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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:648909..651460- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_253923-T1 ID=M747DRAFT_253923-T1|Name=M747DRAFT_253923-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2552bp|location=Sequence derived from alignment at KZ851903.1:648909..651460- (Aspergillus niger ATCC 13496)
GAGCTTCGCAAATACAGACACGCTCGCGCGCGTTTGGTGTTGAGAGTTGC
ATCGCGACGCGTTCTCATAGTGTTCTTCTTTTCTTTACATACGCACTCAT
CTCCCTCTGTTTCATTCCTCCTACCCCCTCCCGCATCCTCCTGCTACCAT
TATCCTGACCAGCCTTCGAGATTTACCGACCTGTGCATGGTAAATCGCAG
CAATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAG
GTCGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTC
AACATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGG
AGATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCA
GGAAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCAT
TGAGACTGTGGGCTTATCCGATCCCTGTTGAAGCGCTTACTCAATGAGGA
GCTGCTGCTAACTTGTGTTGTCTGATAGTGCATGGAACAGTTCAAGGCAG
TAGAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCT
GCATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTT
CCTATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAG
CGGAAGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTG
GCCAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAA
GTGGCATGTCAACAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCA
ACCTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTAT
GTGGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTA
CGACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAG
GGGACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAG
GAGCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAGAGCGCAGGATTACG
AAGGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTC
ATCCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCG
CCTACCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGC
AGCTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCAC
CTCCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCT
TCAGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAA
GGCCGCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGAT
CAAAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCA
CATACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGC
GACGAACGGTGAGGCGACGAGTAAGCCAGAGGAGCAGGAGCCGGAGCAGG
AGAGCGAGGAATCGATCTTCCACCTGCCTCCCGGCCTGCAGGATCTTATT
CAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGC
CTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCCGG
AGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTTAC
AATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGATCC
GCGCTTGTACGAGACCGGGCGCATCGACACGGATACACTGTTCTACCTGT
TCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGTTG
AAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAACG
TCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATATC
GCTTCTTCGATTATGAGAGTACATGGTAAGTAACCCACTCGGAAATCCCG
AAGACCCGCAGAACCCAGCTAACAATCCTTGCAGGATGAACCGTCGCAAG
GCTGACTTCAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAATCGAA
TTGATACGCAAACATGAGAGGTCTCTGTACATGGCTGGGTTCGATGAAGA
TAAGTGGAAAAGTGCCTCGGTCGGTTGGGTTTGGCTTTATTAGCAAGGAT
GCACGGAAATATGGGAGTTCAGTTTAATCAATGTGTCTATGCAATTGGTA
TTGTGTTGCCATCTGTTTAACGATCTGTTGTTTCATCCAAGTCTTCGGGG
GAGCATGCAGGGACGAGTCTACGAGACACGGGAGTTCTGTGCTGTTCTTA
CATGGTGGCTTATGGGATGCAGCCATGACTTTAGGTAGTGATGCTTGTTG
TTACCGTACATTGACCATTTGAGATGGAATCTTCAAGTTCATAGTACTTG
AC back to topCoding sequence (CDS) from alignment at KZ851903.1:648909..651460- >M747DRAFT_253923-T1 ID=M747DRAFT_253923-T1|Name=M747DRAFT_253923-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5589bp|location=Sequence derived from alignment at KZ851903.1:648909..651460- (Aspergillus niger ATCC 13496)
GATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGAAG
ATGAACTGTAATGCATGGAACAGTTCAAGGCAGTAGAGAAGGAGATGAAG
ACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGCATCGAGATTAGATCC
TAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCCTATCGAATATGGTGG
ACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCGGAAGAGGAAACGCTT
CACATGCAAATGAAGAAGGGCAAGAAGGACGTGGCCAAGACGAATCGCCT
ATCAGACCTTTCACGCTTAACAGAACGCCATAAGTGGCATGTCAACAAGT
TGGAACTGTTGCTACGGTCGCTGCAGAACGGCAACCTCGAAGTTGCTCAG
GTGCTGGATATCAAGGAAAGCATTAAGTACTATGTGGAGGATGGGCACAA
CATTGACTACTCTGGTGAGGATGAAACCTTGTACGACGACCTGAACCTGG
ACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGGGACAACGATAAAGTA
TCCTCGCAAGACACCCAGTCGATCCAAGACGAGGAGCCGGAAATCAAGCC
CAAGGTCAACAAGGGTGAGAGCGCAGGATTACGAAGGCCATCTGCACAGA
TGAAGTCCCCTCTACCTGTGTTAGCAACACTTCATCCGTCGACCTCCACG
ACTGCCGCCTCAGGCATGAAACCCGCACCACCGCCTACCCGCCTCCCCGG
AGAAACACTCAAGTACGCGTCCGCTGCCGCTGCAGCTGCTGCAAGTGACA
AGAACGGGGTGGGCATTGCACCACTTCCGCCACCTCCAGGCGCAAGCCCC
GCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTCAGCCACTGCCTCGCC
GAGCGTTGCATCGGTACAACCTACTACATCCAAGGCCGCGCCGGTTCTCA
CGATAGCGGCGGAGGACATCACCGGTGCACGATCAAAAACACCTTCTGTC
AGCCCCAACGTGGCTGCTGCGAGCACATCGTCACATACAATGGATAAAGT
TGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGACGAACGGTGAGGCGA
CGAGTAAGCCAGAGGAGCAGGAGCCGGAGCAGGAGAGCGAGGAATCGATC
TTCCACCTGCCTCCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCAC
GAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGC
GCATGCTTGCAACATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAG
AAGCCTCGTCATTACAAGCCTCAAAACCCTTACAATACGCCTTTATACTA
TCCTCAGGAACCGCTCTCCATCTTCGATGATCCGCGCTTGTACGAGACCG
GGCGCATCGACACGGATACACTGTTCTACCTGTTCTACTACCGACAAGGC
AGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAAGAACCAGAGCTGGCG
CTTCCACAAACAGTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGA
CGATCACGGAGGAGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAG
AGTACATGATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTC
AAGAAGGTCGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGAT
CCGGTCAACATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGA
AACGGGAGATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGG
GCATCAGGAAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAG
GGCCATTGAGACTGATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCTAC
AAATACTTGGAAGATGAACTGTAATGCATGGAACAGTTCAAGGCAGTAGA
GAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGCAT
CGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCCTA
TCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCGGA
AGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTGGCCA
AGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGTGG
CATGTCAACAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAACCT
CGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGTGG
AGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACGAC
GACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGGGA
CAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGAGC
CGGAAATCAAGCCCAAGGTCAACAAGGGTGAGAGCGCAGGATTACGAAGG
CCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCATCC
GTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCCTA
CCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGCAGCT
GCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCTCC
AGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTCAG
CCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGGCC
GCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCAAA
AACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACATA
CAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGACG
AACGGTGAGGCGACGAGTAAGCCAGAGGAGCAGGAGCCGGAGCAGGAGAG
CGAGGAATCGATCTTCCACCTGCCTCCCGGCCTGCAGGATCTTATTCAGT
CGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCTCC
CCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCCGGAGCC
TGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTTACAATA
CGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGATCCGCGC
TTGTACGAGACCGGGCGCATCGACACGGATACACTGTTCTACCTGTTCTA
CTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAAGA
ACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAACGTCAC
GAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATATCGCTT
CTTCGATTATGAGAGTACATGATGACGTCCCGGAAGACGCAGCAGGAGAT
TGACAAGACCTTCAAGAAGGTCGCTGAAGGCATTCAAACATTCGAGGGTA
TCTATGAGAAGATCCGGTCAACATCAAATATCACGCAACGGGATAAGCTC
GAGGAGAACCTGAAACGGGAGATCAAGAAGTTACAACGATATCGTGACCA
AATCAAGTCATGGGCATCAGGAAACGAGGTCAAGGATAAGGGGCCGCTGC
TAGAGCAGCGCAGGGCCATTGAGACTGATGAACCGTCGCAAGGCTGACTT
CAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAATGCATGGAACAGT
TCAAGGCAGTAGAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGG
TTGTCGGCTGCATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGAC
TTGCGACTTCCTATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGG
CCTTCGAAGCGGAAGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAG
AAGGACGTGGCCAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGA
ACGCCATAAGTGGCATGTCAACAAGTTGGAACTGTTGCTACGGTCGCTGC
AGAACGGCAACCTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATT
AAGTACTATGTGGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGA
AACCTTGTACGACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCG
GCATGACAGGGGACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATC
CAAGACGAGGAGCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAGAGCGC
AGGATTACGAAGGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAG
CAACACTTCATCCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCC
GCACCACCGCCTACCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGC
TGCCGCTGCAGCTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCAC
TTCCGCCACCTCCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCA
AACAAAGCTTCAGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTAC
TACATCCAAGGCCGCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCG
GTGCACGATCAAAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGC
ACATCGTCACATACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGA
GCAACCTGCGACGAACGGTGAGGCGACGAGTAAGCCAGAGGAGCAGGAGC
CGGAGCAGGAGAGCGAGGAATCGATCTTCCACCTGCCTCCCGGCCTGCAG
GATCTTATTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGC
AGCCAACGCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGA
ACTGCCCGGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAA
AACCCTTACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTT
CGATGATCCGCGCTTGTACGAGACCGGGCGCATCGACACGGATACACTGT
TCTACCTGTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCC
AAGGCGTTGAAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTG
GTTCCAACGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGG
GCACATATCGCTTCTTCGATTATGAGAGTACATGATGACGTCCCGGAAGA
CGCAGCAGGAGATTGACAAGACCTTCAAGAAGGTCGCTGAAGGCATTCAA
ACATTCGAGGGTATCTATGAGAAGATCCGGTCAACATCAAATATCACGCA
ACGGGATAAGCTCGAGGAGAACCTGAAACGGGAGATCAAGAAGTTACAAC
GATATCGTGACCAAATCAAGTCATGGGCATCAGGAAACGAGGTCAAGGAT
AAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTGAGACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0030015 | CCR4-NOT core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007282 |
| DBxref | InterPro:IPR007207 |
| DBxref | InterPro:IPR038635 |
| DBxref | InterPro:IPR012270 |
| DBxref | PFAM:PF04065 |
| DBxref | PFAM:PF04153 |
| Product | subunit 3 |
| Product | CCR4-NOT transcription complex |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| KZ851903.1 | supercontig | KZ851903.1:648909..651460 - |
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