You are here

Home

M747DRAFT_254204-T1, M747DRAFT_254204-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_254204-T1
Unique NameM747DRAFT_254204-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:1128934..1130517-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_254204-T1 ID=M747DRAFT_254204-T1|Name=M747DRAFT_254204-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1584bp|location=Sequence derived from alignment at KZ851903.1:1128934..1130517- (Aspergillus niger ATCC 13496)
TACCTATTGGAAAGACAGATATTATGTCTATGTCAAAGTTTCTTTCAAAA
ACGGCCGCCCGCGCCGCGTCCACGTCGACTTCGGCGTCGTCGATGACCAA
GGCTGCGGGCGATATCTCCAGCGTCTTCCCCAGTTTGAGACCAGACTACA
AGCCAGAGCCACTGCCCCCGCGGTTCAGGGATCTGAAGCTGAAATACTTT
GAAAAGAATGAAAAGGCTCTGAAGCAAAGCTGGGAGCGACTCCTCCCTAG
CTTGGAGGAGGAAGTGCACAAGATCAAGGCCAAAGGAAGCGATGTAAATT
TCCATGGCATCTTCTATATGCATTGAGTGACACTAACAAAATGCCCAGAT
CATTCCATCGGTGCAATATTCCGACGTGGTCAATGGAACCGTCCCAGACC
ATCTCCTTGCAGAGATCCGTCACAGAGGTTCCGTGGTCATCAGGAACGTG
ATGCCTCGAGAGAAAGCCCTCGACTGGAAGGAGAGGATCAAGGACTATGC
TGCTGCCAATCAAGAGCGCGTGAAGGCCTTTCCTCCCGACTCCCCAGCGG
TCTATGAGCTGTACTGGACTCCATCTCAAGCAGAGGCCCGAGCACATCCG
AACATGCTCGGAACCCAGCGCTTCCTGCAGCGTCTCTGGCACTCGTCCGA
TCCCAACACCCCCATCTCGACCCGGAACCCCTTGACCTACGCAGACCGAC
TCCGTATCAGGCAGCCGGGTGACGCAAAGTTCACTCTTGGCCCTCACATC
GACGGTGGATCATTGGAGCGCTGGGAGGATCCTGAATACTCCCGGGTCTA
TACCAAGATTCTAGAGGGCAAATGGGAAGAGTACGACCCATGGGACGCCA
AGCACCGTGTCTCGGCCAATATGGACTTATACAATGGCGCCGGTTCCTGC
TCCATGCTGAGATTCTTCCAAGGATGGCTGTCCATGTCCAACACAGCTCC
TGGCGAAGGCTCACTGCATGTGTGCCCCATGCTCATCCAGAGTACCGCCT
ACACTATCCTCCGACCTTTCTTCGACCCAGTGTCCTCGCAGCCGGTGCTG
GACAACACATTCCCCGGTGCCGTACCCGGAACGTGTCAAGAGTACAACCC
CGTAACACATCCTCACCTGGATCTCGAAACTACCATGGTGTCCGTCCCCG
AGGTAGAACCGGGTGACTACGTTGCCTGGCACTGTGATTCCTTGCACTCC
GTTGACAAGGAACATCGCGGCAAGGGAGACTCCAGCGTTCTCTACATCCC
TGCCACGCCTATGTGCGAAATGAACGTGGACTACCTGCTCAAGCAGCGCC
AGGCTGCGCTTGCTTACTCTCCGCCCTGGGATTTCCCGGGCGCTGGTGGA
CCCGGTGAGATCGGTTTCCAGGGAGCACTTGACTGGAGCTCTGTTGATGC
AGAAGGCCTGCGCGCCATGGGTATGGGAAGTCAGCCATGGGAGATTACCG
ACGACATGAGCGAGGGAGAGAAGGCGGTTGTCAGAGCTGCCAACAAGACC
TGCTTCGGGCAAGCATGAGTCTCTTGCATAAGATGAGCACACTTGGAGTC
ACAAACTTGTATTTGTATTTGTACATAGAATAGC
back to top

