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M747DRAFT_245791-T1, M747DRAFT_245791-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_245791-T1
Unique NameM747DRAFT_245791-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851942.1:293433..294201+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_245791-T1 ID=M747DRAFT_245791-T1|Name=M747DRAFT_245791-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=769bp|location=Sequence derived from alignment at KZ851942.1:293433..294201+ (Aspergillus niger ATCC 13496)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTAT
GTATTCTTATATTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGG
GTAGAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGT
ATAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGT
TGTTGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAGTGGATTTGCT
CCTAATCATTGGGTGATGCTGGTATGGTATGGTGGCTAATGGTTCGGCTG
GAATAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAAT
GTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGA
GGGTGTCAAGTTCTTCTAG
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Coding sequence (CDS) from alignment at KZ851942.1:293433..294201+

>M747DRAFT_245791-T1 ID=M747DRAFT_245791-T1|Name=M747DRAFT_245791-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1755bp|location=Sequence derived from alignment at KZ851942.1:293433..294201+ (Aspergillus niger ATCC 13496)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGG
AAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAG
GGGGAGGCCACGATGTCGCAAGAATGGCATGGGATGGACCCCGATGTGAT
GCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCG
GTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACA
ACATCAACAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACTC
ATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCCC
AACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCGC
GTCTACCGACTATCGTTAATCGAAGCCATCGAGTCACCATTATTCCATAA
CACGACGCTCCGAAAGCGCATCTCGATGAGCGATGCGCGGGATATTCTAG
ACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAG
TGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCC
TGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGGAAAACACTGGCCAGA
AGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATG
TCGCAAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAA
TGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGG
AGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACAACATCAACAACAACA
ACAACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTT
CACCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGT
CTTCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCG
TTAATCGAAGCCATCGAGTCACCATTATTCCATAACACGACGCTCCGAAA
GCGCATCTCGATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAA
GTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGG
AGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGG
GTTGATTGCGGATTGGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTA
CGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGAATGGCAT
GGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACG
GGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCT
TCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_245791M747DRAFT_245791Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_245791-T1.exon1M747DRAFT_245791-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_245791-T1.exon2M747DRAFT_245791-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_245791-T1.exon3M747DRAFT_245791-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_245791-T1.cdsM747DRAFT_245791-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_245791-T1M747DRAFT_245791-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR014041
DBxrefInterPro:IPR008570
DBxrefPFAM:PF05871
Product vps25 subunit
ProductESCRT-II complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851942.1supercontigKZ851942.1:293433..294201 +
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