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M747DRAFT_254051-T1, M747DRAFT_254051-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_254051-T1
Unique NameM747DRAFT_254051-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:876051..877335-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_254051-T1 ID=M747DRAFT_254051-T1|Name=M747DRAFT_254051-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1285bp|location=Sequence derived from alignment at KZ851903.1:876051..877335- (Aspergillus niger ATCC 13496)
GTCCCAGTCTCTCATTCTTCACTTCAATCCTCTCAACCACAAAGCTCCAT
CAGCCACGGGGATCCCCCGCGCCGCTCTTCACAATGGTAAGCCCTCATGA
TCAACTCAGCCCCCGAACAAATCACCCTTTTAAATCAAGCGACCGCGCCC
TCGAATTTTGTCCAACTCGTCACCCAAATTTCCTCCTCGCCTCTCCCTTC
GCCTTCAACCACACCTAAACCTTAAGCTCAACCAAAAAATCCCTACTAAC
AAAATGACCAGGCGCGTAACAGCGAAAAAGCCCAATCGATGCTCTTCCGT
TTCCGGGCCCAACAAGCCGCGGATCTCGGAATCATCGACATTGGGCGCAC
GCGCCGCCCGAAAGCCATCACCACCGTTGACTCGATCCCGATGTGCGAGA
AATGGCGCGGCCAAGTGCTGAAGGAAATCTCACGCAAGGTGTCTCGGATT
CAGGAGCTCAGTCTAAGCGATTACCAGATCCGGGATCTGAACGATGAGAT
CAACAAGCTTATGAAGGAGAAGTGGACGTGGGAGATGCAGATTCGGAACC
TGGGCGGGCCCAACTACATGCGAGGCTCAGGCCGAGTGTTTGATGATGAT
GGGAGGGAGATACCGGGCGGTGGGAAGGGGTATCGGTATTTTGGACGAGC
GAGGGAGTTACCGGGTGTGAAGGAGATGTTTGAAGCGGCGGCGAGACGGG
GGAGGAGGCCGGCTGAGGAGGAGGATGAAGAAGGTGGGAAGGGGAGAGGA
GGCGAGATTGCGACGAAGAAGGTCGATGCTAATTACTTTGGGTATGGATT
GGATGAGGAGGATGGGGTGCTTTTGGCGTATGAGAAGCAGAAAGAGAAGG
AGGCTGTTGAGAGATTGCGCAGGAAGGATGAGGATGTGGAAGATGGGTGG
GAGCCGTTGCCTGGTGATGCTGGGGATGGCGTCGAGTGGAGGTTGCCTAC
ACTTGACGAGGTCCAGGAGGAGTTGGTTGATCGACGGAGGAGGAGGTTGT
TGGACAAGATCTCATGAGATTGTGCGGTTGTTGGGGCGTCTGTCCTCGTG
ATGCGCTATGCGCTGACTCTGGGGCTCTTTTTTTGATTTTCTTTTCGTCT
ATCATGGGCGTTTAGGGTTTACGATGATTTCTCGTCTCCTTTTGTCTCTC
TCCTACGTCTTTCTGCGGTTCTAACAAGTCTACTATGCATCTGAGGGGAG
GCAAAAGCTCATTGATGATACCAACATGATTCGTTCTTTTGTACAATGGA
AAGGAGATATATCTATATTACATGATTCTTTATTT
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Coding sequence (CDS) from alignment at KZ851903.1:876051..877335-

>M747DRAFT_254051-T1 ID=M747DRAFT_254051-T1|Name=M747DRAFT_254051-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1518bp|location=Sequence derived from alignment at KZ851903.1:876051..877335- (Aspergillus niger ATCC 13496)
GCGCGTAACAGCGAAAAAGCCCAATCGATGCTCTTCCGTTTCCGGGCCCA
ACAAGCCGCGGATCTCGGAATCATCGACATTGGGCGCACGCGCCGCCCGA
AAGCCATCACCACCGTTGACTCGATCCCGATGTGCGAGAAATGGCGCGGC
CAAGTGCTGAAGGAAATCTCACGCAAGGTGTCTCGGATTCAGGAGCTCAG
