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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851939.1:219894..221932+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_266598-T1 ID=M747DRAFT_266598-T1|Name=M747DRAFT_266598-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2039bp|location=Sequence derived from alignment at KZ851939.1:219894..221932+ (Aspergillus niger ATCC 13496)
GTTATTTGCATTACTCTGCTTTGTTTTTTTCCCTCGGACAAAAACAATCA
CAGCCATGGCTCCGAAATCTCTGGCGGAACAGATGGCCGAGTTGGAGGAT
TTGACTCCTCGTGGTAATTATTCCAATCTCAGGTGATACTTGTGTTCGGT
GGACCTGGTTCTGATTGTGTTGTTTTCTAGACTACGACCCTGAGGATCTT
GATCGCGGAAACCAGGATAGTGATGAAGAGGGTGCCGGTGCTAAGGATGA
GAATGCGGGGAGGGAGCATTATCAGGCTGTTGGGTAAGTTTTCCTTCATT
TCTCGATTTGTTTATTGGGTGGTGTGTGGTGTTTATGGAGGGCGTTGTCT
AAATCATTGTGTCATTATAGGAAAGCGAAGCTTCGCAAGCAGGACCCGAT
CTCTCTCGGAAAGCAATATGCTGGGTCGAAAGTAAGTCGCGCGGCGTTGG
AGGCTGATAGTGATGATGATCCGTTTGCGGCGCGATCGGGCGATGAGGAT
GAGGATGATGACGAGGAGGACGAGGAGGAAGATGAAGATGAAGATCTGGA
GCTGGGTAGCGACGAGGATGATGAGGACATCTCGGAGAGTGAAGAGGAGG
AGGAGGAGCGCCCATCCAAGTCCGCAAAGAAGGGAAAGAAGCAGGTCGAG
CTGGACGACATGGACACCGACGAGTCGGACGACCTTGAAGGCAGCGAGGG
ATCTTTCGACGAGGACGAGATGCCGTCTGACGAAGATGAGGAGGATGAAG
ACGACGAGTCGGATGACGAGGACGACGACGAAGAATCAGAATCCGACTCC
GACTCCAAACCGCGCAAACCCACCGACGACCGCGACGAACTCCGCCGCCT
CATGGCGACCGACCAAAAGACCATCGCCGCGAGCATCTCCCAAGCGGCCA
AAGCCGACGCCGCGAAAGGTAAAGCCGTGAAGCAACAGCGCGCCACCTTC
GACGCCCTCCTCAACACCCGAATCAAGCTCCAAAAGGGCCTCACAGCCAT
CAACCAGCTCTCCCTCGCCGCCACCTCCCCCGACGCCGACTCCGAAGAAG
CCATCACCTCCGCCGAATCCGCCGCTCTCGCCCTCTGGTCCACATTGGAA
GACTTGCGCGTTGCGCTCGCCGACGCCCACAACACCAACGCAGAGGAACC
AAAGAAGCGAAAGCGCGTAGACACCGACACGCCCACCGCGACTCTCTGGA
AGCGCATGACCGATCTTGAATCCGCCGCGATTACCCACCGCCGCACCATC
CTCGACAAATGGTCCGCGAAGGTCCGCGGCTCGACCGCCACGACGGCCGC
AAACTCACGCGGCAAGCTCCTCAACCCGTCCGGCTCGGGCGCGCAATCCA
TCACCGCCGTCCTGGACGCCCAGGTCGCGACTGAAACGGGCGACCATTCC
CGCGCTGCTAAGCGCGTCCGTCAAGACACTACCACTACCACTACTGAGGG
CGGAGCTACGACTCCCATCTACGACGACACCGTCTTCTACCAATCCCTAC
TGCGCGATCTCGTCGAGCAGCGCATGGCTTCCTCCGACGCGATCACGAAC
GGCCTCGATACCCTGCACATACAACTGCCGACGCGCGGCGGGGCGGCGAT
TCACCCTGTTACGGGGATGCGGAAGGATAAGGTCAAGCGGGATGTGGATA
