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M747DRAFT_262247-T1, M747DRAFT_262247-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_262247-T1
Unique NameM747DRAFT_262247-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:266906..267967-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_262247-T1 ID=M747DRAFT_262247-T1|Name=M747DRAFT_262247-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1062bp|location=Sequence derived from alignment at KZ851921.1:266906..267967- (Aspergillus niger ATCC 13496)
CCAAAACAGACTTCTAATTTCATCGTCTCATCTTCATTTTCATCCCATTG
ATCCATTGATTAGAAACAAAAGAAAGACCAATTGACCACTCTTCAACATG
CTCGCGTGGTGAGTTGAGCAATACCTACCCAATCACCACGGCTGCGACCT
CCACCCCCCAGACTAACAATAGTAAACTACAGGTACCAGAGATGTCTTAT
CCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGGTAAGCTTCAATC
CCCCCCATATCTCATTCTTTCAGTAAAGCTAAGACGGAAATAATCAGACC
CTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAAGGG
CCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACGGTG
GTGGTAAGCCCAGCCCCCGATCCCTCACCCCCCTTCATTCCCTCTAAACA
AAAGCAAAAATAATATACAGCTGTTTTCGGCCCGGTCGCCACAAAATGGT
TCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTT
GCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGG
TGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGA
AGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGG
CCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGT
GTTGACGGTTAATGTGGTTAATATTGGTATGTATATTTCTCTGCTTCTTT
TCTACGGATGTATCTTGGATATTGGGTAAAGCTAATACTTGGATAGGATG
GAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTG
CACCGGGAGTTTGACGTTTTGACTCTTTGGATTCCCTGTATCAATTATGT
TTGGGTTGGTTGTTTGCTACGGTATTGATTATGTCGGATAGATGGCAAAT
TTTACTGGCTTAGAATAGATTTCGATTTCTGTTATTCCCTTGTCTGAAAT
GATAATTGCCGG
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Coding sequence (CDS) from alignment at KZ851921.1:266906..267967-

>M747DRAFT_262247-T1 ID=M747DRAFT_262247-T1|Name=M747DRAFT_262247-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2730bp|location=Sequence derived from alignment at KZ851921.1:266906..267967- (Aspergillus niger ATCC 13496)
GATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAG
GTTGCACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTC
CAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGC
GGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTG
TCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAG
CTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCC
AGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGT
TGACGGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCT
CGCCCAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCC
GAACTGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCC
AGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATG
GAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTG
CACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAAT
TCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCG
CGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTT
CCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCA
GTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCG
GTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGAC
GGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCC
CAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAAC
TGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCG
TCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAAT
TGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACC
GGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCT
ACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCG
TTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTC
ACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAG
GACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTC
AGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTT
AATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAAC
AAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGC
CGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCT
CTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCT
TCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGA
GTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAG
AACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGG
TGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCA
GTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACG
TACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGAC
GCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATG
TGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGC
CGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAA
TGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCT
TGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCTTCCT
GAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTT
GACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAGAACC
GCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGGTGCT
GACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCAGTAT
GTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACGTACT
GGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGACGCTG
AACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATGTGGT
TAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTC
GAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGC
TTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGAC
GCAGAGCCTCACCACAGCGATGCTCGCGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_1M747DRAFT_262247Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262247-T1M747DRAFT_262247-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262247-T1.cdsM747DRAFT_262247-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262247-T1.utr3p1M747DRAFT_262247-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262247-T1.exon5M747DRAFT_262247-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_262247-T1.exon4M747DRAFT_262247-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_262247-T1.exon3M747DRAFT_262247-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_262247-T1.exon2M747DRAFT_262247-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_262247-T1.exon1M747DRAFT_262247-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_262247-T1.utr5p1M747DRAFT_262247-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:266906..267967 -
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