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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851944.1:130379..131854+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_267470-T1 ID=M747DRAFT_267470-T1|Name=M747DRAFT_267470-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1476bp|location=Sequence derived from alignment at KZ851944.1:130379..131854+ (Aspergillus niger ATCC 13496)
AATTGTTGTTTTTTATGCTACATTCTTGCTCTACTTCTTTTGGCAGGATA
AAATCTGCGAGTTTGAAAATCTTTATCATTTTAGATTCGCGACTTTAGTA
TCCCAGCCAACCAGCAGCACAAGAACAAACAAATCAAAGCCGACGACCTT
CGAATCTCCGCAGGATCGCCGCCGACAGAAACGCATCCCGTCACTTCTCC
TACCTTTCTACATTTACTCGGTCGCAGATCCCAAACATGATGATGGAAGA
CGAAGATGATGATTTTTATGACCCCGCCGATGCGGTGCCTGTAACTCAGC
ATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAGGACCCCACGACGCC
AATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAAGATGAGGTATGCGC
ATGGCGACAACTAATCTATCCTGTTACTGTCGCTAACTCTCGCATAGGAT
GACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCCTCCGGAAGT
GTAAGTCCGCTACCTCTGCTCGACGCATTTCACCTTGTTAATTTATTGAA
CAGCCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCT
CCTCTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACC
CCCAAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGT
CCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCG
ATGTCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCA
ACAGACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCC
AGGCTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGT
GGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGAT
CAGAAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCC
GCCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCAC
CGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATG
ATGCAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATC
CATGGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGAC
AACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAA
GGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCG
CGGGAGAAGGTGGTAAAGCTAAGGTGGATCCGAAACTGCGACCATGTTAT
AATATCGAATACCTTGTCGAAATCTCAGCATTGGTGGTTTAAGCGGAGTC
CTAGAATCAGTAGTAAACCTATCCATAAATGAATTACTCCCGAAGGCTAA
GCTTCTTGTGCGGATCTGGGGTCGGG back to topCoding sequence (CDS) from alignment at KZ851944.1:130379..131854+ >M747DRAFT_267470-T1 ID=M747DRAFT_267470-T1|Name=M747DRAFT_267470-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2916bp|location=Sequence derived from alignment at KZ851944.1:130379..131854+ (Aspergillus niger ATCC 13496)
ATGATGATGGAAGACGAAGATGATGATTTTTATGACCCCGCCGATGCGGT
GCCTGTAACTCAGCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAG
GACCCCACGACGCCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAA
GATGAGGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCC
TCCGGAAGTCCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAA
GACCCTCCTCTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACC
GTTACCCCCAAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCC
TACGGTCCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGA
ATATCGATGTCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATC
ATGTCAACAGACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAG
GCGGCCAGGCTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGT
TCACGTGGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATT
GGAGATCAGAAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGG
GCTCCCGCCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAA
GCGCACCGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAA
GAGATGATGCAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCC
CTCATCCATGGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGG
GTGGACAACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGT
GGGCAAGGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCG
GGGTCGCGGGAGAAGGTGGTAAATGATGATGGAAGACGAAGATGATGATT
TTTATGACCCCGCCGATGCGGTGCCTGTAACTCAGCATCAAAACGGGTCT
CAGCATCCCCAGGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGA
GGAGGAGATAGAGGTGGAAGAAGATGAGGATGACTTCAATATTATTACCG
AAGCACCAGCAGACGCACCCCCTCCGGAAGTCCCACATCCTCGTCACGCC
AGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAGATGTCTCTACGAT
ATCAAAATCAATAACACCCACCGTTACCCCCAAACTTGAATCTGCTACCC
CTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAAGCCCGGTTCCGCC
TACCCTCCAGTCCATGCGTCGAATATCGATGTCCACGCGAACCCTATCCA
TCCGGCGACCGGTAAACCAATCATGTCAACAGACATGGACACCGACTTCC
CAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGACATTACGGATTAT
TTCAACTACGGGTTTGACGAGTTCACGTGGGCCAGCTATGTGTTGAAGCA
ACAGGAGCTACGCAAGGAAATTGGAGATCAGAAGAAACAATTGGATGATA
TGCAAGCCTTCTTAAGCATGGGGCTCCCGCCAATGCCCGGAGGTCCTCCG
GGACCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTATGCCCGGCATGCC
TGGGATGCCGGATATGTCACAAGAGATGATGCAAGGCATGCTGACGAGCA
TGATGTCACAAGGCCTGGACCCCTCATCCATGGATCCTATGGCATTTATG
CAGCATGCGCAGGCCATGATGGGTGGACAACCCGGCGCAGGCGGCGGACA
ACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGCCAGCCTCAGATGG
GATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAGGTGGTAAATGATG
ATGGAAGACGAAGATGATGATTTTTATGACCCCGCCGATGCGGTGCCTGT
AACTCAGCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAGGACCCC
ACGACGCCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAAGATGAG
GATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCCTCCGGA
AGTCCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCT
CCTCTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACC
CCCAAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGT
CCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCG
ATGTCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCA
ACAGACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCC
AGGCTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGT
GGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGAT
CAGAAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCC
GCCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCAC
CGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATG
ATGCAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATC
CATGGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGAC
AACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAA
GGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCG
CGGGAGAAGGTGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OAU |
| DBxref | InterPro:IPR007854 |
| DBxref | PFAM:PF05182 |
| Product | cleavage polyadenylation factor subunit fip1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851944.1 | supercontig | KZ851944.1:130379..131854 + |
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