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M747DRAFT_265860-T1, M747DRAFT_265860-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_265860-T1
Unique NameM747DRAFT_265860-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851935.1:258826..260208-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_265860-T1 ID=M747DRAFT_265860-T1|Name=M747DRAFT_265860-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1383bp|location=Sequence derived from alignment at KZ851935.1:258826..260208- (Aspergillus niger ATCC 13496)
CTGGGTGTCATTGATTATTGATTTGGTGGCAAGAGAATTCTGAAGAATCT
CCCCCTCGCTGAGCTGCACAGCAAAATACATCTCCAACAATTCAATACTC
TGAGAACCGAAAGGACGCTTGACAGCAATAACTATTCTTAGTAACCGTCT
AAGCGCGAAACAATTACAATGTCGGCAGCAGTTGCGTCGCTATTTTCCCT
CAGCGGCAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGG
CAATGGCTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAG
GTGCGCACAGCCGCGACCTCCCCATTGGCGCCCACGGAAATGAGAGGGGA
GCCATGACGAAACGTTGTGTGGAACTAACGGTCTGCGAGCAGAGAGACGA
GTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGGCAAGAAAG
CTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCAAGGGTGTC
ATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTACTCAACTG
CGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGACGAAGATT
GGGATGAGGTAGGTGTAAAATGACTCTCCTATTTCAGCCACCTATTTACC
CCTCTCTATTTTTGGACCTCCCCTTCTCCTGAAGTGGAGCTGAAGACTAG
TATACTAACTATTGATTTATATAGGTTATCCAAGTCAATCTGACGTCCGT
ATTTACGTTATGTCGAGAGTTCGGTGCATACTTGTTGGCGCGAGATGAGT
CAGAGTTTCCAACAGGTCGTCGTGGAGCTATCATCAATGTCGCATCGCTC
CTCACCTTCCAGGGAGGTATCACGGTACCTGCATACGCAGCGTCAAAGGG
AGGTGTCGCGCAACTGACGAAGGCCCTCTCCAACGAATGGGTGGCCAAGG
GTATCAACGTCAATGCAATTGCTCCTGGATACATCGCCACAGATATGAAC
ACTGACCTGATTAACGATTCCAACCGCAATGCTGGTATCATGGCTAGAAT
CCCGGCAGGCAGATGGGGCAAGCCAGAGGACTTCAAGGGCGTGATAGTGT
TCTTGGCAAGCCAAGCGAGTAGCTATGTCTCAGGCGAAATTATCACCGTT
GATGGCGGTTGGATGGGACGGTGAAAAGTCTTGTGGCTGCAAAGTTTAAT
GTTCTCTTTTCGTCCGTTTTTCTCCTGACTATTTGTTTTACTGCATCTTT
TACCCTTGCTGTGCTAGGGGTCTGTTCGAAAGTGATAGAAGGAACATACA
GCAACGATGTAAAACATCTGCTTTCACACCACGCGAGATTCAGTGTTTTG
TAATCAATATGTGAAGGATGCTATTATCAGGTC
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Coding sequence (CDS) from alignment at KZ851935.1:258826..260208-

>M747DRAFT_265860-T1 ID=M747DRAFT_265860-T1|Name=M747DRAFT_265860-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2394bp|location=Sequence derived from alignment at KZ851935.1:258826..260208- (Aspergillus niger ATCC 13496)
GTTATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGG
TGCATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTG
GAGCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACG
GTACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGC
CCTCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTC
CTGGATACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAAC
CGCAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCC
AGAGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCT
ATGTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGA
AGAGACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGG
CAAGAAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCA
AGGGTGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTA
CTCAACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGA
CGAAGATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCA
GCGGCAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCA
ATGGCTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAGGT
TATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTG
CATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGA
GCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGT
ACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCC
TCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCT
GGATACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAACCG
CAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAG
AGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTAT
GTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAAG
AGACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGGCA
AGAAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCAAG
GGTGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTACT
CAACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGACG
AAGATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGC
GGCAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAAT
GGCTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAGGTTA
TCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTGCA
TACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGAGC
TATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGTAC
CTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCCTC
TCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCTGG
ATACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAACCGCA
ATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAGAG
GACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTATGT
CTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAAGAG
ACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGGCAAG
AAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCAAGGG
TGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTACTCA
ACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGACGAA
GATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGG
CAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGG
CTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_265860M747DRAFT_265860Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265860-T1M747DRAFT_265860-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265860-T1.cdsM747DRAFT_265860-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265860-T1.utr3p1M747DRAFT_265860-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265860-T1.exon3M747DRAFT_265860-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_265860-T1.exon2M747DRAFT_265860-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_265860-T1.exon1M747DRAFT_265860-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_265860-T1.utr5p1M747DRAFT_265860-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Product2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851935.1supercontigKZ851935.1:258826..260208 -
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