|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851944.1:57871..60804+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_267408-T1 ID=M747DRAFT_267408-T1|Name=M747DRAFT_267408-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2934bp|location=Sequence derived from alignment at KZ851944.1:57871..60804+ (Aspergillus niger ATCC 13496)
CCCAGTTCCTCTTAACTCACTTTCTCACCTCTTGCATCTTTCTATTCTCT
CTCGAATTCGAGTAATCTGCGTCCAGTAATTTTCAAACTTGCATAGAAAG
TCGCCTACGTTGTTCCTTATCATCTTTTTTCATCTTCTGTGTCTCAAGCT
TTGCTAGCAACCCATACTTCGTCGCCGGATCGATCTCTATTAGCTTAGAT
CGCTCGGCTTTTTCCAGAATCATGGAGATGCCAACTTCGGAGTCTTCCTC
GATTCGGGTCGCGTTTGAAGGATGTGTAAGTCAACTTTACATTTCTAGAC
CTTGTACTTATTATCTTGCTGACCACAGAAACTTCTCTAGGGCCATGGAT
GTCTTCATGACATCTATGCGTCAGTCGATAAGGCTGCTGCTCTCAAGGGC
TGGGATGGTGTCGATTTAGTGATCATTGGCGGCGATTTCCAGGTAGGACT
TATATTGCCCCTGTCAACTTTCCTGCCTCTCCAGCTAACCTCAACCTAGG
CCGTCAGAAATGCCAATGACCTGGCCTGCATGTCGGTGCCAATGAAGTAC
AGAGAATTGGGAGACTTTCATGAATACTACAGTGGGCAGCGTGTTGCTCC
CTACCTCACAATCTTTGTTGGCGGGAACCACGAAGCTAGCAACCACATGT
TTGAACTTTACTATGGAGGGTGGGTAGCCCCGAATATCTACTACCTCGGT
GCGGCCAACGTCATCCGGTGTGGGCCCCTTCGCATCGCCGGAATGTCTGG
CATATGGAAGGGATATGACTATCGGAGGCCTCATTTTGAGAGGCTGCCTT
ACAATAGTGATGATGTTCAAAGCATCTATCACATCAGAGAACTCGACGTC
CGGAAATTGCTCCAAATCCGTACACAAGTTGATCTGGGATTATCCCACGA
CTGGCCTAAACAGGTCGAGCGTAGCGGAGACTTTGAGACTTTGTTCAGAA
AGAAGCTTGGATTCCGCGAGGATTCCCAGAATGGCCGGCTTGGTAGCATG
GCTGCTAAGCATGTTCTTGATCGGCTGCGCCCAGCCTATTGGTTCTCGGC
ACATCTACACGTTAAATTCGCGGCCCTAGTTCAGCATGCCGAGTATGTTG
TTCCTGAGCATCCCGCGGCTAAGAGGCAGGCTGCCACCGCTCCAACTGAT
GCCAGTCAGCGTTCAAGCGCTCCACAGGCATTTGCGCTGGATGGTGCCGT
ATTCACTTCGCTGGTTCTCGGTGAAGAGAACCCATTGAATGAGCATATGG
CCTCCGCTTCTACTGCAAAGTCTGGTAAGCAAATTGAAAGCCACGCTGTA
AATACCGGAGATTCTCAGTTGCAGTCGGAGAGTGGACAACCTGCTCGTCA
GCCATCCAAAACTGACGCATCGGCCGGAGAAGCAGCTGGCGACATGGCGA
CTAAGCTATCAGCGTGGAATAACTTCCACGCCGTTGCTGCCCGAAATGAA
GCGGCTGAGAATGATCTCTATTTGTCGGGCAAGGCACAGAATCATGGACC
CAACCCTTATGAGATTAAGCACAACCTGACCTGGAAAAGGGTTGAGACTG
ACATGGATGGCGTTAATCGAAAGATTGCAAGCGTCGAGAGAGAAGTTAGC
CCTGACCGCCAAAGCAATAAAAAGCAGAAGGTTCAGCATGAGTCTGAGAT
AGTGAAGAATAGCGACGAGATCGACCTAGATCTAGACAGTGACTCTGATG
ACGCATCTAGTAAGGCGCAGCCTGAAACAGCAGTTTCAGGAAATACTGGC
