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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851919.1:231924..233247+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1324bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496) ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGGTAAGCACCGTCCAGTTTCATACATTATCAT
ATCCCGTATCTCCTGGATTACGCCTGTGTTGATTAGCCGAAAACTGTCCA
GTTCTGGAACTATTCAATACCCGTCTAATTCACTGTCATCCTTGCAGCAC
TCTTCTAACGGCTATAGTGCGATGAACGAGGCCCACCATGCTCCAATTGC
ATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGCAA
GGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATTAG
TAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCCAT
GGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATGCA
CAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGACC
ACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACTTC
CTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACACT
TGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCACA
ATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAGCC
AATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGCAT
AACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGACCG
AAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCTTT
ACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGAGG
CTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGCAC
TGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATGCT
GAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGTTT
CTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGTTG
CAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTCTC
GCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGATGG
GAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCTGC
TGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGTGG
CCACAACGTAAAATAGGACTTTGA back to topCoding sequence (CDS) from alignment at KZ851919.1:231924..233247+ >M747DRAFT_239482-T1 ID=M747DRAFT_239482-T1|Name=M747DRAFT_239482-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851919.1:231924..233247+ (Aspergillus niger ATCC 13496) ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG TAAGAAGAGACGCGTCAAGTGCGATGAACGAGGCCCACCATGCTCCAATT GCATTAGCCGGGAGCTGGCATGTACTTATTATAAGACCCCCGCGGCACGC AAGGAGACTACACTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATT AGTAGCACCCTCTGATGCAACACTTCATGCCAACCAGCCCTTCTCCCGCC ATGGATCTTCACCTCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTAATG CACAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGA CCACCACGAATGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGACT TCCTCATGAGCGGGATACTAGCGGTTGCATCGCTCCATATCGCGTCGACA CTTGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCA CAATCTTGCATTTGCACCTTTTCGCCATGCAATTGATAATATTAATCCAG CCAATTGTGACGCAGTCCTAACTCACTCGGTCATTATAACTGTTATTGGC ATAACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAAAGCATGAC CGAAAATATTATTGTCGTTTTCGAGTTGCTGCACGGTGTCAGTAAGATCT TTACCATCAGTCGTCCTTGGCTTCAAGGAAAGGTGTTCACTTCCCGGAGA GGCTTCTGGGAAAATCAGCTTTCCATACTAGACAGTGAAATCGAGGCTGC ACTGGATCGATTAACAGCCTTGAACAATGACATGCTTGCTACCGACAATG CTGAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGT TTCTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGT TGCAACAGTTGATAAAAAGTTCGTCCATGCTCTGAGATGCCGTCAAACTC TCGCACTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGAT GGGAAAGTATGGTGGGCAAAGAATTCTGGAAAAGCTCTGGTTTCGGAGCT GCTGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGT GGCCACAACGTAAAATAGGACTTTGAATGCCGCCCAGAAGGACCCATACC AAGTCGCGCAATGGCTGTGACCAGTGTAAGAAGAGACGCGTCAAGTGCGA TGAACGAGGCCCACCATGCTCCAATTGCATTAGCCGGGAGCTGGCATGTA CTTATTATAAGACCCCCGCGGCACGCAAGGAGACTACACTATCGACAAGT CCTGCTCCTTTGCAGTCCGCCAGATTAGTAGCACCCTCTGATGCAACACT TCATGCCAACCAGCCCTTCTCCCGCCATGGATCTTCACCTCCAAACCTTG CTTGCCTGCGGGAGCTTGAGCTAATGCACAAGTTTTCCACGGAGACCTAT CAAAGCCTTTGCAATGAACCAACAGACCACCACGAATGGCAGTATGTTAT CCCTCGCAAAGCTTTGCAGCACGACTTCCTCATGAGCGGGATACTAGCGG TTGCATCGCTCCATATCGCGTCGACACTTGATCCACCAGAAGCACTCTCC TATATTGACACAGCTCTGGAGTACCACAATCTTGCATTTGCACCTTTTCG CCATGCAATTGATAATATTAATCCAGCCAATTGTGACGCAGTCCTAACTC ACTCGGTCATTATAACTGTTATTGGCATAACATTACCACAATCGGCTGTT GCACGAGAAGAGAGTCAAAGCATGACCGAAAATATTATTGTCGTTTTCGA GTTGCTGCACGGTGTCAGTAAGATCTTTACCATCAGTCGTCCTTGGCTTC AAGGAAAGGTGTTCACTTCCCGGAGAGGCTTCTGGGAAAATCAGCTTTCC ATACTAGACAGTGAAATCGAGGCTGCACTGGATCGATTAACAGCCTTGAA CAATGACATGCTTGCTACCGACAATGCTGAGCAGCATCACATTATCAAAG ATGCAATAGCCCTTCTACGCCGTTGTTTCTGCAGATACAACCATGCCCGA GACGCGGCTTCCATCCTCGCATGGGTTGCAACAGTTGATAAAAAGTTCGT CCATGCTCTGAGATGCCGTCAAACTCTCGCACTGCTAGTTCTCATGCACT GGGGTGCTCTCCTCCATGAGCTTGATGGGAAAGTATGGTGGGCAAAGAAT TCTGGAAAAGCTCTGGTTTCGGAGCTGCTGAATGCGCTTCGTCCCTGCGA CGTGCGGTGGGAAGGGGCATTGCAGTGGCCACAACGTAAAATAGGACTTT GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851919.1 | supercontig | KZ851919.1:231924..233247 + |
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