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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851919.1:231924..233247+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1324bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGGTAAGCACCGTCCAGTTTCATACATTATCAT
ATCCCGTATCTCCTGGATTACGCCTGTGTTGATTAGCCGAAAACTGTCCA
GTTCTGGAACTATTCAATACCCGTCTAATTCACTGTCATCCTTGCAGCAC
TCTTCTAACGGCTATAGTGCGATGAACGAGGCCCACCATGCTCCAATTGC
ATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGCAA
GGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATTAG
TAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCCAT
GGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATGCA
CAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGACC
ACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACTTC
CTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACACT
TGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCACA
ATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAGCC
AATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGCAT
AACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGACCG
AAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCTTT
ACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGAGG
CTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGCAC
TGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATGCT
GAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGTTT
CTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGTTG
CAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTCTC
GCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGATGG
GAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCTGC
TGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGTGG
CCACAACGTAAAATAGGACTTTGA back to topCoding sequence (CDS) from alignment at KZ851919.1:231924..233247+ >M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGTGCGATGAACGAGGCCCACCATGCTCCAATT
GCATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGC
AAGGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATT
AGTAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCC
ATGGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATG
CACAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGA
CCACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACT
TCCTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACA
CTTGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCA
CAATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAG
CCAATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGC
ATAACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGAC
CGAAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCT
TTACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGA
GGCTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGC
ACTGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATG
CTGAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGT
TTCTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGT
TGCAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTC
TCGCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGAT
GGGAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCT
GCTGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGT
GGCCACAACGTAAAATAGGACTTTGAATGCCGCCCAGAAGGACCCATACC
AAGTCGCGCAATGGCTGTGACCAGTGTAAGAAGAGACGCGTCAAGTGCGA
TGAACGAGGCCCACCATGCTCCAATTGCATTAGCCGGGAGCTGGCATGTA
CTTATTATAAGACCCCCGCGGCACGCAAGGAGACTACACTATCGACAAGT
CCTGCTCCTTTGCAGTCCGCCAGATTAGTAGCACCCTCTGATGCAACACT
TCATGCCAACCAGCCCTTCTCCCGCCATGGATCTTCACCTCCAAACCTTG
CTTGCCTGCGGGAGCTTGAGCTAATGCACAAGTTTTCCACGGAGACCTAT
CAAAGCCTTTGCAATGAACCAACAGACCACCACGAATGGCAGTATGTTAT
CCCTCGCAAAGCTTTGCAGCACGACTTCCTCATGAGCGGGATACTAGCGG
TTGCATCGCTCCATATCGCGTCGACACTTGATCCACCAGAAGCACTCTCC
TATATTGACACAGCTCTGGAGTACCACAATCTTGCATTTGCACCTTTTCG
CCATGCAATTGATAATATTAATCCAGCCAATTGTGACGCAGTCCTAACTC
ACTCGGTCATTATAACTGTTATTGGCATAACATTACCACAATCGGCTGTT
GCACGAGAAGAGAGTCAAAGCATGACCGAAAATATTATTGTCGTTTTCGA
GTTGCTGCACGGTGTCAGTAAGATCTTTACCATCAGTCGTCCTTGGCTTC
AAGGAAAGGTGTTCACTTCCCGGAGAGGCTTCTGGGAAAATCAGCTTTCC
ATACTAGACAGTGAAATCGAGGCTGCACTGGATCGATTAACAGCCTTGAA
CAATGACATGCTTGCTACCGACAATGCTGAGCAGCATCACATTATCAAAG
ATGCAATAGCCCTTCTACGCCGTTGTTTCTGCAGATACAACCATGCCCGA
GACGCGGCTTCCATCCTCGCATGGGTTGCAACAGTTGATAAAAAGTTCGT
CCATGCTCTGAGATGCCGTCAAACTCTCGCACTGCTAGTTCTCATGCACT
GGGGTGCTCTCCTCCATGAGCTTGATGGGAAAGTATGGTGGGCAAAGAAT
TCTGGAAAAGCTCTGGTTTCGGAGCTGCTGAATGCGCTTCGTCCCTGCGA
CGTGCGGTGGGAAGGGGCATTGCAGTGGCCACAACGTAAAATAGGACTTT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851919.1 | supercontig | KZ851919.1:231924..233247 + |
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