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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851926.1:78330..79305- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_263512-T1 ID=M747DRAFT_263512-T1|Name=M747DRAFT_263512-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=976bp|location=Sequence derived from alignment at KZ851926.1:78330..79305- (Aspergillus niger ATCC 13496)
CTTCTTTGCAGACTCACTTCCTCTCATTATTTGGCGAACTCCGCTCACAT
TGCTTCCCGGCGTTTAAACCTTTTTTTCTTTATTCAATCCTTGCTTGTCT
AACGCCGAGCACTATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGG
ACCGGCCGAGTGCCTACTATCTGGGCAAGGTGAGCTTCATCTCTACGACT
AGCGGACCATGACAATACTAATTCATTAATCCTCTCCAGAACAAGCGTCG
CAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAACC
TCAAGGATGCCACCACTCTCTACGTTGGCAATCTGTATGTTACAGAGTAT
CTCCGTTGTCAAGTCCTTGCTAACAACACAAGTTCTTTTTACACCACCGA
AGAGCAGATCCATGAGCTATTTGCCAAGTGAGCGGAAACCACCACCGAAT
GCGTTATCGACGAGTACCGAGCTGATGGAGTACAGGTGCGGCGAGATTAA
GCGGCTAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTT
GCTTCGTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAATAC
ATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGATCC
TGGCTTCGAGGAGGGTCGGCAATACGGGTATGTATATGATCGGGATTCTC
GAACGCGCAGGCTGCTGACGTTGGTAGACGTGGTAAATCGGGTGGTCAGG
TCCGCGATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGA
CGTGCCTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAA
GGGTAAGTAAAACAGGGGAAGACAGACATATTCAGGTTGGCGCAAAAACG
GCGTTTTCATATGTACAATCTATTTCTATCATTGCTAGAAAGGCATTCAA
GAAAGAAAAATTTACATCAGATACCC back to topCoding sequence (CDS) from alignment at KZ851926.1:78330..79305- >M747DRAFT_263512-T1 ID=M747DRAFT_263512-T1|Name=M747DRAFT_263512-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2655bp|location=Sequence derived from alignment at KZ851926.1:78330..79305- (Aspergillus niger ATCC 13496)
ACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACG
ACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGA
CGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAAGTGCGGCGAGATTAAGC
GGCTAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGC
TTCGTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAATACAT
TGGTGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTG
GCTTCGAGGAGGGTCGGCAATACGGTTCTTTTTACACCACCGAAGAGCAG
ATCCATGAGCTATTTGCCAAAACAAGCGTCGCAAGTTCAGCCATGATGAG
GGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCT
CTACGTTGGCAATCTATGAGCACCCTCGTCCACAACACCGTCGAACGCCT
GGACCGGCCGAGTGCCTACTATCTGGGCAAGACGTGGTAAATCGGGTGGT
CAGGTCCGCGATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTA
TGGACGTGCCTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATG
GTAAGGGTAAGTAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGA
CCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTACACCC
ATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCTGGAC
GAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCA
ATACGGTTCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATTTGCCA
AAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATC
CCACCGACAACCTCAAGGATGCCACCACTCTCTACGTTGGCAATCTATGA
GCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGCCTAC
TATCTGGGCAAGACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACC
GGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGAT
GACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAAGTGCG
GCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTACAACAAGACCCCC
TGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGATGCGCTGGACTG
TCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGGACGG
ATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGTTCTTTTTACACC
ACCGAAGAGCAGATCCATGAGCTATTTGCCAAAACAAGCGTCGCAAGTTC
AGCCATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGA
TGCCACCACTCTCTACGTTGGCAATCTATGAGCACCCTCGTCCACAACAC
CGTCGAACGCCTGGACCGGCCGAGTGCCTACTATCTGGGCAAGACGTGGT
AAATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACGACCCTGG
TCGCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGACGGGAGG
AGGAGGAGTATGGTAAGGGTAAGTAAGTGCGGCGAGATTAAGCGGCTAGT
CATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCG
AATATTACACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGC
ACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGA
GGAGGGTCGGCAATACGGTTCTTTTTACACCACCGAAGAGCAGATCCATG
AGCTATTTGCCAAAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGA
AACCCGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCTCTACGTT
GGCAATCTATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGG
CCGAGTGCCTACTATCTGGGCAAGACGTGGTAAATCGGGTGGTCAGGTCC
GCGATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGT
GCCTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGG
TAAGTAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTAC
AACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGA
TGCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAA
TCATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGT
TCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATTTGCCAAAACAAG
CGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCACCGA
CAACCTCAAGGATGCCACCACTCTCTACGTTGGCAATCTATGAGCACCCT
CGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGCCTACTATCTGG
GCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G04 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034148 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | Nuclear cap-binding protein subunit 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851926.1 | supercontig | KZ851926.1:78330..79305 - |
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