CGCGGGCGTCGAAGGGCCGGAAGATGCGGTTCGATGTGCATGAGAAGTTG
CAGAATTTTATGGCGCCGGAGGATCGCGGAAGCTGGACGAAGCATGCGCG
CGAGGAGTTCTTTGCGTCGTTGTTGGGCAAGACGGCGAGTGGGTTATTGA
GGGAGGAGAGTGGTGATGAGGAGAGTGGCGCGGAGAGTGAGGAGGATCGG
GAGGAGGGTGGATTGAGGCTTTTTAGGAGCTAGAGTGTAGTTCCTTTGGT
GGAGCTGTATAGTATTGATTGCTATTTGTTCTAAGAGTAGGTATTTGGGG
GAAAAGGTGTGGGTGTATATAGCTTGGATTGATTACTATGTATGGTATGT
GGATTGGTACACAACAACACAACACAACAAAAGTCACAG back to topCoding sequence (CDS) from alignment at KZ851939.1:219894..221932+ >M747DRAFT_266598-T1 ID=M747DRAFT_266598-T1|Name=M747DRAFT_266598-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5022bp|location=Sequence derived from alignment at KZ851939.1:219894..221932+ (Aspergillus niger ATCC 13496)
ATGGCTCCGAAATCTCTGGCGGAACAGATGGCCGAGTTGGAGGATTTGAC
TCCTCGTGACTACGACCCTGAGGATCTTGATCGCGGAAACCAGGATAGTG
ATGAAGAGGGTGCCGGTGCTAAGGATGAGAATGCGGGGAGGGAGCATTAT
CAGGCTGTTGGGAAAGCGAAGCTTCGCAAGCAGGACCCGATCTCTCTCGG
AAAGCAATATGCTGGGTCGAAAGTAAGTCGCGCGGCGTTGGAGGCTGATA
GTGATGATGATCCGTTTGCGGCGCGATCGGGCGATGAGGATGAGGATGAT
GACGAGGAGGACGAGGAGGAAGATGAAGATGAAGATCTGGAGCTGGGTAG
CGACGAGGATGATGAGGACATCTCGGAGAGTGAAGAGGAGGAGGAGGAGC
GCCCATCCAAGTCCGCAAAGAAGGGAAAGAAGCAGGTCGAGCTGGACGAC
ATGGACACCGACGAGTCGGACGACCTTGAAGGCAGCGAGGGATCTTTCGA
CGAGGACGAGATGCCGTCTGACGAAGATGAGGAGGATGAAGACGACGAGT
CGGATGACGAGGACGACGACGAAGAATCAGAATCCGACTCCGACTCCAAA
CCGCGCAAACCCACCGACGACCGCGACGAACTCCGCCGCCTCATGGCGAC
CGACCAAAAGACCATCGCCGCGAGCATCTCCCAAGCGGCCAAAGCCGACG
CCGCGAAAGGTAAAGCCGTGAAGCAACAGCGCGCCACCTTCGACGCCCTC
CTCAACACCCGAATCAAGCTCCAAAAGGGCCTCACAGCCATCAACCAGCT
CTCCCTCGCCGCCACCTCCCCCGACGCCGACTCCGAAGAAGCCATCACCT
CCGCCGAATCCGCCGCTCTCGCCCTCTGGTCCACATTGGAAGACTTGCGC
GTTGCGCTCGCCGACGCCCACAACACCAACGCAGAGGAACCAAAGAAGCG
AAAGCGCGTAGACACCGACACGCCCACCGCGACTCTCTGGAAGCGCATGA
CCGATCTTGAATCCGCCGCGATTACCCACCGCCGCACCATCCTCGACAAA
TGGTCCGCGAAGGTCCGCGGCTCGACCGCCACGACGGCCGCAAACTCACG
CGGCAAGCTCCTCAACCCGTCCGGCTCGGGCGCGCAATCCATCACCGCCG
TCCTGGACGCCCAGGTCGCGACTGAAACGGGCGACCATTCCCGCGCTGCT
AAGCGCGTCCGTCAAGACACTACCACTACCACTACTGAGGGCGGAGCTAC
GACTCCCATCTACGACGACACCGTCTTCTACCAATCCCTACTGCGCGATC
TCGTCGAGCAGCGCATGGCTTCCTCCGACGCGATCACGAACGGCCTCGAT