Coding sequence (CDS) from alignment at KZ851903.1:1128934..1130517-

>M747DRAFT_254204-T1 ID=M747DRAFT_254204-T1|Name=M747DRAFT_254204-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2880bp|location=Sequence derived from alignment at KZ851903.1:1128934..1130517- (Aspergillus niger ATCC 13496)
ATCATTCCATCGGTGCAATATTCCGACGTGGTCAATGGAACCGTCCCAGA
CCATCTCCTTGCAGAGATCCGTCACAGAGGTTCCGTGGTCATCAGGAACG
TGATGCCTCGAGAGAAAGCCCTCGACTGGAAGGAGAGGATCAAGGACTAT
GCTGCTGCCAATCAAGAGCGCGTGAAGGCCTTTCCTCCCGACTCCCCAGC
GGTCTATGAGCTGTACTGGACTCCATCTCAAGCAGAGGCCCGAGCACATC
CGAACATGCTCGGAACCCAGCGCTTCCTGCAGCGTCTCTGGCACTCGTCC
GATCCCAACACCCCCATCTCGACCCGGAACCCCTTGACCTACGCAGACCG
ACTCCGTATCAGGCAGCCGGGTGACGCAAAGTTCACTCTTGGCCCTCACA
TCGACGGTGGATCATTGGAGCGCTGGGAGGATCCTGAATACTCCCGGGTC
TATACCAAGATTCTAGAGGGCAAATGGGAAGAGTACGACCCATGGGACGC
CAAGCACCGTGTCTCGGCCAATATGGACTTATACAATGGCGCCGGTTCCT
GCTCCATGCTGAGATTCTTCCAAGGATGGCTGTCCATGTCCAACACAGCT
CCTGGCGAAGGCTCACTGCATGTGTGCCCCATGCTCATCCAGAGTACCGC
CTACACTATCCTCCGACCTTTCTTCGACCCAGTGTCCTCGCAGCCGGTGC
TGGACAACACATTCCCCGGTGCCGTACCCGGAACGTGTCAAGAGTACAAC
CCCGTAACACATCCTCACCTGGATCTCGAAACTACCATGGTGTCCGTCCC
CGAGGTAGAACCGGGTGACTACGTTGCCTGGCACTGTGATTCCTTGCACT
CCGTTGACAAGGAACATCGCGGCAAGGGAGACTCCAGCGTTCTCTACATC
CCTGCCACGCCTATGTGCGAAATGAACGTGGACTACCTGCTCAAGCAGCG
CCAGGCTGCGCTTGCTTACTCTCCGCCCTGGGATTTCCCGGGCGCTGGTG
GACCCGGTGAGATCGGTTTCCAGGGAGCACTTGACTGGAGCTCTGTTGAT
GCAGAAGGCCTGCGCGCCATGGGTATGGGAAGTCAGCCATGGGAGATTAC
CGACGACATGAGCGAGGGAGAGAAGGCGGTTGTCAGAGCTGCCAACAAGA
CCTGCTTCGGGCAAGCATGAATGTCTATGTCAAAGTTTCTTTCAAAAACG
GCCGCCCGCGCCGCGTCCACGTCGACTTCGGCGTCGTCGATGACCAAGGC
TGCGGGCGATATCTCCAGCGTCTTCCCCAGTTTGAGACCAGACTACAAGC
CAGAGCCACTGCCCCCGCGGTTCAGGGATCTGAAGCTGAAATACTTTGAA
AAGAATGAAAAGGCTCTGAAGCAAAGCTGGGAGCGACTCCTCCCTAGCTT
GGAGGAGGAAGTGCACAAGATCAAGGCCAAAGGAAGCGATATCATTCCAT
CGGTGCAATATTCCGACGTGGTCAATGGAACCGTCCCAGACCATCTCCTT
GCAGAGATCCGTCACAGAGGTTCCGTGGTCATCAGGAACGTGATGCCTCG
AGAGAAAGCCCTCGACTGGAAGGAGAGGATCAAGGACTATGCTGCTGCCA
ATCAAGAGCGCGTGAAGGCCTTTCCTCCCGACTCCCCAGCGGTCTATGAG
CTGTACTGGACTCCATCTCAAGCAGAGGCCCGAGCACATCCGAACATGCT
CGGAACCCAGCGCTTCCTGCAGCGTCTCTGGCACTCGTCCGATCCCAACA
CCCCCATCTCGACCCGGAACCCCTTGACCTACGCAGACCGACTCCGTATC
AGGCAGCCGGGTGACGCAAAGTTCACTCTTGGCCCTCACATCGACGGTGG
ATCATTGGAGCGCTGGGAGGATCCTGAATACTCCCGGGTCTATACCAAGA
TTCTAGAGGGCAAATGGGAAGAGTACGACCCATGGGACGCCAAGCACCGT
GTCTCGGCCAATATGGACTTATACAATGGCGCCGGTTCCTGCTCCATGCT
GAGATTCTTCCAAGGATGGCTGTCCATGTCCAACACAGCTCCTGGCGAAG
GCTCACTGCATGTGTGCCCCATGCTCATCCAGAGTACCGCCTACACTATC
CTCCGACCTTTCTTCGACCCAGTGTCCTCGCAGCCGGTGCTGGACAACAC
ATTCCCCGGTGCCGTACCCGGAACGTGTCAAGAGTACAACCCCGTAACAC
ATCCTCACCTGGATCTCGAAACTACCATGGTGTCCGTCCCCGAGGTAGAA
CCGGGTGACTACGTTGCCTGGCACTGTGATTCCTTGCACTCCGTTGACAA
GGAACATCGCGGCAAGGGAGACTCCAGCGTTCTCTACATCCCTGCCACGC
CTATGTGCGAAATGAACGTGGACTACCTGCTCAAGCAGCGCCAGGCTGCG
CTTGCTTACTCTCCGCCCTGGGATTTCCCGGGCGCTGGTGGACCCGGTGA
GATCGGTTTCCAGGGAGCACTTGACTGGAGCTCTGTTGATGCAGAAGGCC
TGCGCGCCATGGGTATGGGAAGTCAGCCATGGGAGATTACCGACGACATG
AGCGAGGGAGAGAAGGCGGTTGTCAGAGCTGCCAACAAGACCTGCTTCGG
GCAAGCATGAATGTCTATGTCAAAGTTTCTTTCAAAAACGGCCGCCCGCG
CCGCGTCCACGTCGACTTCGGCGTCGTCGATGACCAAGGCTGCGGGCGAT
ATCTCCAGCGTCTTCCCCAGTTTGAGACCAGACTACAAGCCAGAGCCACT
GCCCCCGCGGTTCAGGGATCTGAAGCTGAAATACTTTGAAAAGAATGAAA
AGGCTCTGAAGCAAAGCTGGGAGCGACTCCTCCCTAGCTTGGAGGAGGAA
GTGCACAAGATCAAGGCCAAAGGAAGCGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_254204M747DRAFT_254204Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254204-T1M747DRAFT_254204-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254204-T1.cdsM747DRAFT_254204-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254204-T1.utr3p1M747DRAFT_254204-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254204-T1.exon2M747DRAFT_254204-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_254204-T1.exon1M747DRAFT_254204-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254204-T1.utr5p1M747DRAFT_254204-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027443
DBxrefInterPro:IPR010856
DBxrefPFAM:PF07350
ProductDUF1479-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:1128934..1130517 -
Powered by Drupal