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M747DRAFT_246571-T1, M747DRAFT_246571-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_246571-T1
Unique NameM747DRAFT_246571-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851945.1:45009..45290-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_246571-T1 ID=M747DRAFT_246571-T1|Name=M747DRAFT_246571-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=282bp|location=Sequence derived from alignment at KZ851945.1:45009..45290- (Aspergillus niger ATCC 13496)
ATGCACAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAA
GAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTT
TCTCTCCCGATGACAAGTACTCTCGGTAGGTTCTTTTCGCCGACGATCTC
CAGGCACATTGGAGAGAATTTGTGGACTAATGATATTGGCTATTTAGGCA
CCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCG
GTATGAAACCCCGAGTGCGAGTCCCCATATAG
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Coding sequence (CDS) from alignment at KZ851945.1:45009..45290-

>M747DRAFT_246571-T1 ID=M747DRAFT_246571-T1|Name=M747DRAFT_246571-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=420bp|location=Sequence derived from alignment at KZ851945.1:45009..45290- (Aspergillus niger ATCC 13496)
GCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAG
CCGGTATGAAACCCCGAGTGCGAGTCCCCATATAGATGCACAAAGACTCT
CTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGGA
CGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGACA
AGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATG
ACCCAGCAAGCCGGTATGAAACCCCGAGTGCGAGTCCCCATATAGATGCA
CAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGG
TTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCT
CCCGATGACAAGTACTCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP10M747DRAFT_246571Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246571-T1M747DRAFT_246571-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246571-T1.cdsM747DRAFT_246571-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_246571-T1.exon2M747DRAFT_246571-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_246571-T1.exon1M747DRAFT_246571-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR036756
DBxrefInterPro:IPR007264
DBxrefPFAM:PF04135
ProductsnoRNP complex protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851945.1supercontigKZ851945.1:45009..45290 -
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