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M747DRAFT_258729-T1, M747DRAFT_258729-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_258729-T1
Unique NameM747DRAFT_258729-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851912.1:334217..335478-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_258729-T1 ID=M747DRAFT_258729-T1|Name=M747DRAFT_258729-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1262bp|location=Sequence derived from alignment at KZ851912.1:334217..335478- (Aspergillus niger ATCC 13496)
GGACCTTCCCTGCCCATGATCTTGTCTCCCGAACACCTGGGTCCAGGCCA
GACGTCGTCATATCATTGAGTTTGGTCGATTAATCATCCCGCCGGCCTTT
TGCTTCATCCCTCTGTCGGATTTGTTGCTCTCCGGATCTGTTCTTTCCTC
CCCGCTGATTCTGCACGGCCTTCTGGCTGCCGCGTCCAGCTCACGATGGG
CAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGCACAGC
AATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAATGCAC
GATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGACCTCAACAACACCA
ATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCGCAGG
CCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAGCCGC
ATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCAAGGA
ATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTTGTCG
AAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCAGCAG
CGGGGAAAGCACTTGGATGGTGAGAGGTATGTCTAGTGTCCTCGATCTGT
AGGCGGGAGGATCTCGCCAATAATTAGATATTTGATGCTAACTCCCCCGG
TTTCCGGTGAAATAGCGTTGTTCAGCGACAGCTTTGGCTCCTTAATAATG
TCCCCGATATGACCAAGAGCGCCGCTTACGATATTGCACGCCGCGAGTTC
TACCGCCTCCGTCTACAGGAAGACATTGAACGACGTGTTGCTGCTGAGGA
AGCCGAAGCTACTGGTGCTGTGTTCGGACCGACACGTCTACAGATCGGTA
TGGACCTCGAGAACAAGGAGTATGAGCGTTGGAAGGAATGGGCCAAGTTG
CAGGCCCAGCTTTCGGACCAGAGAATGGCTGCGTTCCTTGGGGCTCCGGA
AGTCCAAGCTGCTGAGGAGCAAGAGACGAGCTTGGATGATGACGCCACGG
AAAAGGTTGCGGTAGCAGCCTGAAGGCGGGAGTTGTTACTTTTTGAGGGT
TTTAGTATTGTCAACCCCCGGATGAGGCGGGTTTTGCCAGACTCTCTAAT
GGCTTATGTACACTACTGGACTGTCGATATGTTTTCTTTTCTTCTCGAGT
CGCTCTGTTTTACTTTTATGCTTTTCTCTATATCCTTTCTTGCTGTGAAT
AAGAGTTTTGGG
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Coding sequence (CDS) from alignment at KZ851912.1:334217..335478-

>M747DRAFT_258729-T1 ID=M747DRAFT_258729-T1|Name=M747DRAFT_258729-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1578bp|location=Sequence derived from alignment at KZ851912.1:334217..335478- (Aspergillus niger ATCC 13496)
CGTTGTTCAGCGACAGCTTTGGCTCCTTAATAATGTCCCCGATATGACCA
AGAGCGCCGCTTACGATATTGCACGCCGCGAGTTCTACCGCCTCCGTCTA
CAGGAAGACATTGAACGACGTGTTGCTGCTGAGGAAGCCGAAGCTACTGG
TGCTGTGTTCGGACCGACACGTCTACAGATCGGTATGGACCTCGAGAACA
AGGAGTATGAGCGTTGGAAGGAATGGGCCAAGTTGCAGGCCCAGCTTTCG
GACCAGAGAATGGCTGCGTTCCTTGGGGCTCCGGAAGTCCAAGCTGCTGA
GGAGCAAGAGACGAGCTTGGATGATGACGCCACGGAAAAGGTTGCGGTAG
CAGCCTGAATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATC
GCTGTGGCACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCT
TGATATAATGCACGATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGAC
CTCAACAACACCAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCA
TCGAGGCCGCAGGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAA
GAAGGCAAGCCGCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATC
AACTGCGCAAGGAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCC
CGTGTGCTTGTCGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAG
CCGGCTCCAGCAGCGGGGAAAGCACTTGGATGGTGAGAGCGTTGTTCAGC
GACAGCTTTGGCTCCTTAATAATGTCCCCGATATGACCAAGAGCGCCGCT
TACGATATTGCACGCCGCGAGTTCTACCGCCTCCGTCTACAGGAAGACAT
TGAACGACGTGTTGCTGCTGAGGAAGCCGAAGCTACTGGTGCTGTGTTCG
GACCGACACGTCTACAGATCGGTATGGACCTCGAGAACAAGGAGTATGAG
CGTTGGAAGGAATGGGCCAAGTTGCAGGCCCAGCTTTCGGACCAGAGAAT
GGCTGCGTTCCTTGGGGCTCCGGAAGTCCAAGCTGCTGAGGAGCAAGAGA
CGAGCTTGGATGATGACGCCACGGAAAAGGTTGCGGTAGCAGCCTGAATG
GGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGCACA
GCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAATGC
ACGATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGACCTCAACAACAC
CAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCGCA
GGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAGCC
GCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCAAG
GAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTTGT
CGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCAGC
AGCGGGGAAAGCACTTGGATGGTGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005763mitochondrial small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM25M747DRAFT_258729Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258729-T1M747DRAFT_258729-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258729-T1.cdsM747DRAFT_258729-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258729-T1.utr3p1M747DRAFT_258729-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258729-T1.exon2M747DRAFT_258729-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_258729-T1.exon1M747DRAFT_258729-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_258729-T1.utr5p1M747DRAFT_258729-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264X41
DBxrefInterPro:IPR016939
DBxrefPFAM:PF13741
Productmitochondrial ribosomal small subunit component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851912.1supercontigKZ851912.1:334217..335478 -
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