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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851920.1:78519..80314+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_261832-T1 ID=M747DRAFT_261832-T1|Name=M747DRAFT_261832-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1796bp|location=Sequence derived from alignment at KZ851920.1:78519..80314+ (Aspergillus niger ATCC 13496)
CCGGATCGGAGTTTCCCAGTTTCGCCGACCCAGAGTCATGTGACCCCAGC
TGGGGAAAGCAATATTGGCATGTGATGCTCCCTCGTCACTTGGCTGAGTT
CCCCGCAGCGAAAGCGAAAGCAAAAGCAAACGCAGCCTGCAATCCACCCT
TTTAAGGTTACTCCTCTCTTCATTCTCGCAGGGCGTGGAACTTACTTAGT
GCAACTGCGCCCTATTCCTGATACCTGTAAGATGGGCTTGCTCACTCCTC
CCTTTTCTCACGGTTGCCTGGTTGTTACAGCATTGTCCGCTCGCCGAAGA
CCCCCTCCCCTCTCTCTCCGTTCGCGACGAGACCCCAGTGATCACCTGTA
GAACACGCAAGCAGTTAACAATCAAGCCATGTCTGCAGGGCCGTTTCCAG
ATTTCTCTGCTAGCAGATCTTCTCAACCTGGATTATATTCCCTCACAGGC
AATTCCATTGACGGCAAGGGCGGAGCTAGCCTAGGAAAGCCTGATCTCCT
GGTGAGCCCAGCCATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAA
CAAACACGAACCACTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGAT
GGAACCAAATACAAGGATGGACAATGGTCGCCAGATAATGAGAGAATCGT
TCTGGGACCATACGATTATATGCTACAGCACCCCGGCAAAGACATACGGC
GGCAGCTTATCAACGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGC
CTCTCAATCATCACAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACT
GTAAGCTGTTTTCATCGTGCCTCGGTTTAGTCTGGACACCTACCTGACCT
ATGGCGTATGAGCCAGGATCGATGATGTCGAGGATAACTCTATTTTGCGA
CGCGGTATTCCCGTAGCTCATAACATATACGGCACCGCGCAAACCATCAA
CTCTGCGAACTATGTATATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGA
ACAACCCCGCTGCGATTGACATCTACGTCCAAGAGTTATTGAACCTACAC
CGCGGTCAAGGAATGGATCTCTTCTGGCGAGATACTCTGACTTGCCCCAG
CGAGGACGAGTATTTGGAAATGGTCGGTAACAAAACTGGGGGTTTGTTCC
GACTTGCAGTGAAGTTGATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGC
GTGAGCCTCGTCAACGTCATGGGGCTGATTTTCCAAATCTGCGACGACTA
CCTCAACCTGTCCAACACTACGTACACCAAGAACAAAGGTCTTTGTGAAG
ATCTCACGGAGGGAAAGTTCTCCTTTCCCATCATTCATAGTATCCGATCC
AACCCCGGAAACCACCAGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGA
TGACGAAGTCAAACTGTATGCAGTCAGTTACATGGAGAGCACTGGCAGTT
TTGCGCACACGCGGGACGTGGTCCGAGAATTGCGAGCCAAAGCACTGACC
CTAATTCAAGCGATCGATGGTGACCAAGCAGATGGACGCGAAGACGGCGC
CATGGTTCGGGCGATCCTCAACAAGATCACCGAGTCGACACTGGGGGAGT
GTGGTCCCCAGTAGTAGATTCAAACAGGCGATGGTCAAGCACTCATTCTC
GGGGATAATTCGCTGCCCATCCCTGGTTGGTTGGTTGGTCGATTGGATGG
GATCTCGTATTTTATACAGGATGTTGAAACGTGATATATTTTAGCCTATT
GATCAGATGCCTTATAATCTGAAACATTGCGCACTCATGGCGACTC back to topCoding sequence (CDS) from alignment at KZ851920.1:78519..80314+ >M747DRAFT_261832-T1 ID=M747DRAFT_261832-T1|Name=M747DRAFT_261832-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2340bp|location=Sequence derived from alignment at KZ851920.1:78519..80314+ (Aspergillus niger ATCC 13496)
ATGTCTGCAGGGCCGTTTCCAGATTTCTCTGCTAGCAGATCTTCTCAACC
TGGATTATATTCCCTCACAGGCAATTCCATTGACGGCAAGGGCGGAGCTA
GCCTAGGAAAGCCTGATCTCCTGGTGAGCCCAGCCATGGATCACACAGGC
CCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAA
TCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGT
CGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAG
CACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATG
GTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCA
TGCTTCATACTGCATCGTTACTGATCGATGATGTCGAGGATAACTCTATT
TTGCGACGCGGTATTCCCGTAGCTCATAACATATACGGCACCGCGCAAAC
CATCAACTCTGCGAACTATGTATATTTCCTTGCTCTGCAAGAGGTGCAAA
AGTTGAACAACCCCGCTGCGATTGACATCTACGTCCAAGAGTTATTGAAC
CTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAGATACTCTGACTTG
CCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAACAAAACTGGGGGTT
TGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAGTAGCTCCGGAAAG
GACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTTTCCAAATCTGCGA
CGACTACCTCAACCTGTCCAACACTACGTACACCAAGAACAAAGGTCTTT
GTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCATCATTCATAGTATC
CGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTCTCAAGCAAAAGAC
GAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTACATGGAGAGCACTG
GCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATTGCGAGCCAAAGCA
CTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAGATGGACGCGAAGA
CGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACCGAGTCGACACTGG
GGGAGTGTGGTCCCCAGTAGATGTCTGCAGGGCCGTTTCCAGATTTCTCT
GCTAGCAGATCTTCTCAACCTGGATTATATTCCCTCACAGGCAATTCCAT
TGACGGCAAGGGCGGAGCTAGCCTAGGAAAGCCTGATCTCCTGGTGAGCC
CAGCCATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACG
AACCACTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAA
ATACAAGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGAC
CATACGATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTT
ATCAACGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAAT
CATCACAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGATCGATG
ATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAAC
ATATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCT
TGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCT
ACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTC
TGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGT
CGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGG
CTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGG
CTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTA
CACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCT
TTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTG
AGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGT
CAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCC
GAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGAC
CAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAA
GATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519201.1 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR033749 |
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | farnesyltranstransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851920.1 | supercontig | KZ851920.1:78519..80314 + |
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