You are here

M747DRAFT_239482-T1, M747DRAFT_239482-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_239482-T1
Unique NameM747DRAFT_239482-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851919.1:231924..233247+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1324bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG TAAGAAGAGACGCGTCAAGGTAAGCACCGTCCAGTTTCATACATTATCAT ATCCCGTATCTCCTGGATTACGCCTGTGTTGATTAGCCGAAAACTGTCCA GTTCTGGAACTATTCAATACCCGTCTAATTCACTGTCATCCTTGCAGCAC TCTTCTAACGGCTATAGTGCGATGAACGAGGCCCACCATGCTCCAATTGC ATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGCAA GGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATTAG TAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCCAT GGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATGCA CAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGACC ACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACTTC CTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACACT TGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCACA ATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAGCC AATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGCAT AACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGACCG AAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCTTT ACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGAGG CTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGCAC TGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATGCT GAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGTTT CTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGTTG CAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTCTC GCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGATGG GAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCTGC TGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGTGG CCACAACGTAAAATAGGACTTTGA
back to top

Coding sequence (CDS) from alignment at KZ851919.1:231924..233247+

>M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGTGCGATGAACGAGGCCCACCATGCTCCAATT
GCATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGC
AAGGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATT
AGTAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCC
ATGGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATG
CACAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGA
CCACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACT
TCCTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACA
CTTGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCA
CAATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAG
CCAATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGC
ATAACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGAC
CGAAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCT
TTACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGA
GGCTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGC
ACTGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATG
CTGAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGT
TTCTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGT
TGCAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTC
TCGCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGAT
GGGAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCT
GCTGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGT
GGCCACAACGTAAAATAGGACTTTGAATGCCGCCCAGAAGGACCCATACC
AAGTCGCGCAATGGCTGTGACCAGTGTAAGAAGAGACGCGTCAAGTGCGA
TGAACGAGGCCCACCATGCTCCAATTGCATTAGCCGGGAGCTGGCATGTA
CTTATTATAAGACCCCCGCGGCACGCAAGGAGACTACACTATCGACAAGT
CCTGCTCCTTTGCAGTCCGCCAGATTAGTAGCACCCTCTGATGCAACACT
TCATGCCAACCAGCCCTTCTCCCGCCATGGATCTTCACCTCCAAACCTTG
CTTGCCTGCGGGAGCTTGAGCTAATGCACAAGTTTTCCACGGAGACCTAT
CAAAGCCTTTGCAATGAACCAACAGACCACCACGAATGGCAGTATGTTAT
CCCTCGCAAAGCTTTGCAGCACGACTTCCTCATGAGCGGGATACTAGCGG
TTGCATCGCTCCATATCGCGTCGACACTTGATCCACCAGAAGCACTCTCC
TATATTGACACAGCTCTGGAGTACCACAATCTTGCATTTGCACCTTTTCG
CCATGCAATTGATAATATTAATCCAGCCAATTGTGACGCAGTCCTAACTC
ACTCGGTCATTATAACTGTTATTGGCATAACATTACCACAATCGGCTGTT
GCACGAGAAGAGAGTCAAAGCATGACCGAAAATATTATTGTCGTTTTCGA
GTTGCTGCACGGTGTCAGTAAGATCTTTACCATCAGTCGTCCTTGGCTTC
AAGGAAAGGTGTTCACTTCCCGGAGAGGCTTCTGGGAAAATCAGCTTTCC
ATACTAGACAGTGAAATCGAGGCTGCACTGGATCGATTAACAGCCTTGAA
CAATGACATGCTTGCTACCGACAATGCTGAGCAGCATCACATTATCAAAG
ATGCAATAGCCCTTCTACGCCGTTGTTTCTGCAGATACAACCATGCCCGA
GACGCGGCTTCCATCCTCGCATGGGTTGCAACAGTTGATAAAAAGTTCGT
CCATGCTCTGAGATGCCGTCAAACTCTCGCACTGCTAGTTCTCATGCACT
GGGGTGCTCTCCTCCATGAGCTTGATGGGAAAGTATGGTGGGCAAAGAAT
TCTGGAAAAGCTCTGGTTTCGGAGCTGCTGAATGCGCTTCGTCCCTGCGA
CGTGCGGTGGGAAGGGGCATTGCAGTGGCCACAACGTAAAATAGGACTTT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_239482M747DRAFT_239482Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_239482-T1.exon1M747DRAFT_239482-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_239482-T1.exon2M747DRAFT_239482-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_239482-T1.cdsM747DRAFT_239482-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_239482-T1M747DRAFT_239482-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductC6 transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851919.1supercontigKZ851919.1:231924..233247 +