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M747DRAFT_25268-T1, M747DRAFT_25268-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_25268-T1
Unique NameM747DRAFT_25268-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:410626..412638+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_25268-T1 ID=M747DRAFT_25268-T1|Name=M747DRAFT_25268-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2013bp|location=Sequence derived from alignment at KZ851911.1:410626..412638+ (Aspergillus niger ATCC 13496)
CAACCTCCAAGGCCTCGTGGCAATCCCAGACCTTTTTCACACTTTCCTCG
TCGGCTCTCCTTTCACAGCATCACTTCCCGCACTGTGCACGAGTTCACCA
ATCTTCCCACATCCTTCCAAGCATCAGAATTCCCTCTCCATCCGATCGCC
AGCACCAGCAAGTTTTATTGGGAACTCCTGGTGTACATAGTCGATCAAAT
AAAGCTGCAGTGAAAAGAAAAGAAGAGCTGTTCTGAAAAGTGAAAACACA
CTTGGACACGTCCTGCGTAAGTGAAGCAAGCAAGCACAGAAAGTCCGCAC
AGTTTAGGCACACAAACCATCATGTCTGCCTCTCCGTCTGCGTTGCAATC
GACCAAGCGTCCGTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATC
AGCCGGAAGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAGGGCGATGAG
TCCGAGGCGTATGCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGA
TGGCCAGGGCGACACTGTGGTCCCCGATGCTCCTAACTCCAAGGGCGCTC
AGGAGACACAACCCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGT
GCCCAATCCGAGCAACACCGTCCCCAGGATGAGTCTAGCTGGATTCACAT
TCGGGCTGTAATCTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTG
GGGAGAACGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTC
AGCGACTATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCC
CCAGGATGCTGCTGCGAAGGTGAGTTTGAACACGATATGGTTCGATTTTT
CTACTGTCTTTGCTAACCCGGATGCTAGGCCTTCGGTCTTATTATTCGTA
CCTTGAACAATGAGCCCCTTGATGCCCCTTCTACTGCCCAATCCAAGACA
TACCCCTTGCGTTTGTTGATTCCCCATATTCTCATTGGCTCGATCATTGG
CAAGGGTGGGAGCCGTATTCGAGAGATCCAGGACGCCTCTGGTGCACGTC
TCAACGCTTCTGATGCTTGCCTTCCCCTGTCTACTGAACGGTCCCTTGTT
ATTCTCGGTGTTGCTGACGCAGTGCACATCGCTACCTACTACGTTGCCGT
GACTCTCGTCGAGCAGCTGACAGAACGCTTCGGCGGCCCCGCTGCCTCGG
CCTATGCCACCCGCAGCGGCGGTCCTGCTGGCGCTGTGCCTGGCGGCATG
CAGGTTGTGCCGTACGTGCCTCAGCCCGCTGGTGGGCAGTACGGCCATCC
CGACACCTTCAAGCGTCACCACCCTCACCCCAACCGCGGCGCAGCTGGCG
GCTATGGCGTTCCTTACCTCCAGGGCCCGGCAGCGCAAACTCCTGTAGCC
CAGCCCTCGATGCCCTACGGTGCTACTCCCCACACCCCGTATGCTGGCGC
TGGCCCGCACCAGCCCGCGCCCTACGGTGCGCCTCAGGCGGCCGCCGCAC
AGGCTCGTGGTGGGCCGACGCCTGCCGCTCCCGTCGGCGGTGTCATGCCC
GGCCAGCCACTGACCCAGCAGATCTACATCCCCAACGACATGGTTGGCGC
CATCATTGGAAAGGGAGGAGCCAAGATCAACGAGATCCGTCACCTGAGTG
GCAGTGTCATCAAGATCAACGAGCCCCAGGAGAACAGCAACGAGCGTCTG
GTCACGATCACCGGTACCCAGGAGTGCAACCAGATGGCGCTCTACATGCT
CTACTCGAGACTTGGTTAGTATCCTTCCCAAACTATGTGAAATGACCCCT
TCTAACATCCTGCAGAAAGCGAGAAGCATCGGATCTAGGCTAAGTGAATT
CATCCTGTTTCTGTTCCCGCCGATGAATCGGTTTGCTGTCTTTCTGCTTT
GCGACTACTCCAAAAGTCATCCGTTATATTCCGGTGGCTCTGATAGTTTG
GTTTGGGTTCCGTCTATATCTTTCTTTCGGGGTCTGCGCGTTTTGTTTTC
CTCAATTTCTTTT
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Coding sequence (CDS) from alignment at KZ851911.1:410626..412638+

>M747DRAFT_25268-T1 ID=M747DRAFT_25268-T1|Name=M747DRAFT_25268-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4221bp|location=Sequence derived from alignment at KZ851911.1:410626..412638+ (Aspergillus niger ATCC 13496)
ATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCGTTGGAGGA
CCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTG
CGTTGGACAAAGTAGTAAAGGGCGATGAGTCCGAGGCGTATGCCGATGTG
AAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACTGTGGT
CCCCGATGCTCCTAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGT
CGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACACCGT
CCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCA
GGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCC
GTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCC
GTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGC
CTTCGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGATGCCCCTT
CTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCCCCATATT
CTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGATCCA
GGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCCCTGT
CTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCACATC
GCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAACGCTT
CGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCTGCTG
GCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCCCGCT
GGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACCCTCACCC
CAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGCCCGG
CAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTACTCCC
CACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACGGTGC
GCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCCGCTC
CCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGATCTACATC
CCCAACGACATGGTTGGCGCCATCATTGGAAAGGGAGGAGCCAAGATCAA
CGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCCCAGG
AGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGAGTGCAAC
CAGATGGCGCTCTACATGCTCTACTCGAGACTTGAAAGCGAGAAGCATCG
GATCTAGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCGT
TGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAG
CGTCCTGCGTTGGACAAAGTAGTAAAGGGCGATGAGTCCGAGGCGTATGC
CGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACA
CTGTGGTCCCCGATGCTCCTAACTCCAAGGGCGCTCAGGAGACACAACCC
ATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCA
ACACCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCT
CCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCC
CAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCG
TGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTG
CGAAGGCCTTCGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGAT
GCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCC
CCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAG
AGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTT
CCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGT
GCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAG
AACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGT
CCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCA
GCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACC
CTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAG
GGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGC
TACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCT
ACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCT
GCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGAT
CTACATCCCCAACGACATGGTTGGCGCCATCATTGGAAAGGGAGGAGCCA
AGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAG
CCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGA
GTGCAACCAGATGGCGCTCTACATGCTCTACTCGAGACTTGAAAGCGAGA
AGCATCGGATCTAGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAG
CGTCCGTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGA
AGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAGGGCGATGAGTCCGAGG
CGTATGCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAG
GGCGACACTGTGGTCCCCGATGCTCCTAACTCCAAGGGCGCTCAGGAGAC
ACAACCCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAAT
CCGAGCAACACCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCT
GTAATCTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAA
CGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACT
ATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGAT
GCTGCTGCGAAGGCCTTCGGTCTTATTATTCGTACCTTGAACAATGAGCC
CCTTGATGCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGT
TGATTCCCCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGT
ATTCGAGAGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGC
TTGCCTTCCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTG
ACGCAGTGCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAG
CTGACAGAACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAG
CGGCGGTCCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACG
TGCCTCAGCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGT
CACCACCCTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTA
CCTCCAGGGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCT
ACGGTGCTACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCC
GCGCCCTACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCC
GACGCCTGCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCC
AGCAGATCTACATCCCCAACGACATGGTTGGCGCCATCATTGGAAAGGGA
GGAGCCAAGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGAT
CAACGAGCCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTA
CCCAGGAGTGCAACCAGATGGCGCTCTACATGCTCTACTCGAGACTTGAA
AGCGAGAAGCATCGGATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_25268M747DRAFT_25268Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_25268-T1M747DRAFT_25268-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_25268-T1.utr5p1M747DRAFT_25268-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_25268-T1.exon1M747DRAFT_25268-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_25268-T1.exon2M747DRAFT_25268-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_25268-T1.exon3M747DRAFT_25268-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_25268-T1.cdsM747DRAFT_25268-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_25268-T1.utr3p1M747DRAFT_25268-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004088
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF00013
ProductKH domain RNA binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:410626..412638 +
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