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M747DRAFT_236884-T1, M747DRAFT_236884-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_236884-T1
Unique NameM747DRAFT_236884-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:102011..103431+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_236884-T1 ID=M747DRAFT_236884-T1|Name=M747DRAFT_236884-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1421bp|location=Sequence derived from alignment at KZ851914.1:102011..103431+ (Aspergillus niger ATCC 13496)
ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCT
CTTGGTATTGAACTCTTCGCCCCCTACCTATTGCTGGCTTGCACCCCATT
CTGATACTAATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTA
CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGA
GCGAGAAAAGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCAT
CCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT
ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCA
GGAGGAAAGAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAG
AGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG
GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGG
ATATATCAAAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATC
TTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGTCTA
CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGC
AGCGCTGAAGAAGAGTCAGGTTTGTCTAACATCCAACAATGATCACGGAG
CTATATGCCAGAGTCCAATTCTAACCCAAAATTACAGTATAATCTGGAAT
TCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAA
GAGAGATTCAACGACGCTATGATCCACGCCAAAAGATATCTAGCGCCTTA
TCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTCCTCGCTT
TTCCTCCGGACACCAAAGCTGAGCCGTACAAGGTAATGGGGATATTGAAC
ACACTCTCAGGAAAACTGTACAAACTAACTCACCCCTAGTCGATGTATGC
TCACGAGCGATGGGCCTATCTTTCCGACCTCTTTGTCCGCACTCACCATG
AGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCG
GGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTC
CAGTTCGAATTCGTTGTCCACAACAACATCTGTTTGTCCAATTTGTTCGA
CCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAG
AGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGG
CCAGCAACGGCTGTTGGAGATGAGCAAGAAAGTCGGTTGTGTTGAGGTTG
GTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATG
AAGAAAGTCTACATCATGTAA
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Coding sequence (CDS) from alignment at KZ851914.1:102011..103431+

>M747DRAFT_236884-T1 ID=M747DRAFT_236884-T1|Name=M747DRAFT_236884-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3888bp|location=Sequence derived from alignment at KZ851914.1:102011..103431+ (Aspergillus niger ATCC 13496)
ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCT
CTTGGTATTGAACTCTTCGCCCCCTACCTATTGCTGGCTTGCACCCCATT
CTGATACTAATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTA
CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGA
GCGAGAAAAGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCAT
CCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT
ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCA
GGAGGAAAGAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAG
AGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG
GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGG
ATATATCAAAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATC
TTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGTCTA
CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGC
AGCGCTGAAGAAGAGTCAGTATAATCTGGAATTCGAACTCCGATTGCAGC
AATACATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCT
ATGATCCACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGT
GGAGATTCATCGAGCTGCAGGACTCCTCGCTTTTCCTCCGGACACCAAAG
CTGAGCCGTACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCC
GACCTCTTTGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCC
TTTGTTACACATCGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTT
CGTGCCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACA
ACATCTGTTTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAA
CATGCCATATGCTCACCACACGAAGAGCTACGTTGAGAACGACCCGATTG
TGCTCCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGC
AAGAAAGTCGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGG
TGAAGTATTCAACGAGGGTGATATGAAGAAAGTCTACATCATGTAAATGG
CTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTG
GTATTGAACTCTTCGCCCCCTACCTATTGCTGGCTTGCACCCCATTCTGA
TACTAATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTACCAC
ATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGA
GAAAAGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCATCCTT
ATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCTATGA
TTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAG
GAAAGAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAGAGAA
ACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGGGCGA
GGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATAT
ATCAAAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATCTTGT
AGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGTCTACGCA
CTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCG
CTGAAGAAGAGTCAGTATAATCTGGAATTCGAACTCCGATTGCAGCAATA
CATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCTATGA
TCCACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAG
ATTCATCGAGCTGCAGGACTCCTCGCTTTTCCTCCGGACACCAAAGCTGA
GCCGTACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCCGACC
TCTTTGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTG
TTACACATCGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTTCGTG
CCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACAACAT
CTGTTTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATG
CCATATGCTCACCACACGAAGAGCTACGTTGAGAACGACCCGATTGTGCT
CCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGCAAGA
AAGTCGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAA
GTATTCAACGAGGGTGATATGAAGAAAGTCTACATCATGTAAATGGCTGC
GGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTGGTAT
TGAACTCTTCGCCCCCTACCTATTGCTGGCTTGCACCCCATTCTGATACT
AATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTACCACATGA
GCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAA
AGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCATCCTTATCA
AATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCTATGATTTC
CCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAGGAAA
GAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAGAGAAACTT
CACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGGGCGAGGGT
CCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATATATCA
AAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATCTTGTAGAT
CTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGTCTACGCACTGG
TGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCGCTGA
AGAAGAGTCAGTATAATCTGGAATTCGAACTCCGATTGCAGCAATACATT
GAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCTATGATCCA
CGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAGATTC
ATCGAGCTGCAGGACTCCTCGCTTTTCCTCCGGACACCAAAGCTGAGCCG
TACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCCGACCTCTT
TGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTGTTAC
ACATCGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTTCGTGCCAT
TCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACAACATCTGT
TTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATGCCAT
ATGCTCACCACACGAAGAGCTACGTTGAGAACGACCCGATTGTGCTCCCA
AATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGCAAGAAAGT
CGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAAGTAT
TCAACGAGGGTGATATGAAGAAAGTCTACATCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FYV10M747DRAFT_236884Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_236884-T1.exon1M747DRAFT_236884-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_236884-T1.exon2M747DRAFT_236884-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_236884-T1.exon3M747DRAFT_236884-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_236884-T1.cdsM747DRAFT_236884-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_236884-T1M747DRAFT_236884-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261O7R
DBxrefInterPro:IPR006594
DBxrefInterPro:IPR024964
DBxrefInterPro:IPR006595
DBxrefInterPro:IPR013144
DBxrefPFAM:PF10607
ProductGID complex subunit containing RING finger motif
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:102011..103431 +
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