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M747DRAFT_265546-T1, M747DRAFT_265546-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_265546-T1
Unique NameM747DRAFT_265546-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:140845..143211-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_265546-T1 ID=M747DRAFT_265546-T1|Name=M747DRAFT_265546-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2367bp|location=Sequence derived from alignment at KZ851934.1:140845..143211- (Aspergillus niger ATCC 13496)
CCACCTGGCCTTTCCTAGAGCATTCCCTTGTTGTTGCTTAGATCAGTAAA
TGTGTGAATCTTCCTCTATACCTTCGTGAATCTTGACAACTCACTTTGAC
TGACACACGTGACGGCAGAGATTTTTACGTCATTCTTGTGATTTATCTAC
TTTAGCACAGAAGACAGTCTTATCCTGGCCCGCAATATGCTTGCAGAGCT
TCCTCCAGAGATTATACAGCTTATTACAAGCTATTTGCCATCTGCCAGCG
CGCTTGTGAATCTGTCAAGGACCTGCTGGCGCCTACACCACGTTGTCGCT
GCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAGACCAAGTTTCCTGG
TGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCAGGCACTCACATCTC
GCTCTCGGGCATTAGACAAACACGCAGTCGTCGGAAGATTTGTCGTACCT
GCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCAACACGACGTGACAA
TCCTACTCATGGATATCGCCCTGCTTTGGACTCGTATGAAGTCTGGAATG
GCTCTTCATGGAACGACCGGAAGGAGGTGCTCGCCTGGGGCGCGGCAGAT
GAACTAGTTCTGCGCATCGCTGAACCTGGCCCCAATTCAAAGGGGAAGTG
GGTGGTCTTCAATGATCTCGATCACATCAGCAGCCATGATGACATCTGTG
GTGTCCATATTCTACGTCCTGGACACCCTTCCAAGGAGCCCCAGACTGAA
CATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTCCATCTCTCTATCGA
CCCTAATATCGCCTGCCATATTTACAAGCAGCGGTTCATGACTTCCGGAG
GGGGCATAGAGAGAACAGATATGAGTGACGGAAAGGACCCGATCTTATCT
GCCCACTTGAGCGACGGATCGATATCTTTCTTCAGCACCACTTCTGGAGA
GGCGGAAGTCTACCCATTTGCTCGTCTCAATGCTGATTCTAGCAACAATG
CAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCCTTTCGCCCTCTCTA
TTCGCAGTCGGCACAGGACGCATCCACGATGCAATTACTATCTCCGCCAT
CACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAATGTGGAGCTGGTAG
ATTTCGAAAGACTTAATCTCGATACGACCATCAGATCCAACGTCAACGCC
ATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTCGCAGCCTGGGGTGA
TCGAGCTATCAGGTACAACCACCCCATTTGCCATTATTCCACGCTCTATG
CTAACACTCTCAGACTGCACGACCTCCGCTCAAACGAAGAATACGAAAAG
ACCTACCGTGATACCACGGACCAGAACCCCATCTACTGCATCCACCCCTT
CGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGACGCCCTAGTCAAGA
TCTTTGATTTACGCATGCCCAAACATGACACATACAGCTATCGTGATGCA
CGCCCTTCCCGAACCCTTCTCAAAAACAACGAACCAATCGTAGACAGCCT
CTCAAGCCTCTCCCTCACCGCAACCAACAATAGCATCGCCTTCCCCCGCA
AAGACATCTCCATCTTCCTCTCCGCCCACCCTCCCTCTAGCCGGCCCCAA
GGCCGTCGCCGCCACAACACCCGCTCCTACCGCGGTGCAATCTACAGCAT
GACTTCGCCCTCCCCTTCCTCACCAACTATCTACACTGGCGTCGCGGATG
GCGTCGTTCGCCTTGACTTCGCCTCTACGGATGACCTCCTCGGCCCTTGT
CAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAACGATGTGCGTCTCGA
GAACACTGTTGCACACACCCGCTCTGCCGACAAAGTCCTGGATTTATCGG
GCTACGAGCGCCCTGAGGATACTACTGCTTCTATCACTTTGCGCACGCAG
CAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTTGCGGAGGAGATCAC
GGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACCGGGGGCGTGGAGAC
GGGCTGATTGATAGGAGAGTAGTTGTTGATCGGGAGAGGATGTTGGTTTA
TATTGGAGGAAGGGGGCATGGGGCTTGTGTATGCTGTGTGTACTGGGTGC
TCTCTTCCGTGCTATGTTGCGCAGAGAGGTTTTAAAGGAGACTTGTTCCA
TTGGAAACGCATGAGCCATGCATTGTTGACTGGGTATAGTCCTTTGGCTG
GACTGGGGACTGTAGTTCATGACAGGATGCATGGATGAATCTGAATCGAT
CCTAGGAAGAGACTCATGCCTACGATCTACCACCACGAGTACGACATGTA
CGAATACTTCAAAGTCT
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Coding sequence (CDS) from alignment at KZ851934.1:140845..143211-

>M747DRAFT_265546-T1 ID=M747DRAFT_265546-T1|Name=M747DRAFT_265546-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3648bp|location=Sequence derived from alignment at KZ851934.1:140845..143211- (Aspergillus niger ATCC 13496)
ACTGCACGACCTCCGCTCAAACGAAGAATACGAAAAGACCTACCGTGATA
CCACGGACCAGAACCCCATCTACTGCATCCACCCCTTCGGCCACGACCGC
TTCGTCGTCGGCGCCGGCGGTGACGCCCTAGTCAAGATCTTTGATTTACG
CATGCCCAAACATGACACATACAGCTATCGTGATGCACGCCCTTCCCGAA
CCCTTCTCAAAAACAACGAACCAATCGTAGACAGCCTCTCAAGCCTCTCC
CTCACCGCAACCAACAATAGCATCGCCTTCCCCCGCAAAGACATCTCCAT
CTTCCTCTCCGCCCACCCTCCCTCTAGCCGGCCCCAAGGCCGTCGCCGCC
ACAACACCCGCTCCTACCGCGGTGCAATCTACAGCATGACTTCGCCCTCC
CCTTCCTCACCAACTATCTACACTGGCGTCGCGGATGGCGTCGTTCGCCT
TGACTTCGCCTCTACGGATGACCTCCTCGGCCCTTGTCAGGATTGGTACC
GGGAGCCACTTCTGCTCTCTAACGATGTGCGTCTCGAGAACACTGTTGCA
CACACCCGCTCTGCCGACAAAGTCCTGGATTTATCGGGCTACGAGCGCCC
TGAGGATACTACTGCTTCTATCACTTTGCGCACGCAGCAGCCGTTTGTGT
TTGTCGGGGTGGAGGATGGTCTTGCGGAGGAGATCACGGGGTGGGATCGG
AGGTGGGAGAGGTTGGAGAAACCGGGGGCGTGGAGACGGGCTGATTGAAT
GCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTTGC
CATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGCTGGCGCCTACAC
CACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAGAC
CAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCAGG
CACTCACATCTCGCTCTCGGGCATTAGACAAACACGCAGTCGTCGGAAGA
TTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCAAC
ACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTATG
AAGTCTGGAATGGCTCTTCATGGAACGACCGGAAGGAGGTGCTCGCCTGG
GGCGCGGCAGATGAACTAGTTCTGCGCATCGCTGAACCTGGCCCCAATTC
AAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGCAGCCATG
ATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGGAG
CCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTCCA
TCTCTCTATCGACCCTAATATCGCCTGCCATATTTACAAGCAGCGGTTCA
TGACTTCCGGAGGGGGCATAGAGAGAACAGATATGAGTGACGGAAAGGAC
CCGATCTTATCTGCCCACTTGAGCGACGGATCGATATCTTTCTTCAGCAC
CACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCTGATT
CTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCCTT
TCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATTAC
TATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAATG
TGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGATCC
AACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTCGC
AGCCTGGGGTGATCGAGCTATCAGACTGCACGACCTCCGCTCAAACGAAG
