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M747DRAFT_246523-T1, M747DRAFT_246523-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_246523-T1
Unique NameM747DRAFT_246523-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:43279..44633+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_246523-T1 ID=M747DRAFT_246523-T1|Name=M747DRAFT_246523-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1355bp|location=Sequence derived from alignment at KZ851945.1:43279..44633+ (Aspergillus niger ATCC 13496)
ATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCATCGTCCTGGA
CGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACGCTGCTCGCAC
AATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGAAATCCGTGAC
CCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCTTCTTGAAGCA
GCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAATTTGCACGCA
AGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGAGGTACTGGCG
CTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACTGGAGACTGAG
AAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCGGTGAAGGAGG
AGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGAGGCCAAGGGT
GAGACTGAGGGCGAGACCACTCAAAAGGAGGAGAACAAGGACGAGGTTGC
TGAGGTGGATGCCGTTGCAGAAGATCTGAAGAACGCAAACCTGGAAGACA
AGGAGACCAGCACACAGGAGACCGAAGTGCAAAATGCCCCCGCAGAGGTC
GAGGCGGAGGAATCAACTCCTCAGGACGCCGATGCCCAAGAGGAGGAAGA
TGATGGCGATGATTCGGATGGTGGTTGGATCACTCCCTCCAACTTGAAGA
AGCGACAGGCCCGCGATGAGGCTAGCTCTGCGGCTGCGGCGCCAGAGCCC
AAGGTGATGCAGGTTGCCACCATGACTACCGATTTTGCGGTATGCTTTGA
AACTTACTTCAATGTCCATGTTCCTTACTAACTATAATAAAGTGCCAAAA
CGTGCTGCTGCAGATGAACTTGAACTTGCTCTCCACTTCCACTCTGCAGC
GAATCCGCCATCTGAAGTCTTTCATCAAGCGCTGCCATGCCTGTTTCTTC
ACCACCAAGGACATGAACAAGCAATTTTGTCCCCGCTGCGGCAAGGACAC
GCTCACTCGTGTCTCCTGCACGACAGACGCGAATGGACAGTTCAAGATGC
ACCTGAAAAAGAACATGCAGTGGAACAACCGCGGCAATCGTTTCAGTGTT
CCTAAGCCCGTACACGGCACCTCCAATGGAAAGTGGAAGGGAGGTGGTGG
TAAGGGTGGCTGGGGAACGGAATTGATCCTGGCGGAAGACCAGAAGGAGT
ATGTTCGAGCCACCGCAGAGCAGAGCCGCAGAATGCGCAAGGAGCACGAC
CTCATGGATGAGGACTACCTCCCGAGCATCCTGACCGGAGAGCGGAACAA
TCACGGTCGAATTCGTGTGGGAGCTGGCAGAAATGTCAACTCGAGGAAGC
GGTAA
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Coding sequence (CDS) from alignment at KZ851945.1:43279..44633+

>M747DRAFT_246523-T1 ID=M747DRAFT_246523-T1|Name=M747DRAFT_246523-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3690bp|location=Sequence derived from alignment at KZ851945.1:43279..44633+ (Aspergillus niger ATCC 13496)
ATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCATCGTCCTGGA
CGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACGCTGCTCGCAC
AATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGAAATCCGTGAC
CCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCTTCTTGAAGCA
GCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAATTTGCACGCA
AGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGAGGTACTGGCG
CTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACTGGAGACTGAG
AAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCGGTGAAGGAGG
AGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGAGGCCAAGGAA
GATCTGAAGAACGCAAACCTGGAAGACAAGGAGACCAGCACACAGGAGAC
CGAAGTGCAAAATGCCCCCGCAGAGGTCGAGGCGGAGGAATCAACTCCTC
AGGACGCCGATGCCCAAGAGGAGGAAGATGATGGCGATGATTCGGATGGT
GGTTGGATCACTCCCTCCAACTTGAAGAAGCGACAGGCCCGCGATGAGGC
TAGCTCTGCGGCTGCGGCGCCAGAGCCCAAGGTGATGCAGGTTGCCACCA
TGACTACCGATTTTGCGTGCCAAAACGTGCTGCTGCAGATGAACTTGAAC
TTGCTCTCCACTTCCACTCTGCAGCGAATCCGCCATCTGAAGTCTTTCAT
CAAGCGCTGCCATGCCTGTTTCTTCACCACCAAGGACATGAACAAGCAAT
TTTGTCCCCGCTGCGGCAAGGACACGCTCACTCGTGTCTCCTGCACGACA
GACGCGAATGGACAGTTCAAGATGCACCTGAAAAAGAACATGCAGTGGAA
CAACCGCGGCAATCGTTTCAGTGTTCCTAAGCCCGTACACGGCACCTCCA
ATGGAAAGTGGAAGGGAGGTGGTGGTAAGGGTGGCTGGGGAACGGAATTG
ATCCTGGCGGAAGACCAGAAGGAGTATGTTCGAGCCACCGCAGAGCAGAG
CCGCAGAATGCGCAAGGAGCACGACCTCATGGATGAGGACTACCTCCCGA
GCATCCTGACCGGAGAGCGGAACAATCACGGTCGAATTCGTGTGGGAGCT
GGCAGAAATGTCAACTCGAGGAAGCGGTAAATGACGGACTCGGCATCGCC
TGCGAAGCCCGTCCATACCATCGTCCTGGACGCCGGTCCCATCTTGAAGA
ATACCCCGCCGCTATCCACGCTGCTCGCACAATGCGAAGAACTCCTCATC
ACCCCCTCCGTCGTGAGCGAAATCCGTGACCCTGACGCCCGCCAGCGCGT
GGAGACACTATACCTTCCCTTCTTGAAGCAGCGCACACCATCCCCGAAAA
GCGTCAGCGTCTTGAGCGAATTTGCACGCAAGACTGGTGATCGGGCTGTC
CTGAGTAAAACAGATATTGAGGTACTGGCGCTTGCATACGAGGTGGAATG
CGAGCGCAATGGTGGCGACTGGAGACTGAGAAGCGTTCCGGGGCAGAAAC
AGGTGAACGGGAAGCCTCCGGTGAAGGAGGAGAAGGCCGAAGAGAAGGGA
GAGGAGGCTAAAGCCGAAGAGGCCAAGGAAGATCTGAAGAACGCAAACCT
GGAAGACAAGGAGACCAGCACACAGGAGACCGAAGTGCAAAATGCCCCCG
CAGAGGTCGAGGCGGAGGAATCAACTCCTCAGGACGCCGATGCCCAAGAG
GAGGAAGATGATGGCGATGATTCGGATGGTGGTTGGATCACTCCCTCCAA
CTTGAAGAAGCGACAGGCCCGCGATGAGGCTAGCTCTGCGGCTGCGGCGC
CAGAGCCCAAGGTGATGCAGGTTGCCACCATGACTACCGATTTTGCGTGC
CAAAACGTGCTGCTGCAGATGAACTTGAACTTGCTCTCCACTTCCACTCT
GCAGCGAATCCGCCATCTGAAGTCTTTCATCAAGCGCTGCCATGCCTGTT
TCTTCACCACCAAGGACATGAACAAGCAATTTTGTCCCCGCTGCGGCAAG
GACACGCTCACTCGTGTCTCCTGCACGACAGACGCGAATGGACAGTTCAA
GATGCACCTGAAAAAGAACATGCAGTGGAACAACCGCGGCAATCGTTTCA
GTGTTCCTAAGCCCGTACACGGCACCTCCAATGGAAAGTGGAAGGGAGGT
GGTGGTAAGGGTGGCTGGGGAACGGAATTGATCCTGGCGGAAGACCAGAA
