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M747DRAFT_252594-T1, M747DRAFT_252594-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_252594-T1
Unique NameM747DRAFT_252594-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:391661..393613+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_252594-T1 ID=M747DRAFT_252594-T1|Name=M747DRAFT_252594-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1953bp|location=Sequence derived from alignment at KZ851901.1:391661..393613+ (Aspergillus niger ATCC 13496)
TCGGAGCTTCACCAGAACTCCAGTCCGCATACCACTTTCCAGATAACAAT
TCCAATTATCCAGACGATGCCATGTCGCTCCCCGGTCTCGATCTAACACA
ACCCTCCGCGGACCGCGAGTTCGCCCCAGCCCCGCCCTCTCAGATTAGCC
TTCCCAAAGGCTCAGAGTGGCGGTTCGAAGTCGCCTTTGGCACGACCGTC
CGCGTAAAGGTGAGCTGCCGTGACCCCCTCAGCACACTACCCATCCCTCA
CGAATCACAAAAAGGACAGTTGACTGACATATCTACCACCTGGAGAACTA
GCTCTTAGCCGGAACCGCCGAACTCTTCGGCACCGAACTAGCCCCCTCTC
AAACCTACACCTTCTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGA
TGCACACTAGAAGTAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCT
CGCCCCGGGAGGCACGAATGGAACAACAGCGCGCGGACTCGGCGCGGGCG
GCTGCCAGAGCGAGTATGTGGCGGAGGAAACACCGATGGTTGAATACGCG
AACGTGCATTTTGCGCTGGAGACACTACGACAGGAGGCCAAAGCGACGGG
GAAAGATGGCCCGCGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGA
CAAGTCTGTCGAAGATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAG
CCGCTGGTGGTTAATTTGGATCCTACGGAGGGCATGCTAAGTGTTCCGGG
GACGTTGACGGCTACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGAT
GGGGGAGTAGTCCCATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCC
TTGGTGTATTTCTATCCGATGCAGAACCCGTTGGAGGCCGATGGCTCGGT
GTATAAGGCTATTGTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGG
CGGAGGATGAGGATGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGA
ATTTTGAGTCAGAGTAAGGCTGGTAATGTCGAGATGATTAATCATATTGT
GACGGAGTTTGCGAGTGAGTTTTTACTTGATCCTGGTTGGAAGGGTGTAT
GCACTGACGGGGTTATGGCACAGTTACGACGATCTTGGTCATTGGCTCCG
AGCGACTGTACAGCATTATGATGAAGAACTTTGATAACAAGCCCACGGCT
AGTGCGTCTGCAGCGGCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTC
CAAGTCTGGGGGTTGTGTGGATCGCGATGCGGCGTTCATGAAGGCTGTCA
GCGAGTCGCAGATCCGGACATACTTCTTCGGCAACCCAATTCCTTCGACG
GCATCGGCAGCGCTGTCGCTGTCTGCGTCGTCAACGACGAATGTTACGTT
GTCGCCGCATGCGCAGCAGCTAGACTTCAACGCTTTAGCGGTCTACAACT
ACACCATAGCGTCAGCAGAGGAGGACGAAGACGAATATGACCCGTCGCAG
CTGGGTACCGGCGATGCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCT
GGGTCAGACTCCGCAAGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGA
TCGCTGGACCGGTGAAGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTG
CCACTGAAGAAGGTACTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCT
GCTGGCCATTACACATGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCG
ATGCCAGTATCATGGGCTTCTTGTACGTGGCGGACGTGGACGCGGAGAAG
GGCAAGATCCGAGTGCTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGC
GATTGTATGGGGGAAGAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGAT
AGTTGATACCAGAAGTTATTCGTAACTAGATGAGCGCTACATATGAAAGA
TAT
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Coding sequence (CDS) from alignment at KZ851901.1:391661..393613+

>M747DRAFT_252594-T1 ID=M747DRAFT_252594-T1|Name=M747DRAFT_252594-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5040bp|location=Sequence derived from alignment at KZ851901.1:391661..393613+ (Aspergillus niger ATCC 13496)
ATGTCGCTCCCCGGTCTCGATCTAACACAACCCTCCGCGGACCGCGAGTT
CGCCCCAGCCCCGCCCTCTCAGATTAGCCTTCCCAAAGGCTCAGAGTGGC
GGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGCTCTTAGCCGGA
ACCGCCGAACTCTTCGGCACCGAACTAGCCCCCTCTCAAACCTACACCTT
CTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAAG
TAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGGC
ACGAATGGAACAACAGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCGA
GTATGTGGCGGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTTG
CGCTGGAGACACTACGACAGGAGGCCAAAGCGACGGGGAAAGATGGCCCG
CGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGAA
GATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTTA
ATTTGGATCCTACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGCT
ACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTCC
CATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTCT
ATCCGATGCAGAACCCGTTGGAGGCCGATGGCTCGGTGTATAAGGCTATT
GTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGGA
TGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATTTTGAGTCAGA
GTAAGGCTGGTAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGCG
ATTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAGCATTATGAT
GAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAGCGGCGTCGG
ATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGTTGTGTGGAT
CGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGATCCGGACATA
CTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGCTGTCGCTGT
CTGCGTCGTCAACGACGAATGTTACGTTGTCGCCGCATGCGCAGCAGCTA
GACTTCAACGCTTTAGCGGTCTACAACTACACCATAGCGTCAGCAGAGGA
GGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCGATGCCTTCC
TCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCGCAAGAAGAG
GCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGTGAAGGAGAC
GGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGGTACTGCCTC
CTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATTACACATGCAAGC
TCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCATGGGCTTCTT
GTACGTGGCGGACGTGGACGCGGAGAAGGGCAAGATCCGAGTGCTGGCGC
CGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGGAAGAAATGG
CCTGGGGAGGTGGTGGGATTGGTGGGATAGATGTCGCTCCCCGGTCTCGA
TCTAACACAACCCTCCGCGGACCGCGAGTTCGCCCCAGCCCCGCCCTCTC
AGATTAGCCTTCCCAAAGGCTCAGAGTGGCGGTTCGAAGTCGCCTTTGGC
ACGACCGTCCGCGTAAAGCTCTTAGCCGGAACCGCCGAACTCTTCGGCAC
CGAACTAGCCCCCTCTCAAACCTACACCTTCTCCGGCACGAAAGCAGCAA
TCTACACCTGGCATGGATGCACACTAGAAGTAAGCGCCGGAGAGGCCATC
ACAGGTCTGGACAGCCTCGCCCCGGGAGGCACGAATGGAACAACAGCGCG
CGGACTCGGCGCGGGCGGCTGCCAGAGCGAGTATGTGGCGGAGGAAACAC
CGATGGTTGAATACGCGAACGTGCATTTTGCGCTGGAGACACTACGACAG
GAGGCCAAAGCGACGGGGAAAGATGGCCCGCGGGTACTGATTCTCGGTCC
TGAGGATGCGGGCAAGACAAGTCTGTCGAAGATCCTGACGGCGTATGCGA
CTAAGGTGGGCCGGCAGCCGCTGGTGGTTAATTTGGATCCTACGGAGGGC
ATGCTAAGTGTTCCGGGGACGTTGACGGCTACGGCGTTCCGGACGATGAT
TGATGTTGAGGAAGGATGGGGGAGTAGTCCCATGTCCGGGCCGAGTGCGG
TGCCGGTGAAGTTGCCCTTGGTGTATTTCTATCCGATGCAGAACCCGTTG
GAGGCCGATGGCTCGGTGTATAAGGCTATTGTGTCGAGGTTGGCGCTGTC
GGTGACGGGGAGGATGGCGGAGGATGAGGATGCAAGGGAGACGGGAATTA
TTGTGGATACGCCGGGAATTTTGAGTCAGAGTAAGGCTGGTAATGTCGAG
ATGATTAATCATATTGTGACGGAGTTTGCGATTACGACGATCTTGGTCAT
TGGCTCCGAGCGACTGTACAGCATTATGATGAAGAACTTTGATAACAAGC
CCACGGCTAGTGCGTCTGCAGCGGCGTCGGATGAGCGCATTTCGGTGGTT
AAGTTGTCCAAGTCTGGGGGTTGTGTGGATCGCGATGCGGCGTTCATGAA
GGCTGTCAGCGAGTCGCAGATCCGGACATACTTCTTCGGCAACCCAATTC
CTTCGACGGCATCGGCAGCGCTGTCGCTGTCTGCGTCGTCAACGACGAAT
GTTACGTTGTCGCCGCATGCGCAGCAGCTAGACTTCAACGCTTTAGCGGT
CTACAACTACACCATAGCGTCAGCAGAGGAGGACGAAGACGAATATGACC
CGTCGCAGCTGGGTACCGGCGATGCCTTCCTCCCAGGTGGAAGCAACGAC
GTGGACCTGGGTCAGACTCCGCAAGAAGAGGCTCCGGTCGCACCGACGCT
GCCTGGGATCGCTGGACCGGTGAAGGAGACGGTGACGCCGGCGGGGTCGT
CCAACGTGCCACTGAAGAAGGTACTGCCTCCTGCGCCGACAGCGCTGGCC
AATTCGCTGCTGGCCATTACACATGCAAGCTCGACGGCCAGCCCGGCGGA
