You are here

Home

M747DRAFT_258566-T1, M747DRAFT_258566-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_258566-T1
Unique NameM747DRAFT_258566-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:96038..97056+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_258566-T1 ID=M747DRAFT_258566-T1|Name=M747DRAFT_258566-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1019bp|location=Sequence derived from alignment at KZ851912.1:96038..97056+ (Aspergillus niger ATCC 13496)
TGCACGCGCAACGCATTACTTTTCTCTCCGAACAGGGAGCTACTTCTCAA
TCAAGGTCGGCCTTTATGTGCAGCTTTGGCTGCCTCCTTAGTTCTAGCAA
CTTTTGGCTAACGACTTGCAGATTTGATCAACTTCTAGCTCCAGCGGCCC
CAGCCCCTCCAAGCCCCCTCGCCGATCGCCACACTTGATCGCAGGTGACA
GTAATTGTATTAGCAAGATGAGCGAGCCTCTCCCATCGTCTTTCGAAGAA
CATCCGTACGTATTCGGGCTCTCCTTGCTAATACAATTCCTACACGGGAA
GTTCAACTAATCCTAACATCTTTGTTCTTCCAGTCAGTTCCAAGAGGAGA
CTTCGCTCCAAAAGTTCCGCAGACGTCTCAAGGAAGAGCCTCTGATCCCG
CTAGGTAGGCAGGCCATTGAAGCTCGGACGCCACATATCTTGAACTTAGC
TAACTTACTATAACGCCAGGATGTGCTGCCACTTCCTACGCACTTTACCG
GGCCTACCGGTCGATGAAGGCTGGCGACTCCGTCGAGATGAATAAGATGT
TCCGTGCTCGTATCTACGCCCAGTTTTTCACCCTTATCGCCGTGGTCGCC
GGAGGCATGTATTACGGTAGCGAGCGGAAGCAACGAAGGGAGTTCGAGCA
GATGGTGGAGGCACGCAAGAGCCAGGAAAAGCGGGACGCCTGGCTGCGGG
AGTTGGAGATTCGTGACAAGGAAGACAGGGGCTGGCGGGAGCGTCACGCG
GCTATTGAAGCCGCGGCGAACGAGGCCGCGAATGCTAAGAAATCGTTCCC
TGAGCAGGATGCTGCTCGCTCTGCTATTGAGCCTTCCGAACAGAAGTCAA
TCGGGGTACTAATTGCTGTGAAGGAGTTGTTGTCGAGGCAGTGAGGTCGG
CAAAAATAAGTGGTATTGAGTTTCTTAGTTGATTCTCACGTTGGTCTGGG
TATCTATGATATTGTACATATACGCATTCGATTTTTGTTAAAAAATATCA
CTCTCCATCTCTTAACCCT
back to top

Coding sequence (CDS) from alignment at KZ851912.1:96038..97056+

>M747DRAFT_258566-T1 ID=M747DRAFT_258566-T1|Name=M747DRAFT_258566-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1602bp|location=Sequence derived from alignment at KZ851912.1:96038..97056+ (Aspergillus niger ATCC 13496)
ATGAGCGAGCCTCTCCCATCGTCTTTCGAAGAACATCCTCAGTTCCAAGA
GGAGACTTCGCTCCAAAAGTTCCGCAGACGTCTCAAGGAAGAGCCTCTGA
TCCCGCTAGGATGTGCTGCCACTTCCTACGCACTTTACCGGGCCTACCGG
TCGATGAAGGCTGGCGACTCCGTCGAGATGAATAAGATGTTCCGTGCTCG
TATCTACGCCCAGTTTTTCACCCTTATCGCCGTGGTCGCCGGAGGCATGT
ATTACGGTAGCGAGCGGAAGCAACGAAGGGAGTTCGAGCAGATGGTGGAG
GCACGCAAGAGCCAGGAAAAGCGGGACGCCTGGCTGCGGGAGTTGGAGAT
TCGTGACAAGGAAGACAGGGGCTGGCGGGAGCGTCACGCGGCTATTGAAG
CCGCGGCGAACGAGGCCGCGAATGCTAAGAAATCGTTCCCTGAGCAGGAT
GCTGCTCGCTCTGCTATTGAGCCTTCCGAACAGAAGTCAATCGGGGTACT
AATTGCTGTGAAGGAGTTGTTGTCGAGGCAGTGAATGAGCGAGCCTCTCC
CATCGTCTTTCGAAGAACATCCTCAGTTCCAAGAGGAGACTTCGCTCCAA
AAGTTCCGCAGACGTCTCAAGGAAGAGCCTCTGATCCCGCTAGGATGTGC
TGCCACTTCCTACGCACTTTACCGGGCCTACCGGTCGATGAAGGCTGGCG
ACTCCGTCGAGATGAATAAGATGTTCCGTGCTCGTATCTACGCCCAGTTT
TTCACCCTTATCGCCGTGGTCGCCGGAGGCATGTATTACGGTAGCGAGCG
GAAGCAACGAAGGGAGTTCGAGCAGATGGTGGAGGCACGCAAGAGCCAGG
AAAAGCGGGACGCCTGGCTGCGGGAGTTGGAGATTCGTGACAAGGAAGAC
AGGGGCTGGCGGGAGCGTCACGCGGCTATTGAAGCCGCGGCGAACGAGGC
CGCGAATGCTAAGAAATCGTTCCCTGAGCAGGATGCTGCTCGCTCTGCTA
TTGAGCCTTCCGAACAGAAGTCAATCGGGGTACTAATTGCTGTGAAGGAG
TTGTTGTCGAGGCAGTGAATGAGCGAGCCTCTCCCATCGTCTTTCGAAGA
ACATCCTCAGTTCCAAGAGGAGACTTCGCTCCAAAAGTTCCGCAGACGTC
TCAAGGAAGAGCCTCTGATCCCGCTAGGATGTGCTGCCACTTCCTACGCA
CTTTACCGGGCCTACCGGTCGATGAAGGCTGGCGACTCCGTCGAGATGAA
TAAGATGTTCCGTGCTCGTATCTACGCCCAGTTTTTCACCCTTATCGCCG
TGGTCGCCGGAGGCATGTATTACGGTAGCGAGCGGAAGCAACGAAGGGAG
TTCGAGCAGATGGTGGAGGCACGCAAGAGCCAGGAAAAGCGGGACGCCTG
GCTGCGGGAGTTGGAGATTCGTGACAAGGAAGACAGGGGCTGGCGGGAGC
GTCACGCGGCTATTGAAGCCGCGGCGAACGAGGCCGCGAATGCTAAGAAA
TCGTTCCCTGAGCAGGATGCTGCTCGCTCTGCTATTGAGCCTTCCGAACA
GAAGTCAATCGGGGTACTAATTGCTGTGAAGGAGTTGTTGTCGAGGCAGT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RCF1M747DRAFT_258566Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258566-T1M747DRAFT_258566-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258566-T1.utr5p1M747DRAFT_258566-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_258566-T1.utr5p2M747DRAFT_258566-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258566-T1.exon1M747DRAFT_258566-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_258566-T1.exon2M747DRAFT_258566-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_258566-T1.exon3M747DRAFT_258566-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_258566-T1.exon4M747DRAFT_258566-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258566-T1.cdsM747DRAFT_258566-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258566-T1.utr3p1M747DRAFT_258566-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264J8E
DBxrefInterPro:IPR007667
DBxrefPFAM:PF04588
Product mitochondrial
ProductRespiratory supercomplex factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:96038..97056 +
Powered by Drupal