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M747DRAFT_258658-T1, M747DRAFT_258658-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_258658-T1
Unique NameM747DRAFT_258658-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:227808..228592+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_258658-T1 ID=M747DRAFT_258658-T1|Name=M747DRAFT_258658-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=785bp|location=Sequence derived from alignment at KZ851912.1:227808..228592+ (Aspergillus niger ATCC 13496)
TGAACAAGCCAGTCCGTAAAGATGGTATGTGTTAATGTTATTTCGATCTG
AGAATACCCTCAATGGGCGGCTAACAAGCAATCAGGTTTTCATTTTGGGC
GTGAACTTCCCCGAGCGAAACCTCGTCAAGGCAAGCAACTCCGAACTTCC
ATTTTACCTTCAACGCCTGGTCTGACTGAAATCAGAAATCGCTCGAGTCC
TTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTCCTTGCCCGCTTCCA
TATCCACCCAACATGCAAGGTTGGCGACTTGGCGAACAAGCAGGTCCTCG
ACATCACGGCCGCCTTGTCCGACATGAAGATTGAGAACGATCTCCGCAGA
CAGTACCTCGATAACATCAAGCGTTTGAAGGAGACAGGAACCTACCGTGG
TCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACAGCGGACGAGGAGCC
AGGTAGGTTTATTCCTATATCCAGTTTCCCCCAATATGATACTAGGGAAT
GTTGAAGCACTTCGCTGGTGGACGTGGTCGTGGGGTATTGCACAAAAGAA
GATTTATACTAACGTAATCACCAGATCAAAACTGCTGTCAAGCTCAACCG
TATGGAGAGAAGACTGTGAGGTTAACATGATTGATTCTATTATTGACCCC
AGTGGTCCTGCGGCTTCGTTTCAATTGGGGCATGGAATGGCGTTATAAAT
TCGCTTTTGTAAATTAGTGTTCTGGCTTGACCTTCTCCATCCTGGGGATG
TATTTTATGTAGACAATGAAATATTGAAATCAAGG
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Coding sequence (CDS) from alignment at KZ851912.1:227808..228592+

>M747DRAFT_258658-T1 ID=M747DRAFT_258658-T1|Name=M747DRAFT_258658-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1440bp|location=Sequence derived from alignment at KZ851912.1:227808..228592+ (Aspergillus niger ATCC 13496)
ATGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAACCTCGTCAAGAA
ATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTCC
TTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGGCGAAC
AAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATTGAGAA
CGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGAGACAG
GAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACAG
CGGACGAGGAGCCAGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAG
AAGACTGTGAATGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAACC
TCGTCAAGAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCG
ACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGA
CTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGA
AGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTG
AAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGT
TCGGGGACAGCGGACGAGGAGCCAGATCAAAACTGCTGTCAAGCTCAACC
GTATGGAGAGAAGACTGTGAATGGTTTTCATTTTGGGCGTGAACTTCCCC
GAGCGAAACCTCGTCAAGAAATCGCTCGAGTCCTTCTTCGGCATCGGTAA
CTTGACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCA
AGGTTGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTG
TCCGACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACAT
CAAGCGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCG
GCTTGCCCGTTCGGGGACAGCGGACGAGGAGCCAGATCAAAACTGCTGTC
AAGCTCAACCGTATGGAGAGAAGACTGTGAATGGTTTTCATTTTGGGCGT
GAACTTCCCCGAGCGAAACCTCGTCAAGAAATCGCTCGAGTCCTTCTTCG
GCATCGGTAACTTGACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCAC
CCAACATGCAAGGTTGGCGACTTGGCGAACAAGCAGGTCCTCGACATCAC
GGCCGCCTTGTCCGACATGAAGATTGAGAACGATCTCCGCAGACAGTACC
TCGATAACATCAAGCGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGT
CATGCGCTCGGCTTGCCCGTTCGGGGACAGCGGACGAGGAGCCAGATCAA
AACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_258658M747DRAFT_258658Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258658-T1M747DRAFT_258658-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258658-T1.utr5p1M747DRAFT_258658-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258658-T1.exon1M747DRAFT_258658-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_258658-T1.exon2M747DRAFT_258658-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_258658-T1.exon3M747DRAFT_258658-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_258658-T1.exon4M747DRAFT_258658-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258658-T1.cdsM747DRAFT_258658-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258658-T1.utr3p1M747DRAFT_258658-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR018269
DBxrefInterPro:IPR001892
DBxrefInterPro:IPR027437
DBxrefPFAM:PF00416
Product40S ribosomal protein S13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:227808..228592 +
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