TCTCCCACGCACACGCCTACGACAAACCAAATGGAACGCGATAATGGCAA
CGCCCAAGCAGAACCAGACAAAGCGGCTGATGTCTCGCAGGATGTGCGCA
ACCAGCTGCCTGCCAGCTTCGCACGTCCACAGCCTGATCCGTATCCGGTC
AATGGCCCCTTGCCCGAGGCAATCTCCAACAAGATGACTAGTTTTCTTGC
ACTGGATAAATGCCTACCAAACCGCGAATTTCTCCAGCTCCTTGAGATCA
ATCCTATTTCGGACTTAGATGGGGCGAAGGTTGAACGCCCATATCGCTTG
CAATACGATAAGGAATGGCTGGCAATCACACGTGCGTTTGCCAATGACCT
TCACCTTGGTGATCCCAACGCCAGACCCTCTGCGGATAAGGGCGACGTCG
TTTACCGACCCCAGATTCTCGAAGAGGAGAAGTGGGTCGAGGAGAACGTT
GTTAAGCCTGGAAAGCTTGTCGTCCCGGAGAACTTCACTCAAACGGCGCC
CGTCTACGATCCCGCCGTACCTCTGACGACTGAAGAGATGCCAATGGAGT
ACACCAATCCTCAGACCACCGAATTTTGCGAATTGATTGGTATTGAAAAT
AAATTCGACATGAGTGACGCCGAGCGCCAGGCTAGAATGGCTCGGGGGCC
CCGTCCTAATAGCAACAGAGGCGGCATGAACCGTCCTCCTCGTCGTGGCG
GCTTTGGACGGGGTCGCGGACGCGGTGGTCGTGGACGCGGCAACCGTTAC
TGATTTTACGTCTCTTCACATTGCACGTTGCTTATCAAAGGCTGGTTCCA
TCTGTGATATCGTTGCTCTTCAGCTTAGTAGCGGCATGGCTGACGGCGCA
AGGAAGGTACCGCGGATGAGGAAGTGCTGGGCACTTGCCTCTAGTCATCT
TTCTTTTATCAAGTCGGCCATGCTACGTTGCTATCTATCGAATTTGTCAT
CATTTCATTTCTCGCTGCCAGTTACGCCCTTAATCTCTTCCATCTGACAT
CCTAATGGAAATGGAGTCCAGCTCTACCCATCTCATTAATGTCTCTCACA
AAGAAATGGCACCATGGAAGTCGGCCTCTAGTTTCTGTCTTTTATGCCTT
GAAATTACGGTAACCCCAGAGTTACTCAGTACATCTCTGACGCGTTCACG
AAATAGCTTCTTCCTACTGGATCACAGTACAGGC back to topCoding sequence (CDS) from alignment at KZ851944.1:57871..60804+ >M747DRAFT_267408-T1 ID=M747DRAFT_267408-T1|Name=M747DRAFT_267408-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6480bp|location=Sequence derived from alignment at KZ851944.1:57871..60804+ (Aspergillus niger ATCC 13496)
ATGGAGATGCCAACTTCGGAGTCTTCCTCGATTCGGGTCGCGTTTGAAGG
ATGTGGCCATGGATGTCTTCATGACATCTATGCGTCAGTCGATAAGGCTG
CTGCTCTCAAGGGCTGGGATGGTGTCGATTTAGTGATCATTGGCGGCGAT
TTCCAGGCCGTCAGAAATGCCAATGACCTGGCCTGCATGTCGGTGCCAAT
GAAGTACAGAGAATTGGGAGACTTTCATGAATACTACAGTGGGCAGCGTG
TTGCTCCCTACCTCACAATCTTTGTTGGCGGGAACCACGAAGCTAGCAAC
CACATGTTTGAACTTTACTATGGAGGGTGGGTAGCCCCGAATATCTACTA
CCTCGGTGCGGCCAACGTCATCCGGTGTGGGCCCCTTCGCATCGCCGGAA
TGTCTGGCATATGGAAGGGATATGACTATCGGAGGCCTCATTTTGAGAGG
CTGCCTTACAATAGTGATGATGTTCAAAGCATCTATCACATCAGAGAACT
CGACGTCCGGAAATTGCTCCAAATCCGTACACAAGTTGATCTGGGATTAT
CCCACGACTGGCCTAAACAGGTCGAGCGTAGCGGAGACTTTGAGACTTTG