ACCCTGCACATACAACTGCCGACGCGCGGCGGGGCGGCGATTCACCCTGT
TACGGGGATGCGGAAGGATAAGGTCAAGCGGGATGTGGATACGCGGGCGT
CGAAGGGCCGGAAGATGCGGTTCGATGTGCATGAGAAGTTGCAGAATTTT
ATGGCGCCGGAGGATCGCGGAAGCTGGACGAAGCATGCGCGCGAGGAGTT
CTTTGCGTCGTTGTTGGGCAAGACGGCGAGTGGGTTATTGAGGGAGGAGA
GTGGTGATGAGGAGAGTGGCGCGGAGAGTGAGGAGGATCGGGAGGAGGGT
GGATTGAGGCTTTTTAGGAGCTAGATGGCTCCGAAATCTCTGGCGGAACA
GATGGCCGAGTTGGAGGATTTGACTCCTCGTGACTACGACCCTGAGGATC
TTGATCGCGGAAACCAGGATAGTGATGAAGAGGGTGCCGGTGCTAAGGAT
GAGAATGCGGGGAGGGAGCATTATCAGGCTGTTGGGAAAGCGAAGCTTCG
CAAGCAGGACCCGATCTCTCTCGGAAAGCAATATGCTGGGTCGAAAGTAA
GTCGCGCGGCGTTGGAGGCTGATAGTGATGATGATCCGTTTGCGGCGCGA
TCGGGCGATGAGGATGAGGATGATGACGAGGAGGACGAGGAGGAAGATGA
AGATGAAGATCTGGAGCTGGGTAGCGACGAGGATGATGAGGACATCTCGG
AGAGTGAAGAGGAGGAGGAGGAGCGCCCATCCAAGTCCGCAAAGAAGGGA
AAGAAGCAGGTCGAGCTGGACGACATGGACACCGACGAGTCGGACGACCT
TGAAGGCAGCGAGGGATCTTTCGACGAGGACGAGATGCCGTCTGACGAAG
ATGAGGAGGATGAAGACGACGAGTCGGATGACGAGGACGACGACGAAGAA
TCAGAATCCGACTCCGACTCCAAACCGCGCAAACCCACCGACGACCGCGA
CGAACTCCGCCGCCTCATGGCGACCGACCAAAAGACCATCGCCGCGAGCA
TCTCCCAAGCGGCCAAAGCCGACGCCGCGAAAGGTAAAGCCGTGAAGCAA
CAGCGCGCCACCTTCGACGCCCTCCTCAACACCCGAATCAAGCTCCAAAA
GGGCCTCACAGCCATCAACCAGCTCTCCCTCGCCGCCACCTCCCCCGACG
CCGACTCCGAAGAAGCCATCACCTCCGCCGAATCCGCCGCTCTCGCCCTC
TGGTCCACATTGGAAGACTTGCGCGTTGCGCTCGCCGACGCCCACAACAC
CAACGCAGAGGAACCAAAGAAGCGAAAGCGCGTAGACACCGACACGCCCA
CCGCGACTCTCTGGAAGCGCATGACCGATCTTGAATCCGCCGCGATTACC
CACCGCCGCACCATCCTCGACAAATGGTCCGCGAAGGTCCGCGGCTCGAC
CGCCACGACGGCCGCAAACTCACGCGGCAAGCTCCTCAACCCGTCCGGCT
CGGGCGCGCAATCCATCACCGCCGTCCTGGACGCCCAGGTCGCGACTGAA
ACGGGCGACCATTCCCGCGCTGCTAAGCGCGTCCGTCAAGACACTACCAC
TACCACTACTGAGGGCGGAGCTACGACTCCCATCTACGACGACACCGTCT
TCTACCAATCCCTACTGCGCGATCTCGTCGAGCAGCGCATGGCTTCCTCC
GACGCGATCACGAACGGCCTCGATACCCTGCACATACAACTGCCGACGCG
CGGCGGGGCGGCGATTCACCCTGTTACGGGGATGCGGAAGGATAAGGTCA
AGCGGGATGTGGATACGCGGGCGTCGAAGGGCCGGAAGATGCGGTTCGAT
GTGCATGAGAAGTTGCAGAATTTTATGGCGCCGGAGGATCGCGGAAGCTG
GACGAAGCATGCGCGCGAGGAGTTCTTTGCGTCGTTGTTGGGCAAGACGG
CGAGTGGGTTATTGAGGGAGGAGAGTGGTGATGAGGAGAGTGGCGCGGAG
AGTGAGGAGGATCGGGAGGAGGGTGGATTGAGGCTTTTTAGGAGCTAGAT