GGAGTATGTTCGAGCCACCGCAGAGCAGAGCCGCAGAATGCGCAAGGAGC
ACGACCTCATGGATGAGGACTACCTCCCGAGCATCCTGACCGGAGAGCGG
AACAATCACGGTCGAATTCGTGTGGGAGCTGGCAGAAATGTCAACTCGAG
GAAGCGGTAAATGACGGACTCGGCATCGCCTGCGAAGCCCGTCCATACCA
TCGTCCTGGACGCCGGTCCCATCTTGAAGAATACCCCGCCGCTATCCACG
CTGCTCGCACAATGCGAAGAACTCCTCATCACCCCCTCCGTCGTGAGCGA
AATCCGTGACCCTGACGCCCGCCAGCGCGTGGAGACACTATACCTTCCCT
TCTTGAAGCAGCGCACACCATCCCCGAAAAGCGTCAGCGTCTTGAGCGAA
TTTGCACGCAAGACTGGTGATCGGGCTGTCCTGAGTAAAACAGATATTGA
GGTACTGGCGCTTGCATACGAGGTGGAATGCGAGCGCAATGGTGGCGACT
GGAGACTGAGAAGCGTTCCGGGGCAGAAACAGGTGAACGGGAAGCCTCCG
GTGAAGGAGGAGAAGGCCGAAGAGAAGGGAGAGGAGGCTAAAGCCGAAGA
GGCCAAGGAAGATCTGAAGAACGCAAACCTGGAAGACAAGGAGACCAGCA
CACAGGAGACCGAAGTGCAAAATGCCCCCGCAGAGGTCGAGGCGGAGGAA
TCAACTCCTCAGGACGCCGATGCCCAAGAGGAGGAAGATGATGGCGATGA
TTCGGATGGTGGTTGGATCACTCCCTCCAACTTGAAGAAGCGACAGGCCC
GCGATGAGGCTAGCTCTGCGGCTGCGGCGCCAGAGCCCAAGGTGATGCAG
GTTGCCACCATGACTACCGATTTTGCGTGCCAAAACGTGCTGCTGCAGAT
GAACTTGAACTTGCTCTCCACTTCCACTCTGCAGCGAATCCGCCATCTGA
AGTCTTTCATCAAGCGCTGCCATGCCTGTTTCTTCACCACCAAGGACATG
AACAAGCAATTTTGTCCCCGCTGCGGCAAGGACACGCTCACTCGTGTCTC
CTGCACGACAGACGCGAATGGACAGTTCAAGATGCACCTGAAAAAGAACA
TGCAGTGGAACAACCGCGGCAATCGTTTCAGTGTTCCTAAGCCCGTACAC
GGCACCTCCAATGGAAAGTGGAAGGGAGGTGGTGGTAAGGGTGGCTGGGG
AACGGAATTGATCCTGGCGGAAGACCAGAAGGAGTATGTTCGAGCCACCG
CAGAGCAGAGCCGCAGAATGCGCAAGGAGCACGACCTCATGGATGAGGAC
TACCTCCCGAGCATCCTGACCGGAGAGCGGAACAATCACGGTCGAATTCG
TGTGGGAGCTGGCAGAAATGTCAACTCGAGGAAGCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000469cleavage involved in rRNA processing
GO:0042274ribosomal small subunit biogenesis
Vocabulary: Molecular Function
TermDefinition
GO:0004521endoribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_246523M747DRAFT_246523Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246523-T1.exon1M747DRAFT_246523-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_246523-T1.exon2M747DRAFT_246523-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_246523-T1.exon3M747DRAFT_246523-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246523-T1.cdsM747DRAFT_246523-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246523-T1M747DRAFT_246523-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092620U5
DBxrefInterPro:IPR014881
DBxrefInterPro:IPR033411
DBxrefInterPro:IPR017117
DBxrefInterPro:IPR036283
DBxrefPFAM:PF17146
DBxrefPFAM:PF08772
ProductD-site 20S pre-rRNA nuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:43279..44633 +
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