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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851916.1:432560..434591+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_238148-T1 ID=M747DRAFT_238148-T1|Name=M747DRAFT_238148-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2032bp|location=Sequence derived from alignment at KZ851916.1:432560..434591+ (Aspergillus niger ATCC 13496)
ATGGCTCCACGAGATTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGTGCCGTGAAGCCAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCTGC
TGCTATCTACCTTCATGGCCACAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGTAAGTTACTCGTTGGTAAACATATGCATATAAGCTTTTTCTAATC
ATTCCCCAGGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTG
TATGGGACGCTCATTACCCTTGGCCATGCCGAAAGATCATTGGCCCTCCC
CCGGGCGATGTATCCGGTATTGGTCCGGTCAATAACCCGGCGCAACAATC
AGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGCTCTG
CGGGGATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCC
ATTCTCTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGA
TTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTC
GCCTTGTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGT
TACATTGTGTCCTGCTCCAAAGACACTACAATCTGTGTGTGGGATCGGCA
CACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACG
CTGTTCAGCTGCGGGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGTGTC
GCCAAGCTCTGGAACATCACTTCTGGCCTTTGTGTGAAGGAGTTTCCCAG
CAAGGACCGTGGGCTGGCATGTGTCGAATTCAGCGATGATGCTCGAACCA
TTCTCACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACT
GGCGACATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTT
GCACCTCGACAGTATGAATCAAAGAATCGTCAGTGGTAGTTATGACATGA
GTGTCAAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCG
GGCTGGACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCAT
TGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACG
GACTAGATGGCATAGACTTGCTGAAAGAGTAA back to topCoding sequence (CDS) from alignment at KZ851916.1:432560..434591+ >M747DRAFT_238148-T1 ID=M747DRAFT_238148-T1|Name=M747DRAFT_238148-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3954bp|location=Sequence derived from alignment at KZ851916.1:432560..434591+ (Aspergillus niger ATCC 13496)
ATGGCTCCACGAGATTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGTGCCGTGAAGCCAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCTGC
TGCTATCTACCTTCATGGCCACAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG
GACGCTCATTACCCTTGGCCATGCCGAAAGATCATTGGCCCTCCCCCGGG
CGATGTATCCGGTATTGGTCCGGTCAATAACCCGGCGCAACAATCAGCCG
GAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGCTCTGCGGGG
ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCT
CTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTA
CCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT
GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGTTACAT
TGTGTCCTGCTCCAAAGACACTACAATCTGTGTGTGGGATCGGCACACAG
GGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT
CAGCTGCGGGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGTGTCGCCAA
GCTCTGGAACATCACTTCTGGCCTTTGTGTGAAGGAGTTTCCCAGCAAGG
ACCGTGGGCTGGCATGTGTCGAATTCAGCGATGATGCTCGAACCATTCTC
ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACTGGCGA
CATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACC
TCGACAGTATGAATCAAAGAATCGTCAGTGGTAGTTATGACATGAGTGTC
AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTG
GACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGG
CTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA
GATGGCATAGACTTGCTGAAAGAGTAAATGGCTCCACGAGATTCTAGCAC
TATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAA
CTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGG
CACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGCCAGGTCGT
GGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGTGCCGTGAAGCCA
AGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGT
CGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCATTCTGTTCA
TCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTA
ATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCC
CATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCTGTTTTCTC
GAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGA
ATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGA
TTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTC
AGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCT
GCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAG
TCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATC
CTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACC
CTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACT
CATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGA
ACATCGGTGGAAGGAAGGAAAGGCTGCTGCTATCTACCTTCATGGCCACA
AGGACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGC
TCTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATG
CCGAAAGATCATTGGCCCTCCCCCGGGCGATGTATCCGGTATTGGTCCGG
TCAATAACCCGGCGCAACAATCAGCCGGAAAGCCGCCCTTCTTGACCATC
TGCCCCCCGCCGACGCGCTCTGCGGGGATCATGGCTCCCATTGAGCACAG
CGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAA
TCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAG
AACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCT
GGATGTCTGCTTTGATGACCGTTACATTGTGTCCTGCTCCAAAGACACTA
CAATCTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTT
GGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGGGGAGATCTTGTCGT
TTCTGCAAGCGGGGACGGTGTCGCCAAGCTCTGGAACATCACTTCTGGCC
TTTGTGTGAAGGAGTTTCCCAGCAAGGACCGTGGGCTGGCATGTGTCGAA
TTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGAT
CTATCAGTTTGACGCCAATACTGGCGACATGGTCAATGAGCTCAAGGGCC
ACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAATCAAAGAATC
GTCAGTGGTAGTTATGACATGAGTGTCAAAGTATTCGATGCTCAAAGTGG
CGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCG
TCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCT
GTCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGA
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | F-box and WD40 domain protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851916.1 | supercontig | KZ851916.1:432560..434591 + |
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