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M747DRAFT_251994-T1, M747DRAFT_251994-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_251994-T1
Unique NameM747DRAFT_251994-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:820255..821860-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_251994-T1 ID=M747DRAFT_251994-T1|Name=M747DRAFT_251994-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1606bp|location=Sequence derived from alignment at KZ851900.1:820255..821860- (Aspergillus niger ATCC 13496)
ATCACCGTCGCAGATCACAAGAGCCACCCCTGGACTCAACATGCCTTCCA
CCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACAAGTGGAAG
GTACGCTATATAACCCAAATCCAAAACATCGAAACACTCGAACCCGACCG
AAACTAACCTGCAAATTTGTTGCGACCAGGTCGAACCCTTCCAAGCCGAA
GACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTT
CCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAA
GAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGT
AGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCT
CAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAAC
AGGTAAATAACCCTGAATTTATGATTTCTAGGTTACCGATAAAGTTACTA
ACACATTAAAACTAAATAGGCCCTCAAAATCCTCGAAGACGACGTCGCAT
GCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTT
AAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTT
GGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAACACGGTCTCCG
CCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGAC
TGCATGGCCAACATCCACCCGATCTACCACATTAAGGAACTCATGATCAA
GCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCCTGGGACCGCT
TCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTC
AAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCC
GGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGT
CCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAG
CGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCC
GCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGA
AGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGAT
GTAGATGGCGACGATGGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAA
GTCCAAGTCGAAAGAGGATGCGTCGGATGGAGAGGCGTGATTCTTCTGCT
GCTGCTGTTGCTGCCTCCACCTTTTGACTTGGTATCTTCTGTCGGTCTCT
ATTTTCTTTCCTTTGCTTCGGTTATCACCCTTCGTATACTACGTTCGATA
TATAAGGCGCTTAGGCATAGCATGGGCTGGAGTTTTCTTTCTTTATTCTT
CTCACTTATGTGCCCCTGCTATTACCGGGAGGGGATATAAAAAAAGCCTG
TGTTGAGTGGGATTGGTCATGTATAACCTACTGAGTTGGGAGCTATTAGT
CTTTCCAGCTGACTTTATTTGATATGGTACGAGAATTAAACAGATATGAG
TTTCAT
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Coding sequence (CDS) from alignment at KZ851900.1:820255..821860-

>M747DRAFT_251994-T1 ID=M747DRAFT_251994-T1|Name=M747DRAFT_251994-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3312bp|location=Sequence derived from alignment at KZ851900.1:820255..821860- (Aspergillus niger ATCC 13496)
GCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGATCCG
CAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTC
TCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACC
TACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGG
TCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATCCACC
CGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGAC
CCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAA
GCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGA
AGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGAT
CTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCG
GCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGA
AGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCA
GAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAA
GAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGATGGTG
CCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGAT
GCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACAATGT
CGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGT
ACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTC
GAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGAC
AGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCC
GTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGATGCCT
TCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACAAGTG
GAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGA
TCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGC
ATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAG
CACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACA
AGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATC
CACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAA
GGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCA
AGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAG
ACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGT
GGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGG
ATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAA
GAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGA
CGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGA
AGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGAT
GGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGA
GGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACA
ATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCC
AAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGC
GCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCA
TGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAG
GCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGAT
GCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACA
AGTGGAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATC
AAGATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCA
ACGCATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCA
CAAGCACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCC
TACAAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAA
CATCCACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGG
CCAAGGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAAC
TTCAAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGA
CAAGACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCA
AGGTGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCG
AAGGATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCG
CGAAGAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGC
TGGACGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAA
GAGAAGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGA
CGATGGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGA
AAGAGGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAA
GACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTT
CCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAA
GAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGT
AGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCT
CAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAAC
AGATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATT
GACAAGTGGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KRR1M747DRAFT_251994Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_251994-T1M747DRAFT_251994-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_251994-T1.cdsM747DRAFT_251994-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_251994-T1.utr3p1M747DRAFT_251994-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_251994-T1.exon3M747DRAFT_251994-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_251994-T1.exon2M747DRAFT_251994-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_251994-T1.exon1M747DRAFT_251994-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_251994-T1.utr5p1M747DRAFT_251994-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263CG4
DBxrefInterPro:IPR041174
DBxrefInterPro:IPR024166
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF17903
Productribosomal RNA assembly protein krr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:820255..821860 -
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