TGTGCGCGATGCCAGTATCATGGGCTTCTTGTACGTGGCGGACGTGGACG
CGGAGAAGGGCAAGATCCGAGTGCTGGCGCCGGTTGGAGGTCGCGTGCCA
CCGCGGGCGATTGTATGGGGGAAGAAATGGCCTGGGGAGGTGGTGGGATT
GGTGGGATAGATGTCGCTCCCCGGTCTCGATCTAACACAACCCTCCGCGG
ACCGCGAGTTCGCCCCAGCCCCGCCCTCTCAGATTAGCCTTCCCAAAGGC
TCAGAGTGGCGGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGCT
CTTAGCCGGAACCGCCGAACTCTTCGGCACCGAACTAGCCCCCTCTCAAA
CCTACACCTTCTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGC
ACACTAGAAGTAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGC
CCCGGGAGGCACGAATGGAACAACAGCGCGCGGACTCGGCGCGGGCGGCT
GCCAGAGCGAGTATGTGGCGGAGGAAACACCGATGGTTGAATACGCGAAC
GTGCATTTTGCGCTGGAGACACTACGACAGGAGGCCAAAGCGACGGGGAA
AGATGGCCCGCGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAA
GTCTGTCGAAGATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCG
CTGGTGGTTAATTTGGATCCTACGGAGGGCATGCTAAGTGTTCCGGGGAC
GTTGACGGCTACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGG
GGAGTAGTCCCATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTG
GTGTATTTCTATCCGATGCAGAACCCGTTGGAGGCCGATGGCTCGGTGTA
TAAGGCTATTGTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGG
AGGATGAGGATGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATT
TTGAGTCAGAGTAAGGCTGGTAATGTCGAGATGATTAATCATATTGTGAC
GGAGTTTGCGATTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACA
GCATTATGATGAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCA
GCGGCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGG
TTGTGTGGATCGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGA
TCCGGACATACTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCG
CTGTCGCTGTCTGCGTCGTCAACGACGAATGTTACGTTGTCGCCGCATGC
GCAGCAGCTAGACTTCAACGCTTTAGCGGTCTACAACTACACCATAGCGT
CAGCAGAGGAGGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGC
GATGCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCC
GCAAGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGG
TGAAGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAG
GTACTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATTAC
ACATGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCA
TGGGCTTCTTGTACGTGGCGGACGTGGACGCGGAGAAGGGCAAGATCCGA
GTGCTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGG
GAAGAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005849mRNA cleavage factor complex
Vocabulary: Biological Process
TermDefinition
GO:0031124mRNA 3'-end processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CLP1M747DRAFT_252594Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252594-T1M747DRAFT_252594-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252594-T1.utr5p1M747DRAFT_252594-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252594-T1.exon1M747DRAFT_252594-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_252594-T1.exon2M747DRAFT_252594-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_252594-T1.exon3M747DRAFT_252594-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252594-T1.cdsM747DRAFT_252594-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252594-T1.utr3p1M747DRAFT_252594-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR028606
DBxrefInterPro:IPR010655
DBxrefInterPro:IPR038238
DBxrefInterPro:IPR032319
DBxrefInterPro:IPR038239
DBxrefInterPro:IPR032324
DBxrefPFAM:PF16575
DBxrefPFAM:PF16573
DBxrefPFAM:PF06807
ProductCleavage polyadenylation factor subunit clp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:391661..393613 +
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