You are here

Home

M747DRAFT_261527-T1, M747DRAFT_261527-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_261527-T1
Unique NameM747DRAFT_261527-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851919.1:179581..181715+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_261527-T1 ID=M747DRAFT_261527-T1|Name=M747DRAFT_261527-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2135bp|location=Sequence derived from alignment at KZ851919.1:179581..181715+ (Aspergillus niger ATCC 13496)
CATCAGGTGGTTCGCGGCGGACCACTTTGAGCATTGCCAGGTACTTTAGC
CCCCAGTGCCTAGTCGGAACGCATTATATGAATGGGCTGGTGCTGTCTAG
CATTTGACGCAACCGTCTGAAGCTTCTCCAGAGCGCAGCCGCGTTTCAAG
TCCGCGATCTCATTACTGCATCGCGGGGTCAACCAAGTGATCGAGCAGGC
GCATTATACATAATCAGCTCCCCTAGAGTCCAGCAATTTCAGAAAATATG
CCATCCTCGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCTATG
CGGTCCCGGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGTACC
CGAAGAGTCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCCATC
GACTTTTGCAAGCGGTCAGGCATTACAGGTACGTTGTTGGTGACTAAAAC
ATGTGTCCTTCAACCCTAGACTGGCAGATCACCTGTCCTGGACTAACGTC
ATATCTCGGCCGATACTAGATATCACATTAATCACGCCCCCTTCCTCTCT
CGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATCTCACATCGCTAC
CCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTCGAAATGACCATG
GGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGAATGCATCAAGAC
AGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATATCCCAGGTGAAT
CTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTGGGGGGTAATTCC
GATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGGGCTTGCCGTATA
TTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCGAGGCCACCGACT
TTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCGGTAGTATCACAC
CTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATCAAAACTACTCAT
GTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAACAGGAGAAGGGCT
TCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAGGTCAAGATGTTG
ACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTATTGGGTGAAGGA
TCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTGAGGATCTTATCG
GCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGGGATAAGCTGGGA
ATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAACAAAAGTCACGA
CGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACATAAGTTCTACAA
AGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCTCAAATTCTCGCC
TATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGTTGACAGTTCCGC
TATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAGACTCGATCGAGG
AAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGCCAGAAAGTTGCC
CATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAAGAGTGACTGTTT
GCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCATCAAGGAGAGTG
TCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGACTCACTCGCTGC
GTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCAGTTGACAGGCTG
TCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCGTCCTCAAGGACT
GTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACGGATGCTAAGAAT
GAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGGAGATGAGGGAAT
GGACGATATGGATGAGTTCGACGGTTGAGTCTGTTTATGAGTTCAGTGGC
GACTGGTTCGATAAATATTTCACATACCCCTGCTTATGTCTCGATGAGAA
AGACGAAATGATTTTCAAAAGTTACGTCACTGGTGGACATTGACCATTAA
GTTGCACCTGATGCGCAGGCTACTTGTAGAGCTGGTATACACAACATTCT
CGACCGGCGGCCGACTCAGTCCGATCTAGTCCGAT
back to top

Coding sequence (CDS) from alignment at KZ851919.1:179581..181715+

>M747DRAFT_261527-T1 ID=M747DRAFT_261527-T1|Name=M747DRAFT_261527-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3180bp|location=Sequence derived from alignment at KZ851919.1:179581..181715+ (Aspergillus niger ATCC 13496)
ATGCCATCCTCGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCT
ATGCGGTCCCGGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGT
ACCCGAAGAGTCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCC
ATCGACTTTTGCAAGCGGTCAGGCATTACAGATATCACATTAATCACGCC
CCCTTCCTCTCTCGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATC
TCACATCGCTACCCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTC
GAAATGACCATGGGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGA
ATGCATCAAGACAGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATA
TCCCAGGTGAATCTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTG
GGGGGTAATTCCGATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGG
GCTTGCCGTATATTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCG
AGGCCACCGACTTTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCG
GTAGTATCACACCTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATC
AAAACTACTCATGTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAAC
AGGAGAAGGGCTTCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAG
GTCAAGATGTTGACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTA
TTGGGTGAAGGATCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTG
AGGATCTTATCGGCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGG
GATAAGCTGGGAATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAA
CAAAAGTCACGACGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACA
TAAGTTCTACAAAGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCT
CAAATTCTCGCCTATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGT
TGACAGTTCCGCTATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAG
ACTCGATCGAGGAAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGC
CAGAAAGTTGCCCATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAA
GAGTGACTGTTTGCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCA
TCAAGGAGAGTGTCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGA
CTCACTCGCTGCGTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCA
GTTGACAGGCTGTCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCG
TCCTCAAGGACTGTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACG
GATGCTAAGAATGAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGG
AGATGAGGGAATGGACGATATGGATGAGTTCGACGGTTGAATGCCATCCT
CGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCTATGCGGTCCC
GGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGTACCCGAAGAG
TCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCCATCGACTTTT
GCAAGCGGTCAGGCATTACAGATATCACATTAATCACGCCCCCTTCCTCT
CTCGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATCTCACATCGCT
ACCCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTCGAAATGACCA
TGGGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGAATGCATCAAG
ACAGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATATCCCAGGTGA
ATCTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTGGGGGGTAATT
CCGATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGGGCTTGCCGTA
TATTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCGAGGCCACCGA
CTTTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCGGTAGTATCAC
ACCTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATCAAAACTACTC
ATGTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAACAGGAGAAGGG
CTTCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAGGTCAAGATGT
TGACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTATTGGGTGAAG
GATCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTGAGGATCTTAT
CGGCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGGGATAAGCTGG
GAATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAACAAAAGTCAC
GACGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACATAAGTTCTAC
AAAGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCTCAAATTCTCG
CCTATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGTTGACAGTTCC
GCTATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAGACTCGATCGA
GGAAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGCCAGAAAGTTG
CCCATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAAGAGTGACTGT
TTGCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCATCAAGGAGAG
TGTCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGACTCACTCGCT
GCGTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCAGTTGACAGGC
TGTCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCGTCCTCAAGGA
CTGTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACGGATGCTAAGA
ATGAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGGAGATGAGGGA
ATGGACGATATGGATGAGTTCGACGGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_261527M747DRAFT_261527Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261527-T1.utr5p1M747DRAFT_261527-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261527-T1.exon1M747DRAFT_261527-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_261527-T1.exon2M747DRAFT_261527-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261527-T1.cdsM747DRAFT_261527-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261527-T1.utr3p1M747DRAFT_261527-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_261527-T1M747DRAFT_261527-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011004
DBxrefInterPro:IPR001451
DBxrefInterPro:IPR029044
DBxrefPFAM:PF00132
Producteukaryotic translation initiation factor subunit eIF2B-gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851919.1supercontigKZ851919.1:179581..181715 +
Powered by Drupal