You are here

Home

M747DRAFT_250887-T1, M747DRAFT_250887-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_250887-T1
Unique NameM747DRAFT_250887-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:474654..476240+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_250887-T1 ID=M747DRAFT_250887-T1|Name=M747DRAFT_250887-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1587bp|location=Sequence derived from alignment at KZ851899.1:474654..476240+ (Aspergillus niger ATCC 13496)
CCGGCCGGCGCAAAGTGTGACTCAATTCCTCCGCGTGCGGGGAACCGGTT
CCAGAAACGCTTATCATCCCCTCAATCTCCGCCAACACTATCATCACACC
ACTTGCATACACACATACACACAATCCAACCAGTCTGCAAAGACAATCAC
AATCACAGCATAATGGCCGAAAAAGAAACCATTGTCGTAATAGGGTACGT
CGTATCCCAATGCCACCCCCTCAACCACAACAACAGCACCACTAACCACC
CCCACCCATTCCAACCAAACAGAGCCGGCATAATCGGCCTCACAACAGCC
CTCTACATCCAACAACGCCTCTCCCCATCCCAACGCGTCCTCATTGCAGC
CCGAGATTTTCCTCACAGCACATCCCTAAACTACGCCTCACCCTGGGCAG
GCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCCCAACACACCCGAGAA
GAAACACAAGCCCGCCGCACCTATGCACACTTCAAGACACTCGCGGCTCA
GGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCATTGAATACCTCGAGA
ACCCGCCGGCGGAGTACCTCAACGAGAAGAACATCCAGGCTGCGTATGGG
CATTTGGATGGGTTTGAGTACTTACAGCCCGGGCAGATGCCGGGGGATGT
GAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGAATTCTCCCGTGTATT
GTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGTGGGGAGGTGAAAGAG
TACACGTTCGTAGATTTGAGGGAGGGGTTTTATCTCGCGGAGAGGGTGAG
GGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGGATGAAAAGAGTTATA
TTATTCGGGGTGAGTGGTTGTTTTCTCTTGGAGGATCTTGATGTTGCTGA
CTCACTATTCAGGGCAAACGTGTCTGGTGAGGAATCCTTGCTCGGCTACT
ATCACTCGACAGAATAGCGATGGCTCGTGGTCCTTCTGTATTCCACGCCC
ATTGGGTGGTGGGACAATTATTGGGGGCACGAAGCAGCCGCATAATTGGG
ATCCTAATCCGTCAATGGAAACACGGGCCCAGCTATTGGCGAATGCTGCC
AAGTGGTTTCCCTTCGAGGAGGGAAGTAAAGAAGAGTTCGATGTGATTCG
TGATATTGTTGGCCGTCGACCAGCACGAGAGGGGGGCATGAGGATTGAAG
TGGAGAAGATAAATCAAGGTCAGGAAGTGATAGTTCATGCATACGGAGCT
GGGGGTCGTGGTTTTGAATTGTCCTGGGGTGTGGCAGAGGATGTTTACGA
CTTGATGCGACAAAACGGATTAATAAAGGCAAAAGCCTCGCTATAGAGTT
GCCCACCTGAGAGATCCGCCTGACTACAGAAAGTCGCTCGGCTATTGCGC
TACAGGAAGTACATGCGGCATACAAATCTATGAGTGAAAACTGCATGGCA
GCTGCAACTTCGGTAGAAGAAAGATGATACAACTTTTCGTCTATTGTTCG
TAACATTACTTATCACGGAATATGGTCGCCACGGACATTAAAGCATATCC
AAACATCGGAAGGGCCCATTCACACAGGTCGAGTCTC
back to top

