAAGACTCCCTGGCAGGTTTTCAGAGAGACTCTCCAGACGGAGTTCA
AGGCTTCGAAGGAGTGGAATGAGTCGACAAAGGCTCTTGCTTCGTCTGCT
CACCAGTTCACCGAGAACGAGAACATCAAGAAGGCTCGTGCTGCTTATGA
AGCCGCCTCTGGAGCCGCCACCTCCAAGACCGCGACTGCCATCAAGACCA
CCGGCAAGGCCATTGGCACTAGTGCCGCATGGACCTGGAACACCCCTGTT
GTGAAGGGTATCAGAAAGGGTGTCAACGTCACTGGGTCTGGTATTGAGAA
GGTCACGAGACCCGTCAGAGAAACCGAGGCATACAAGAGTGCCGTGGGTG
GTGTCAAGAATGCCATCGATGATGGTAGCAGCTCTCGCTACGGTGGCTAC
ATCGAGAAGGAGGAGCGTCGGAAGCAGCGCAAGTTGCGTGAAGAAGCTGA
GCTCAAGGCTGGTCGCCGTGTCGAGCCGATGGTTGAGGATCCCAATGCCG
GAACCCACGTTACTCTCCACAAGGACTCTGCCTGGAAGGAATCGTGGCGC
GACTTCAAGGACTCCAATCCTATGATGCAAAAGCTCTTCACCCTGAAGGA
GACCTACGAGGAGTCGGAGAACCCCTTGATCAGCACCGCGCGCAGCATTT
CCGATCGTGTTGCTGGATTCTTCGCCGAGAACGAGACCGCTCGTGTTATC
AAGAAGTTCCGTGAGATGGACCCCAACTTCCAGATGGAAGCCTTCCTCAG
AGAAATGCGTGAATACATCCTGCCCGAGGTTCTTGACGCCTACGTCAAGG
GAGACGTTGAGACCCTGAAGCTCTGGCTCTCCGATGCGCAGTTCCATGTC
TATGCTGCTCTTGCCCAGCAGTACACTACTGCCGGCCTCAAGTCGGATGG
CCGCATCCTCGACGTCCGTGGCGTTGATGTTTCCCACGCCCGCATGCTGG
AGCCCGGCGACATCCCCGTGTTCGTTGTGACTTGCCGCTCCCAGGAGGTT
CACGTCTACAAGAACGTGAAGACCGGCGAGTTGGCTGCCGGCATGGAGGA
CAAGGTCCAGCTGGTCACCTACGCCATCGGTCTGACGCGGATACCCGAGG
ATGTCAACAACCCGGAGACCCGGGGTTGGAGATTGATCGAGCTACAGAAG
GCCGCTCGTGACTACATCTAAATGATCTCGGCTACCAGGATGTCGGTCAC
CGCGCGGGCGGCCACCCTACGGTCTCAGGTGCCGACTTTGAAGACAGCTG
CTGTGTCCCAGCGCTCTTTGATTCAGTCCTGCTCTTACGCAACATCACGA
AACACCCTTCTGAACAGCCAGCACGCGGACCGTCCCGTTTCGCAACTCGT
TTCCCCGTACGCTGCTCTCCCTCTGACCAGATCCTTCCACGTCGTCGCCC
CTCGCTTGCAACAGCAGCAGCAGAAGGATAAGCAAGAGCAACAAGAAAAG
CAGGAGAAACAGTCGGAAGAGTCCAACCAGGAGAAGAGCGAAGAGGAGCC
CAAGAAGGAAGGAAAGAAGGATGCGCCTCCGCCGCCACCCCATGGTGACA
AGACTCCCTGGCAGGTTTTCAGAGAGACTCTCCAGACGGAGTTCAAGGCT
TCGAAGGAGTGGAATGAGTCGACAAAGGCTCTTGCTTCGTCTGCTCACCA
GTTCACCGAGAACGAGAACATCAAGAAGGCTCGTGCTGCTTATGAAGCCG
CCTCTGGAGCCGCCACCTCCAAGACCGCGACTGCCATCAAGACCACCGGC
AAGGCCATTGGCACTAGTGCCGCATGGACCTGGAACACCCCTGTTGTGAA
GGGTATCAGAAAGGGTGTCAACGTCACTGGGTCTGGTATTGAGAAGGTCA
CGAGACCCGTCAGAGAAACCGAGGCATACAAGAGTGCCGTGGGTGGTGTC
AAGAATGCCATCGATGATGGTAGCAGCTCTCGCTACGGTGGCTACATCGA
GAAGGAGGAGCGTCGGAAGCAGCGCAAGTTGCGTGAAGAAGCTGAGCTCA
AGGCTGGTCGCCGTGTCGAGCCGATGGTTGAGGATCCCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051087chaperone binding
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_231247M747DRAFT_231247Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231247-T1M747DRAFT_231247-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231247-T1.cdsM747DRAFT_231247-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231247-T1.exon2M747DRAFT_231247-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_231247-T1.exon1M747DRAFT_231247-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteBUSCO:EOG09262ESR
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR017303
DBxrefInterPro:IPR007379
DBxrefPFAM:PF04280
ProductTIM23 translocase complex subunit Tim44
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:566968..568569 -
Powered by Drupal