TTCAGAAAGAAGCTTGGATTCCGCGAGGATTCCCAGAATGGCCGGCTTGG
TAGCATGGCTGCTAAGCATGTTCTTGATCGGCTGCGCCCAGCCTATTGGT
TCTCGGCACATCTACACGTTAAATTCGCGGCCCTAGTTCAGCATGCCGAG
TATGTTGTTCCTGAGCATCCCGCGGCTAAGAGGCAGGCTGCCACCGCTCC
AACTGATGCCAGTCAGCGTTCAAGCGCTCCACAGGCATTTGCGCTGGATG
GTGCCGTATTCACTTCGCTGGTTCTCGGTGAAGAGAACCCATTGAATGAG
CATATGGCCTCCGCTTCTACTGCAAAGTCTGGTAAGCAAATTGAAAGCCA
CGCTGTAAATACCGGAGATTCTCAGTTGCAGTCGGAGAGTGGACAACCTG
CTCGTCAGCCATCCAAAACTGACGCATCGGCCGGAGAAGCAGCTGGCGAC
ATGGCGACTAAGCTATCAGCGTGGAATAACTTCCACGCCGTTGCTGCCCG
AAATGAAGCGGCTGAGAATGATCTCTATTTGTCGGGCAAGGCACAGAATC
ATGGACCCAACCCTTATGAGATTAAGCACAACCTGACCTGGAAAAGGGTT
GAGACTGACATGGATGGCGTTAATCGAAAGATTGCAAGCGTCGAGAGAGA
AGTTAGCCCTGACCGCCAAAGCAATAAAAAGCAGAAGGTTCAGCATGAGT
CTGAGATAGTGAAGAATAGCGACGAGATCGACCTAGATCTAGACAGTGAC
TCTGATGACGCATCTAGTAAGGCGCAGCCTGAAACAGCAGTTTCAGGAAA
TACTGGCTCTCCCACGCACACGCCTACGACAAACCAAATGGAACGCGATA
ATGGCAACGCCCAAGCAGAACCAGACAAAGCGGCTGATGTCTCGCAGGAT
GTGCGCAACCAGCTGCCTGCCAGCTTCGCACGTCCACAGCCTGATCCGTA
TCCGGTCAATGGCCCCTTGCCCGAGGCAATCTCCAACAAGATGACTAGTT
TTCTTGCACTGGATAAATGCCTACCAAACCGCGAATTTCTCCAGCTCCTT
GAGATCAATCCTATTTCGGACTTAGATGGGGCGAAGGTTGAACGCCCATA
TCGCTTGCAATACGATAAGGAATGGCTGGCAATCACACGTGCGTTTGCCA
ATGACCTTCACCTTGGTGATCCCAACGCCAGACCCTCTGCGGATAAGGGC
GACGTCGTTTACCGACCCCAGATTCTCGAAGAGGAGAAGTGGGTCGAGGA
GAACGTTGTTAAGCCTGGAAAGCTTGTCGTCCCGGAGAACTTCACTCAAA
CGGCGCCCGTCTACGATCCCGCCGTACCTCTGACGACTGAAGAGATGCCA
ATGGAGTACACCAATCCTCAGACCACCGAATTTTGCGAATTGATTGGTAT
TGAAAATAAATTCGACATGAGTGACGCCGAGCGCCAGGCTAGAATGGCTC
GGGGGCCCCGTCCTAATAGCAACAGAGGCGGCATGAACCGTCCTCCTCGT
CGTGGCGGCTTTGGACGGGGTCGCGGACGCGGTGGTCGTGGACGCGGCAA
CCGTTACTGAATGGAGATGCCAACTTCGGAGTCTTCCTCGATTCGGGTCG
CGTTTGAAGGATGTGGCCATGGATGTCTTCATGACATCTATGCGTCAGTC
GATAAGGCTGCTGCTCTCAAGGGCTGGGATGGTGTCGATTTAGTGATCAT
TGGCGGCGATTTCCAGGCCGTCAGAAATGCCAATGACCTGGCCTGCATGT
CGGTGCCAATGAAGTACAGAGAATTGGGAGACTTTCATGAATACTACAGT
GGGCAGCGTGTTGCTCCCTACCTCACAATCTTTGTTGGCGGGAACCACGA
AGCTAGCAACCACATGTTTGAACTTTACTATGGAGGGTGGGTAGCCCCGA
ATATCTACTACCTCGGTGCGGCCAACGTCATCCGGTGTGGGCCCCTTCGC
ATCGCCGGAATGTCTGGCATATGGAAGGGATATGACTATCGGAGGCCTCA
TTTTGAGAGGCTGCCTTACAATAGTGATGATGTTCAAAGCATCTATCACA