GGCTCCGAAATCTCTGGCGGAACAGATGGCCGAGTTGGAGGATTTGACTC
CTCGTGACTACGACCCTGAGGATCTTGATCGCGGAAACCAGGATAGTGAT
GAAGAGGGTGCCGGTGCTAAGGATGAGAATGCGGGGAGGGAGCATTATCA
GGCTGTTGGGAAAGCGAAGCTTCGCAAGCAGGACCCGATCTCTCTCGGAA
AGCAATATGCTGGGTCGAAAGTAAGTCGCGCGGCGTTGGAGGCTGATAGT
GATGATGATCCGTTTGCGGCGCGATCGGGCGATGAGGATGAGGATGATGA
CGAGGAGGACGAGGAGGAAGATGAAGATGAAGATCTGGAGCTGGGTAGCG
ACGAGGATGATGAGGACATCTCGGAGAGTGAAGAGGAGGAGGAGGAGCGC
CCATCCAAGTCCGCAAAGAAGGGAAAGAAGCAGGTCGAGCTGGACGACAT
GGACACCGACGAGTCGGACGACCTTGAAGGCAGCGAGGGATCTTTCGACG
AGGACGAGATGCCGTCTGACGAAGATGAGGAGGATGAAGACGACGAGTCG
GATGACGAGGACGACGACGAAGAATCAGAATCCGACTCCGACTCCAAACC
GCGCAAACCCACCGACGACCGCGACGAACTCCGCCGCCTCATGGCGACCG
ACCAAAAGACCATCGCCGCGAGCATCTCCCAAGCGGCCAAAGCCGACGCC
GCGAAAGGTAAAGCCGTGAAGCAACAGCGCGCCACCTTCGACGCCCTCCT
CAACACCCGAATCAAGCTCCAAAAGGGCCTCACAGCCATCAACCAGCTCT
CCCTCGCCGCCACCTCCCCCGACGCCGACTCCGAAGAAGCCATCACCTCC
GCCGAATCCGCCGCTCTCGCCCTCTGGTCCACATTGGAAGACTTGCGCGT
TGCGCTCGCCGACGCCCACAACACCAACGCAGAGGAACCAAAGAAGCGAA
AGCGCGTAGACACCGACACGCCCACCGCGACTCTCTGGAAGCGCATGACC
GATCTTGAATCCGCCGCGATTACCCACCGCCGCACCATCCTCGACAAATG
GTCCGCGAAGGTCCGCGGCTCGACCGCCACGACGGCCGCAAACTCACGCG
GCAAGCTCCTCAACCCGTCCGGCTCGGGCGCGCAATCCATCACCGCCGTC
CTGGACGCCCAGGTCGCGACTGAAACGGGCGACCATTCCCGCGCTGCTAA
GCGCGTCCGTCAAGACACTACCACTACCACTACTGAGGGCGGAGCTACGA
CTCCCATCTACGACGACACCGTCTTCTACCAATCCCTACTGCGCGATCTC
GTCGAGCAGCGCATGGCTTCCTCCGACGCGATCACGAACGGCCTCGATAC
CCTGCACATACAACTGCCGACGCGCGGCGGGGCGGCGATTCACCCTGTTA
CGGGGATGCGGAAGGATAAGGTCAAGCGGGATGTGGATACGCGGGCGTCG
AAGGGCCGGAAGATGCGGTTCGATGTGCATGAGAAGTTGCAGAATTTTAT
GGCGCCGGAGGATCGCGGAAGCTGGACGAAGCATGCGCGCGAGGAGTTCT
TTGCGTCGTTGTTGGGCAAGACGGCGAGTGGGTTATTGAGGGAGGAGAGT
GGTGATGAGGAGAGTGGCGCGGAGAGTGAGGAGGATCGGGAGGAGGGTGG
ATTGAGGCTTTTTAGGAGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262WSH |
| DBxref | InterPro:IPR025160 |
| DBxref | InterPro:IPR012617 |
| DBxref | PFAM:PF08164 |
| DBxref | PFAM:PF13339 |
| Product | rRNA-processing protein bfr2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851939.1 | supercontig | KZ851939.1:219894..221932 + |
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