Coding sequence (CDS) from alignment at KZ851899.1:474654..476240+

>M747DRAFT_250887-T1 ID=M747DRAFT_250887-T1|Name=M747DRAFT_250887-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3159bp|location=Sequence derived from alignment at KZ851899.1:474654..476240+ (Aspergillus niger ATCC 13496)
ATGGCCGAAAAAGAAACCATTGTCGTAATAGGAGCCGGCATAATCGGCCT
CACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAACGCGTCC
TCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTACGCCTCA
CCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCCCAACA
CACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCAAGACAC
TCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCATTGAA
TACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACATCCAGGC
TGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGCAGATGC
CGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGAATTCT
CCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGTGGGGA
GGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATCTCGCGG
AGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGGATGAA
AAGAGTTATATTATTCGGGGGCAAACGTGTCTGGTGAGGAATCCTTGCTC
GGCTACTATCACTCGACAGAATAGCGATGGCTCGTGGTCCTTCTGTATTC
CACGCCCATTGGGTGGTGGGACAATTATTGGGGGCACGAAGCAGCCGCAT
AATTGGGATCCTAATCCGTCAATGGAAACACGGGCCCAGCTATTGGCGAA
TGCTGCCAAGTGGTTTCCCTTCGAGGAGGGAAGTAAAGAAGAGTTCGATG
TGATTCGTGATATTGTTGGCCGTCGACCAGCACGAGAGGGGGGCATGAGG
ATTGAAGTGGAGAAGATAAATCAAGGTCAGGAAGTGATAGTTCATGCATA
CGGAGCTGGGGGTCGTGGTTTTGAATTGTCCTGGGGTGTGGCAGAGGATG
TTTACGACTTGATGCGACAAAACGGATTAATAAAGGCAAAAGCCTCGCTA
TAGATGGCCGAAAAAGAAACCATTGTCGTAATAGGAGCCGGCATAATCGG
CCTCACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAACGCG
TCCTCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTACGCC
TCACCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGCCCA
ACACACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCAAGA
CACTCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGCATT
GAATACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACATCCA
GGCTGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGCAGA
TGCCGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTGAAT
TCTCCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGGTGG
GGAGGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATCTCG
CGGAGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGGGAT
GAAAAGAGTTATATTATTCGGGGGCAAACGTGTCTGGTGAGGAATCCTTG
CTCGGCTACTATCACTCGACAGAATAGCGATGGCTCGTGGTCCTTCTGTA
TTCCACGCCCATTGGGTGGTGGGACAATTATTGGGGGCACGAAGCAGCCG
CATAATTGGGATCCTAATCCGTCAATGGAAACACGGGCCCAGCTATTGGC
GAATGCTGCCAAGTGGTTTCCCTTCGAGGAGGGAAGTAAAGAAGAGTTCG
ATGTGATTCGTGATATTGTTGGCCGTCGACCAGCACGAGAGGGGGGCATG
AGGATTGAAGTGGAGAAGATAAATCAAGGTCAGGAAGTGATAGTTCATGC
ATACGGAGCTGGGGGTCGTGGTTTTGAATTGTCCTGGGGTGTGGCAGAGG
ATGTTTACGACTTGATGCGACAAAACGGATTAATAAAGGCAAAAGCCTCG
CTATAGATGGCCGAAAAAGAAACCATTGTCGTAATAGGAGCCGGCATAAT
CGGCCTCACAACAGCCCTCTACATCCAACAACGCCTCTCCCCATCCCAAC
GCGTCCTCATTGCAGCCCGAGATTTTCCTCACAGCACATCCCTAAACTAC
GCCTCACCCTGGGCAGGCGCCCACTACCGTCCCGTCCCTGGCTCCAACGC
CCAACACACCCGAGAAGAAACACAAGCCCGCCGCACCTATGCACACTTCA
AGACACTCGCGGCTCAGGAGCCGGGCGCAGGTGTTCAGTCCACTACTGGC
ATTGAATACCTCGAGAACCCGCCGGCGGAGTACCTCAACGAGAAGAACAT
CCAGGCTGCGTATGGGCATTTGGATGGGTTTGAGTACTTACAGCCCGGGC
AGATGCCGGGGGATGTGAAATGGGCTGTGAAGTATAAGACGTTTGTGGTG
AATTCTCCCGTGTATTGTGCGTGGTTGTTGAGGGAGTTTGTGTTGAGGGG
TGGGGAGGTGAAAGAGTACACGTTCGTAGATTTGAGGGAGGGGTTTTATC
TCGCGGAGAGGGTGAGGGCTGTGGTTAATTGTTCTGGGTTGGGGTTTGGG
GATGAAAAGAGTTATATTATTCGGGGGCAAACGTGTCTGGTGAGGAATCC
TTGCTCGGCTACTATCACTCGACAGAATAGCGATGGCTCGTGGTCCTTCT
GTATTCCACGCCCATTGGGTGGTGGGACAATTATTGGGGGCACGAAGCAG
CCGCATAATTGGGATCCTAATCCGTCAATGGAAACACGGGCCCAGCTATT
GGCGAATGCTGCCAAGTGGTTTCCCTTCGAGGAGGGAAGTAAAGAAGAGT
TCGATGTGATTCGTGATATTGTTGGCCGTCGACCAGCACGAGAGGGGGGC
ATGAGGATTGAAGTGGAGAAGATAAATCAAGGTCAGGAAGTGATAGTTCA
TGCATACGGAGCTGGGGGTCGTGGTTTTGAATTGTCCTGGGGTGTGGCAG
AGGATGTTTACGACTTGATGCGACAAAACGGATTAATAAAGGCAAAAGCC
TCGCTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046416D-amino acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0003884D-amino-acid oxidase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_250887M747DRAFT_250887Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_250887-T1M747DRAFT_250887-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_250887-T1.utr5p1M747DRAFT_250887-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_250887-T1.exon1M747DRAFT_250887-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_250887-T1.exon2M747DRAFT_250887-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_250887-T1.exon3M747DRAFT_250887-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_250887-T1.cdsM747DRAFT_250887-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_250887-T1.utr3p1M747DRAFT_250887-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006181
DBxrefInterPro:IPR023209
DBxrefInterPro:IPR006076
DBxrefPFAM:PF01266
ProductFAD dependent oxidoreductase superfamily
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:474654..476240 +
Powered by Drupal