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M747DRAFT_258694-T1, M747DRAFT_258694-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_258694-T1
Unique NameM747DRAFT_258694-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:264940..267281+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_258694-T1 ID=M747DRAFT_258694-T1|Name=M747DRAFT_258694-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2342bp|location=Sequence derived from alignment at KZ851912.1:264940..267281+ (Aspergillus niger ATCC 13496)
CGAGTATCTCCATCGCATCGGCCAATTTGCCAGAGCCTTCTTCCCCTCCA
GACCCTCTTTTACCGCCCGTTTTCCACTCTCAGAGCTTCGGTCAATTACA
TTGGGTGATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCA
AGAGAGAAGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGAT
GGAGACGGAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCC
GTCAGTTTCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAG
GGATATCGGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCC
GGAGACCGGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGA
TGAAGTGGAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGA
TCGCAGAGAGGCTGAAAGAGGATGTTGTAAGTACAAATCCTCCCATCCGG
CTCCTGTTCGGCTGGTCAGGCGTTTTACATGCAGAGCTGACGAGAGCTGC
AGGATGAATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCC
TTCTCGACGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTAC
GTCAATTGCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGA
CCTTGATTAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACA
AATGGAGAGGAGTCCGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAA
GCAGGTCAGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAG
AGCATGGACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGA
AAATTTGTAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGC
GGAGACTCTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCA
GTGGTCTTGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAG
CTCTTCTCTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTAC
AGCCGGCCATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTA
CGTCCGTCGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGC
GATCGCACGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTT
CCGTGGTGGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCG
TATCGCCGTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCC
ATCTCTCTCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCA
CGCACACGGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAG
TCAATCAAGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCC
CGCTGGATCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAG
CGGCAGCTGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAA
AGACCATTGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTA
ACCCCCGACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACAC
ACCGACGAGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGA
CCGAGGAGGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCT
GTTTTCGAGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGA
ACCCAAGTCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAAC
ATGGGCTCTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGG
TTCAAATGCTTCTCCAACAACTTCCATGACGGCCCCACCGCGGACGGTCG
GAACGGTGCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAAT
GATCGATCCTGGCATCGATCGATTAGTATCCGAATCGAGGCGCTGACTGA
CTAATTGATTTTGGTGGCGGCGCTGGACGGCTGTATGCAATGTAGTGGAA
ACATCATGGCGTCTGTGCATCCTACATTTCTTTTCTATCTACTCTATGCA
TGTATCTTTATTCCCGGGCCGGTGGTCTCTGCATATTGCTTTCAAAAGTT
CGCATTAGAAGAGGTACTTTTCTGTTCCACTATCTCTCTAATCCCCGTGA
TTTAGCCGGTTTCTTGTACGATGTATATACTTTGAACATGAG
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Coding sequence (CDS) from alignment at KZ851912.1:264940..267281+

>M747DRAFT_258694-T1 ID=M747DRAFT_258694-T1|Name=M747DRAFT_258694-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3738bp|location=Sequence derived from alignment at KZ851912.1:264940..267281+ (Aspergillus niger ATCC 13496)
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGATATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGATGAATTCAAAGGACGCGTTTATCGTCAGA
TTGCCTCCGATTTGGCCTTCTCGACGGCCTCCCATACCTTCTTCCGGGCA
GATACGCAGTCAACTACGTCAATTGCAGTCCATGCGCCGTATGTTTACAC
CGTTTCGAAGGACAAGACCTTGATTAAATGGGAACTCGCCACACCCACCT
CCACGATTTCTACAACAAATGGAGAGGAGTCCGAACGCCCTCCTCGCCCC
CAGCGGAAGAAGCCAAAGCAGGTCAGGTTTGTGCGGGGCTTGCGAAAGGT
TGCGGAGACGGGAGAAGAGCATGGACATACCAAGAACATCTTGTCCGTCG
CAGTGTCGCCGTCCGGAAAATTTGTAGCCACGGGAGGAGAAGACCGGAAA