TCTAAGCGATTACCAGATCCGGGATCTGAACGATGAGATCAACAAGCTTA
TGAAGGAGAAGTGGACGTGGGAGATGCAGATTCGGAACCTGGGCGGGCCC
AACTACATGCGAGGCTCAGGCCGAGTGTTTGATGATGATGGGAGGGAGAT
ACCGGGCGGTGGGAAGGGGTATCGGTATTTTGGACGAGCGAGGGAGTTAC
CGGGTGTGAAGGAGATGTTTGAAGCGGCGGCGAGACGGGGGAGGAGGCCG
GCTGAGGAGGAGGATGAAGAAGGTGGGAAGGGGAGAGGAGGCGAGATTGC
GACGAAGAAGGTCGATGCTAATTACTTTGGGTATGGATTGGATGAGGAGG
ATGGGGTGCTTTTGGCGTATGAGAAGCAGAAAGAGAAGGAGGCTGTTGAG
AGATTGCGCAGGAAGGATGAGGATGTGGAAGATGGGTGGGAGCCGTTGCC
TGGTGATGCTGGGGATGGCGTCGAGTGGAGGTTGCCTACACTTGACGAGG
TCCAGGAGGAGTTGGTTGATCGACGGAGGAGGAGGTTGTTGGACAAGATC
TCATGAATGGCGCGTAACAGCGAAAAAGCCCAATCGATGCTCTTCCGTTT
CCGGGCCCAACAAGCCGCGGATCTCGGAATCATCGACATTGGGCGCACGC
GCCGCCCGAAAGCCATCACCACCGTTGACTCGATCCCGATGTGCGAGAAA
TGGCGCGGCCAAGTGCTGAAGGAAATCTCACGCAAGGTGTCTCGGATTCA
GGAGCTCAGTCTAAGCGATTACCAGATCCGGGATCTGAACGATGAGATCA
ACAAGCTTATGAAGGAGAAGTGGACGTGGGAGATGCAGATTCGGAACCTG
GGCGGGCCCAACTACATGCGAGGCTCAGGCCGAGTGTTTGATGATGATGG
GAGGGAGATACCGGGCGGTGGGAAGGGGTATCGGTATTTTGGACGAGCGA
GGGAGTTACCGGGTGTGAAGGAGATGTTTGAAGCGGCGGCGAGACGGGGG
AGGAGGCCGGCTGAGGAGGAGGATGAAGAAGGTGGGAAGGGGAGAGGAGG
CGAGATTGCGACGAAGAAGGTCGATGCTAATTACTTTGGGTATGGATTGG
ATGAGGAGGATGGGGTGCTTTTGGCGTATGAGAAGCAGAAAGAGAAGGAG
GCTGTTGAGAGATTGCGCAGGAAGGATGAGGATGTGGAAGATGGGTGGGA
GCCGTTGCCTGGTGATGCTGGGGATGGCGTCGAGTGGAGGTTGCCTACAC
TTGACGAGGTCCAGGAGGAGTTGGTTGATCGACGGAGGAGGAGGTTGTTG
GACAAGATCTCATGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000350generation of catalytic spliceosome for second transesterification step
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ISY1M747DRAFT_254051Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254051-T1M747DRAFT_254051-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254051-T1.cdsM747DRAFT_254051-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254051-T1.utr3p1M747DRAFT_254051-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254051-T1.exon2M747DRAFT_254051-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_254051-T1.exon1M747DRAFT_254051-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254051-T1.utr5p1M747DRAFT_254051-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264IOS
DBxrefInterPro:IPR037200
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR009360
DBxrefPFAM:PF06246
ProductNineTeen Complex (NTC) component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:876051..877335 -
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