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M747DRAFT_240324-T1, M747DRAFT_240324-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_240324-T1
Unique NameM747DRAFT_240324-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:87003..88298+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_240324-T1 ID=M747DRAFT_240324-T1|Name=M747DRAFT_240324-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1296bp|location=Sequence derived from alignment at KZ851922.1:87003..88298+ (Aspergillus niger ATCC 13496)
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTAAGTTACTGCGCCTCCACGCGCGATTCTTCACATCTC
ACAATGAACAGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTC
GACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGGTGAGTATACCGTCCT
TTAAGGTACGGATGTGGACACTGATGGGAACCAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGTAAGATTTATTCCATCAAGGTTGTAGTTCGGTGCG
ATCACATACTAAGCGGCGTATAGGAGTCCGCATCAAGACCATCTACGGCG
ACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGAT
ATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAA
ATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGC
AGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCA
GACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAA
GACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Coding sequence (CDS) from alignment at KZ851922.1:87003..88298+

>M747DRAFT_240324-T1 ID=M747DRAFT_240324-T1|Name=M747DRAFT_240324-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4548bp|location=Sequence derived from alignment at KZ851922.1:87003..88298+ (Aspergillus niger ATCC 13496)
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTC
GACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGGCGACACTGGAT
CGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGATATCACCGAC
TATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAAATCCCCGAC
CGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTG
TGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGTTGC
ACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTC
CGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTA
GCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCACGT
CATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTC
TTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGATGGCGCC
TATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAACGG
CGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCA
CGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATT
GACGGGTCGACGTATCTTACCATGGAGGACATCACCATTGACAACACGGA
TGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTCGACATTGGTGATA
GCACGTACATTACCATCACGGGTGCCAATGTATACAACCAAGATGACTGT
GTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTC
TGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAACA
CCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAAGAGCTCTCAGAAC
GGAGTCCGCATCAAGACCATCTACGGCGACACTGGATCGGTCAGTGAGGT
CACCTACAAGGAGATTACCCTGTCCGATATCACCGACTATGGCATTGTGG
TGGAGCAAAACTATGACGATACGAGCAAATCCCCGACCGATGGAATCACC
ATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGG
CACCAACATCTACATCGTCTGCGGATCAGACAGTTGCACGGACTGGACTT
GGACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAAT
GTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGT
CCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGC
TGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCC
TGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGAC
CTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCA
CGTTGGATCTGACCGATCTGAACGACGGGACTCACGTCATCTTCGAAGGC
GAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTC
CGGAACTGACATCACCGTCACCGGGGCCGATGGCGCCTATCTCAACGGTG
ACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAACGGCGGCAAGACGAAG
CCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGGAT
CTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGT
ATCTTACCATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGC
GAGGCGGCCAACACCGATGGGTTCGACATTGGTGATAGCACGTACATTAC
CATCACGGGTGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACT
CGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGG
CTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAACACCGTGAAGAACGT
GACCTTCTACGACTCGGAGATCAAGAGCTCTCAGAACGGAGTCCGCATCA
AGACCATCTACGGCGACACTGGATCGGTCAGTGAGGTCACCTACAAGGAG
ATTACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAAAACTA
TGACGATACGAGCAAATCCCCGACCGATGGAATCACCATCGAAGACTTTG
TCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTAC
ATCGTCTGCGGATCAGACAGTTGCACGGACTGGACTTGGACGGATGTGGA
TGTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATA
TCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGG
GCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGC
CCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCG
GCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACC
ATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGAC
CGATCTGAACGACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCG
GTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATC
ACCGTCACCGGGGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTG
GTGGGATGGCGAGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCT
ACGCCCATGATCTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAAC
TCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGA
GGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACA
CCGATGGGTTCGACATTGGTGATAGCACGTACATTACCATCACGGGTGCC
AATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACAT
TTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTT
CCGTCGGCGGTCGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGAC
TCGGAGATCAAGAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGG
CGACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCG
ATATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGC
AAATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGT
GCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGAT
CAGACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGG
AAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_240324M747DRAFT_240324Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_240324-T1.exon1M747DRAFT_240324-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_240324-T1.exon2M747DRAFT_240324-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_240324-T1.exon3M747DRAFT_240324-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_240324-T1.exon4M747DRAFT_240324-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_240324-T1.cdsM747DRAFT_240324-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_240324-T1M747DRAFT_240324-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productpolygalacturonase E precursor pgaE
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:87003..88298 +
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