TCAGAGAACTCGACGTCCGGAAATTGCTCCAAATCCGTACACAAGTTGAT
CTGGGATTATCCCACGACTGGCCTAAACAGGTCGAGCGTAGCGGAGACTT
TGAGACTTTGTTCAGAAAGAAGCTTGGATTCCGCGAGGATTCCCAGAATG
GCCGGCTTGGTAGCATGGCTGCTAAGCATGTTCTTGATCGGCTGCGCCCA
GCCTATTGGTTCTCGGCACATCTACACGTTAAATTCGCGGCCCTAGTTCA
GCATGCCGAGTATGTTGTTCCTGAGCATCCCGCGGCTAAGAGGCAGGCTG
CCACCGCTCCAACTGATGCCAGTCAGCGTTCAAGCGCTCCACAGGCATTT
GCGCTGGATGGTGCCGTATTCACTTCGCTGGTTCTCGGTGAAGAGAACCC
ATTGAATGAGCATATGGCCTCCGCTTCTACTGCAAAGTCTGGTAAGCAAA
TTGAAAGCCACGCTGTAAATACCGGAGATTCTCAGTTGCAGTCGGAGAGT
GGACAACCTGCTCGTCAGCCATCCAAAACTGACGCATCGGCCGGAGAAGC
AGCTGGCGACATGGCGACTAAGCTATCAGCGTGGAATAACTTCCACGCCG
TTGCTGCCCGAAATGAAGCGGCTGAGAATGATCTCTATTTGTCGGGCAAG
GCACAGAATCATGGACCCAACCCTTATGAGATTAAGCACAACCTGACCTG
GAAAAGGGTTGAGACTGACATGGATGGCGTTAATCGAAAGATTGCAAGCG
TCGAGAGAGAAGTTAGCCCTGACCGCCAAAGCAATAAAAAGCAGAAGGTT
CAGCATGAGTCTGAGATAGTGAAGAATAGCGACGAGATCGACCTAGATCT
AGACAGTGACTCTGATGACGCATCTAGTAAGGCGCAGCCTGAAACAGCAG
TTTCAGGAAATACTGGCTCTCCCACGCACACGCCTACGACAAACCAAATG
GAACGCGATAATGGCAACGCCCAAGCAGAACCAGACAAAGCGGCTGATGT
CTCGCAGGATGTGCGCAACCAGCTGCCTGCCAGCTTCGCACGTCCACAGC
CTGATCCGTATCCGGTCAATGGCCCCTTGCCCGAGGCAATCTCCAACAAG
ATGACTAGTTTTCTTGCACTGGATAAATGCCTACCAAACCGCGAATTTCT
CCAGCTCCTTGAGATCAATCCTATTTCGGACTTAGATGGGGCGAAGGTTG
AACGCCCATATCGCTTGCAATACGATAAGGAATGGCTGGCAATCACACGT
GCGTTTGCCAATGACCTTCACCTTGGTGATCCCAACGCCAGACCCTCTGC
GGATAAGGGCGACGTCGTTTACCGACCCCAGATTCTCGAAGAGGAGAAGT
GGGTCGAGGAGAACGTTGTTAAGCCTGGAAAGCTTGTCGTCCCGGAGAAC
TTCACTCAAACGGCGCCCGTCTACGATCCCGCCGTACCTCTGACGACTGA
AGAGATGCCAATGGAGTACACCAATCCTCAGACCACCGAATTTTGCGAAT
TGATTGGTATTGAAAATAAATTCGACATGAGTGACGCCGAGCGCCAGGCT
AGAATGGCTCGGGGGCCCCGTCCTAATAGCAACAGAGGCGGCATGAACCG
TCCTCCTCGTCGTGGCGGCTTTGGACGGGGTCGCGGACGCGGTGGTCGTG
GACGCGGCAACCGTTACTGAATGGAGATGCCAACTTCGGAGTCTTCCTCG
ATTCGGGTCGCGTTTGAAGGATGTGGCCATGGATGTCTTCATGACATCTA
TGCGTCAGTCGATAAGGCTGCTGCTCTCAAGGGCTGGGATGGTGTCGATT
TAGTGATCATTGGCGGCGATTTCCAGGCCGTCAGAAATGCCAATGACCTG
GCCTGCATGTCGGTGCCAATGAAGTACAGAGAATTGGGAGACTTTCATGA
ATACTACAGTGGGCAGCGTGTTGCTCCCTACCTCACAATCTTTGTTGGCG
GGAACCACGAAGCTAGCAACCACATGTTTGAACTTTACTATGGAGGGTGG
GTAGCCCCGAATATCTACTACCTCGGTGCGGCCAACGTCATCCGGTGTGG
GCCCCTTCGCATCGCCGGAATGTCTGGCATATGGAAGGGATATGACTATC
