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M747DRAFT_265567-T1, M747DRAFT_265567-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_265567-T1
Unique NameM747DRAFT_265567-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:165604..166970+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_265567-T1 ID=M747DRAFT_265567-T1|Name=M747DRAFT_265567-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1367bp|location=Sequence derived from alignment at KZ851934.1:165604..166970+ (Aspergillus niger ATCC 13496)
CCAGGCCCGCGAAATCAGTTTATCAAAAATTGCTCCCCTCATCGCCTCCA
CCACCACCCACTATACGAACCCCCCTCAACCCAGAACCACACCCACAAGC
CACCACCATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAG
TTATCATACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTG
CACGTCTTCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTT
CCACCCCGGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCA
CCGTCCTGGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGA
CTCGACCTATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGA
CGACAGTCTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGC
TCGTAATCGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTG
GTGGCGCAGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCG
GCGGCAGGCGCTGGATCGCGGGGCCGCGAAACTGGGCATTAAGCATGTGG
TGACGGGTCATAATGCGGATGATGTGGCGGAGACAGTGATGATGAATTTG
CTGAGAGGGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGG
GTCCGCCGCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATG
AGAAGGAGATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCT
ACGGAGTGTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTT
GATTAAGGATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTA
AGTCTGGGGAGGATATGGCGCTTCTGGTGCCCGCTGAGGTTAGGGGGAAG
GGGGCTGAGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAA
TGGGCGGACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGG
AGGATGAGGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTG
TCTAGGAGGCAGCAGCAGCAGTTGGAGCAGATGCAGACGCCGGCTCAGAA
GAAGGTCAAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCT
CCAGTCAGCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAG
AATCGGCCCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGA
GAGCAGCTCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTG
TTTGAAGATATACAGTT
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Coding sequence (CDS) from alignment at KZ851934.1:165604..166970+

>M747DRAFT_265567-T1 ID=M747DRAFT_265567-T1|Name=M747DRAFT_265567-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1248bp|location=Sequence derived from alignment at KZ851934.1:165604..166970+ (Aspergillus niger ATCC 13496)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTTATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCGAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGATGATGTGGCGGAGACAGTGATGATGAATTTGCTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCGCTGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGTTGGAGCAGATGCAGACGCCGGCTCAGAAGAAGGTC
AAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAGTCA
GCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATCGGC
CCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGCAGC
TCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0034227tRNA thio-modification
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS6M747DRAFT_265567Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265567-T1.utr5p1M747DRAFT_265567-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265567-T1.exon1M747DRAFT_265567-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265567-T1.cdsM747DRAFT_265567-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265567-T1.utr3p1M747DRAFT_265567-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265567-T1M747DRAFT_265567-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262IZ6
DBxrefInterPro:IPR000541
DBxrefInterPro:IPR032442
DBxrefInterPro:IPR011063
DBxrefPFAM:PF16503
DBxrefPFAM:PF01171
Productnucleotidyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:165604..166970 +
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