CTCATCGTCTGGGACGCGGAGACTCTTACCCCCCTGAAGACCTTCACACA
ACATCGCGACGCTGTCAGTGGTCTTGCCTTCGCTCGTCATATCTCTACCA
TGAGTTCTGGAGAGCAGCTCTTCTCTGGCTCTTATGACCGGACCATCAAG
ACCTGGTCTCTGAGTACAGCCGGCCATGCCTATGTTGAAACACTCTTCGG
ACATCAAGATCATGTTACGTCCGTCGCCGCCATGGCCATCGATCAGTGTG
TCAGTGTGGGAGCGCGCGATCGCACGGCCAGGTTGTGGAAGGTTATCGAG
GAATCCCAACTGATCTTCCGTGGTGGTTCTAAGAGCGCCTCCTATCAAGA
GAACAACATTGACTGCGTATCGCCGTTACCTCCTAACCACTTCGTTACTG
GATCGGACTCAGGTTCCATCTCTCTCTGGTCCATTCACAAGAAGAAGCCG
CTTCACACGATCCCTCACGCACACGGCCTCGACCCCTTACCTCCACTGGA
CGAACTCTCCTCTGAAGTCAATCAAGAAACCGCAGCACACAATTCCCGTC
ACCTCCGGCGCATGCCCCGCTGGATCACCGCTTTGACTACGCTTCCGGGC
ACAGACGTCGTACTTAGCGGCAGCTGGGATGGCTTCATCCGGGCATGGAA
GATCTCGGAAGACAAAAAGACCATTGTTCCTCTGGGCCCTATCGGAGCAG
GATCCAGCATTCCGCTAACCCCCGACACCCCATCCGAGCAATTAAAGCAG
ACCCTTGCCTTCGACACACCGACGAGCCCGGATCACATGGCAGTTGATGG
TGCGCCGGCCCAGCAGACCGAGGAGGAAGCAGAACCGCTGATCAAGGGTG
TGATCAACGATATTGCTGTTTTCGAGCGTCGCGCAGAAACCGCCAAACCA
GGCCAAGCGCCAGCGGAACCCAAGTCCAAGTCCAAGTCCAACACCAAGCC
GTCTGCGCCCGAGCAACATGGGCTCTGCATCGTAGCCGCTGTTGGCAAGG
AACATCGGCTAGCAAGGTTCAAATGCTTCTCCAACAACTTCCATGACGGC
CCCACCGCGGACGGTCGGAACGGTGCCGTCGTGTTCGAAGTACCATTCAT
CTCCCAAAAATCGAAATGAATGTCGTCTTTTTTCACCCTGCCCGCTTCGC
AGCGGAAGCGCAAGAGAGAAGACCGCGCTGGCGCCCCCGCGTCTAAGAAA
CGAGGTGTCGATGGAGACGGAGATGCGGGCGCAAAGAGTGGCAAAAAGAA
GACTAGGGAGCCGTCAGTTTCGGGAAGCGACATTGATGAGGATGAGCTCA
GTGGTGCCTCAGGGATATCGGAGGAGGAAAGTGGCTCAGAATCCGACGAA
GGAGAGACAGCCGGAGACCGGAGATTGAAGCTTGCGGAGCGGTACCTGGA
AAATGTCCGGGATGAAGTGGAGGACTTTGGCTTTGACGCGGCCGAGATTG
ATCGTGACTTGATCGCAGAGAGGCTGAAAGAGGATGTTGATGAATTCAAA
GGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTTCTCGACGGCCTC
CCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGTCAATTGCAGTCC
ATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACCTTGATTAAATGG
GAACTCGCCACACCCACCTCCACGATTTCTACAACAAATGGAGAGGAGTC
CGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGCAGGTCAGGTTTG
TGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAGCATGGACATACC
AAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAAATTTGTAGCCAC
GGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGGAGACTCTTACCC
CCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGTGGTCTTGCCTTC
GCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCTCTTCTCTGGCTC
TTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAGCCGGCCATGCCT
ATGTTGAAACACTCTTCGGACATCAAGATCATGTTACGTCCGTCGCCGCC
ATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGATCGCACGGCCAG
GTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCCGTGGTGGTTCTA
AGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTATCGCCGTTACCT
CCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCATCTCTCTCTGGTC
CATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACGCACACGGCCTCG
ACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTCAATCAAGAAACC
GCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCGCTGGATCACCGC
TTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCGGCAGCTGGGATG
GCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAGACCATTGTTCCT
CTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAACCCCCGACACCCC
ATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACACCGACGAGCCCGG
ATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACCGAGGAGGAAGCA
GAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGTTTTCGAGCGTCG
CGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAACCCAAGTCCAAGT
CCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACATGGGCTCTGCATC
GTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTTCAAATGCTTCTC
CAACAACTTCCATGACGGCCCCACCGCGGACGGTCGGAACGGTGCCGTCG
TGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_258694M747DRAFT_258694Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258694-T1.utr5p1M747DRAFT_258694-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258694-T1.exon1M747DRAFT_258694-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_258694-T1.exon2M747DRAFT_258694-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258694-T1.cdsM747DRAFT_258694-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258694-T1.utr3p1M747DRAFT_258694-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258694-T1M747DRAFT_258694-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Productsmall nucleolar ribonucleo protein complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:264940..267281 +
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