GGAGGCCTCATTTTGAGAGGCTGCCTTACAATAGTGATGATGTTCAAAGC
ATCTATCACATCAGAGAACTCGACGTCCGGAAATTGCTCCAAATCCGTAC
ACAAGTTGATCTGGGATTATCCCACGACTGGCCTAAACAGGTCGAGCGTA
GCGGAGACTTTGAGACTTTGTTCAGAAAGAAGCTTGGATTCCGCGAGGAT
TCCCAGAATGGCCGGCTTGGTAGCATGGCTGCTAAGCATGTTCTTGATCG
GCTGCGCCCAGCCTATTGGTTCTCGGCACATCTACACGTTAAATTCGCGG
CCCTAGTTCAGCATGCCGAGTATGTTGTTCCTGAGCATCCCGCGGCTAAG
AGGCAGGCTGCCACCGCTCCAACTGATGCCAGTCAGCGTTCAAGCGCTCC
ACAGGCATTTGCGCTGGATGGTGCCGTATTCACTTCGCTGGTTCTCGGTG
AAGAGAACCCATTGAATGAGCATATGGCCTCCGCTTCTACTGCAAAGTCT
GGTAAGCAAATTGAAAGCCACGCTGTAAATACCGGAGATTCTCAGTTGCA
GTCGGAGAGTGGACAACCTGCTCGTCAGCCATCCAAAACTGACGCATCGG
CCGGAGAAGCAGCTGGCGACATGGCGACTAAGCTATCAGCGTGGAATAAC
TTCCACGCCGTTGCTGCCCGAAATGAAGCGGCTGAGAATGATCTCTATTT
GTCGGGCAAGGCACAGAATCATGGACCCAACCCTTATGAGATTAAGCACA
ACCTGACCTGGAAAAGGGTTGAGACTGACATGGATGGCGTTAATCGAAAG
ATTGCAAGCGTCGAGAGAGAAGTTAGCCCTGACCGCCAAAGCAATAAAAA
GCAGAAGGTTCAGCATGAGTCTGAGATAGTGAAGAATAGCGACGAGATCG
ACCTAGATCTAGACAGTGACTCTGATGACGCATCTAGTAAGGCGCAGCCT
GAAACAGCAGTTTCAGGAAATACTGGCTCTCCCACGCACACGCCTACGAC
AAACCAAATGGAACGCGATAATGGCAACGCCCAAGCAGAACCAGACAAAG
CGGCTGATGTCTCGCAGGATGTGCGCAACCAGCTGCCTGCCAGCTTCGCA
CGTCCACAGCCTGATCCGTATCCGGTCAATGGCCCCTTGCCCGAGGCAAT
CTCCAACAAGATGACTAGTTTTCTTGCACTGGATAAATGCCTACCAAACC
GCGAATTTCTCCAGCTCCTTGAGATCAATCCTATTTCGGACTTAGATGGG
GCGAAGGTTGAACGCCCATATCGCTTGCAATACGATAAGGAATGGCTGGC
AATCACACGTGCGTTTGCCAATGACCTTCACCTTGGTGATCCCAACGCCA
GACCCTCTGCGGATAAGGGCGACGTCGTTTACCGACCCCAGATTCTCGAA
GAGGAGAAGTGGGTCGAGGAGAACGTTGTTAAGCCTGGAAAGCTTGTCGT
CCCGGAGAACTTCACTCAAACGGCGCCCGTCTACGATCCCGCCGTACCTC
TGACGACTGAAGAGATGCCAATGGAGTACACCAATCCTCAGACCACCGAA
TTTTGCGAATTGATTGGTATTGAAAATAAATTCGACATGAGTGACGCCGA
GCGCCAGGCTAGAATGGCTCGGGGGCCCCGTCCTAATAGCAACAGAGGCG
GCATGAACCGTCCTCCTCGTCGTGGCGGCTTTGGACGGGGTCGCGGACGC
GGTGGTCGTGGACGCGGCAACCGTTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262LI4 |
| DBxref | InterPro:IPR041816 |
| DBxref | InterPro:IPR004843 |
| DBxref | InterPro:IPR007708 |
| DBxref | PFAM:PF00149 |
| DBxref | PFAM:PF05011 |
| Product | RNA lariat debranching enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851944.1 | supercontig | KZ851944.1:57871..60804 + |
|
