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M747DRAFT_254488-T1, M747DRAFT_254488-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_254488-T1
Unique NameM747DRAFT_254488-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:403711..405135+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_254488-T1 ID=M747DRAFT_254488-T1|Name=M747DRAFT_254488-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1425bp|location=Sequence derived from alignment at KZ851904.1:403711..405135+ (Aspergillus niger ATCC 13496)
CCCCCCGCCCACTAGACCAGTTCCGCGGAAGCTATCATTGCCGCTTGAGC
TTTCATTGCGACCCAGCGACGTGGTAAAAAAAAAAAAAAGAGACGCGACT
TTCTCTACACCTATAATCATAATGGCTACGGAAGAGAACGAGATCAAGGA
TGAGCGCCTGCAACACCAGGAGGAGGCCGGTGATGATGAGGTACGTTTTG
ACTGCTTGCGCTGAAAACCCAAAGCTTGATGCTTTCTTTTGCTTGTTTCT
TGGCTTGCTTCTATTTGACTTGGCGATTTGTCTTTCACTGAATCTAGCTA
ACGTGACCTTCTTTTTTCATGACTTATAGGAGGAGATTGCGGCGATGAAG
AAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCA
AGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGA
TCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCC
GAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCAC
TATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGGTATGTTGCAGCGC
ATTCATTTGACAGGCTGGGGGGCATCATATGCTGATATGATTTACAGATA
CGCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCT
TGAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGTAGATCGCATGATA
GAGGCCATTGATCGACTGAATGATACTAATGCTCGATGCTTTACAGGTCG
TTCCAAAGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTGGACGAGGT
GGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCCGTGG
AGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCCTACT
AAGGGCCTGAACTGCTTGGAGGCGAGGCATGCGAGCGAAGTTAGGTGCAG
ACTCGACGCGGCATCGCGATGGAGACATCCGGTGCGAAGCGCAGGTCGGG
AACTGAAATGCACACATCTCTCTTGATCTAGTGAGAATCCTCTGGAGTTT
ATGGACTGGGATGTACTTTGTATGATAACCATCCGGCAATCTCGGACTAC
GCCAGATGGGTGGAGCACTGAAGTCGCTTGTTTCTTGTTGTGATATCATA
AAGCCTACAGAGAATTTGCTTTGCGACAGGAACCGTCAAGAAAAGAACTA
GTCAAGAGGACGGGACATTTGGGAATTACGTCTTGGAACAGACAGCATAA
TGGAGCTGCTGTGAGTTAGTTCAGCACAACAAAAGATGTGGTCTATAAAA
ATATGCAGTAAAGGCAGCAAGGCACTGGAATTAGCCATCCCAATATTATT
AGTGTAAGTAGGGAGTAAGGACGGG
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Coding sequence (CDS) from alignment at KZ851904.1:403711..405135+

>M747DRAFT_254488-T1 ID=M747DRAFT_254488-T1|Name=M747DRAFT_254488-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2280bp|location=Sequence derived from alignment at KZ851904.1:403711..405135+ (Aspergillus niger ATCC 13496)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAG
CCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTT
GATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCG
GAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTC
AGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTG
GACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGTCGTTCCAAAGCGTACCAACCTGCCGGGCATGAGC
CGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGG
TGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTC
GCGGCTATGCGCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGAT
GAGCGCCTGCAACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGC
GGCGATGAAGAAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTAC
GCGAGATGCAAGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGAC
AAAGAGGAGATCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGG
TGCCTCTCCCGAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAA
ACCGTGTCACTATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATAC
GCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTT
GAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCAAAGCGTA
CCAACCTGCCGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGT
GGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGG
TGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCCTACTAAATGGCTACGG
AAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGAGGAGGCCGGT
GATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGA
ATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAAT
CGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTC
GTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTT
TCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCA
CCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGAACCCAGTTTA
GTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCGGCCGGAACCT
GAAGGTCGTTCCAAAGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTG
GACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCG
CCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGC
GCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGC
AACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAG
AAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCA
AGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGA
TCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCC
GAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCAC
TATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAG
AATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGT
GTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCAAAGCGTACCAACCTGCC
GGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGG
GGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGT
GGCCGGGGTCGCGGCTATGCGCCCTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_254488M747DRAFT_254488Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254488-T1M747DRAFT_254488-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254488-T1.utr5p1M747DRAFT_254488-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254488-T1.exon1M747DRAFT_254488-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_254488-T1.exon2M747DRAFT_254488-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_254488-T1.exon3M747DRAFT_254488-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_254488-T1.exon4M747DRAFT_254488-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254488-T1.cdsM747DRAFT_254488-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_254488-T1.utr3p1M747DRAFT_254488-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:403711..405135 +
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