AATACGAAAAGACCTACCGTGATACCACGGACCAGAACCCCATCTACTGC
ATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGACGC
CCTAGTCAAGATCTTTGATTTACGCATGCCCAAACATGACACATACAGCT
ATCGTGATGCACGCCCTTCCCGAACCCTTCTCAAAAACAACGAACCAATC
GTAGACAGCCTCTCAAGCCTCTCCCTCACCGCAACCAACAATAGCATCGC
CTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCTCCCTCTA
GCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGCGGTGCA
ATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACACTGG
CGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGATGACCTCC
TCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAACGAT
GTGCGTCTCGAGAACACTGTTGCACACACCCGCTCTGCCGACAAAGTCCT
GGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATCACTT
TGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTTGCG
GAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACCGGG
GGCGTGGAGACGGGCTGATTGAATGCTTGCAGAGCTTCCTCCAGAGATTA
TACAGCTTATTACAAGCTATTTGCCATCTGCCAGCGCGCTTGTGAATCTG
TCAAGGACCTGCTGGCGCCTACACCACGTTGTCGCTGCTCAAGATTGGCG
AATCTTCAGATCCTTCGTCGAGACCAAGTTTCCTGGTGTGGAAACGCCCG
AAATCTGGCGAGAGGCCGCTCAGGCACTCACATCTCGCTCTCGGGCATTA
GACAAACACGCAGTCGTCGGAAGATTTGTCGTACCTGCCTCAGAAGCAGT
CAAGGTCGGATCCCATAGTTCAACACGACGTGACAATCCTACTCATGGAT
ATCGCCCTGCTTTGGACTCGTATGAAGTCTGGAATGGCTCTTCATGGAAC
GACCGGAAGGAGGTGCTCGCCTGGGGCGCGGCAGATGAACTAGTTCTGCG
CATCGCTGAACCTGGCCCCAATTCAAAGGGGAAGTGGGTGGTCTTCAATG
ATCTCGATCACATCAGCAGCCATGATGACATCTGTGGTGTCCATATTCTA
CGTCCTGGACACCCTTCCAAGGAGCCCCAGACTGAACATATAGTCGTTGC
AAGAGCGCGCGGAGAGCTTTTCCATCTCTCTATCGACCCTAATATCGCCT
GCCATATTTACAAGCAGCGGTTCATGACTTCCGGAGGGGGCATAGAGAGA
ACAGATATGAGTGACGGAAAGGACCCGATCTTATCTGCCCACTTGAGCGA
CGGATCGATATCTTTCTTCAGCACCACTTCTGGAGAGGCGGAAGTCTACC
CATTTGCTCGTCTCAATGCTGATTCTAGCAACAATGCAACCATCAGCTCT
CGCCACAAGTATTCCAAGTTCCTTTCGCCCTCTCTATTCGCAGTCGGCAC
AGGACGCATCCACGATGCAATTACTATCTCCGCCATCACGCCACAAGGTC
TATCACCAAGTCGTGAGCTCAATGTGGAGCTGGTAGATTTCGAAAGACTT
AATCTCGATACGACCATCAGATCCAACGTCAACGCCATTGCTCCACTCGA
TCCCACCGGACAAGTCTTCCTCGCAGCCTGGGGTGATCGAGCTATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_265546M747DRAFT_265546Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265546-T1M747DRAFT_265546-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265546-T1.cdsM747DRAFT_265546-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265546-T1.utr3p1M747DRAFT_265546-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265546-T1.exon3M747DRAFT_265546-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_265546-T1.exon2M747DRAFT_265546-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_265546-T1.exon1M747DRAFT_265546-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265546-T1.utr5p2M747DRAFT_265546-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_265546-T1.utr5p1M747DRAFT_265546-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:140845..143211 -
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