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M747DRAFT_267486-T1, M747DRAFT_267486-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_267486-T1
Unique NameM747DRAFT_267486-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:144982..146368+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_267486-T1 ID=M747DRAFT_267486-T1|Name=M747DRAFT_267486-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1387bp|location=Sequence derived from alignment at KZ851944.1:144982..146368+ (Aspergillus niger ATCC 13496)
ATTGAACTCATTGAAGGTTCAAGCAAGAAATCATGGCGTCAAGTAAGTCG
CGAATTGTTTCCATGGCAATCCTCTTCCACTGACTAGTGTTAGATCAATT
CTCTGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGTTCTCGC
CCGACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAGAACGTG
TATCTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGGCAAGCT
GTTACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCG
CAACCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTCAAGAAG
TGAGTCCATGTCTGTTCTGTTTGGGCTTCGGTAGCAACCAGCGCATAACC
AACCTATTCCCTGCTGACAATAAACAGAATTGATGTAGCATCATCCACCC
AGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGC
GAGGAACACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGT
GCACCCGACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCT
CGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATG
GCTTCCCGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGCTCAC
CGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGC
AGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATG
CCCGACGATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGT
CGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCA
AGTGTCACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAAT
GCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGA
TGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGT
ATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGA
AAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGA
TGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGG
AGGCGAAGGGGAAGGGCGCCAAATAAGTTTGAGCATATTGTCGCCTTATG
AAACTAACTTACTTTGTCTTGATGACCGGCGTGCGGAGACTGGTGTTCTT
GTTCTTACTTTTGGTTCTTGATATCACAGTTACGAGGCACCAGGTTATAG
AAAGCGTAAAATAGTCCGATTCGTGCTAACAGTCTAC
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Coding sequence (CDS) from alignment at KZ851944.1:144982..146368+

>M747DRAFT_267486-T1 ID=M747DRAFT_267486-T1|Name=M747DRAFT_267486-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3195bp|location=Sequence derived from alignment at KZ851944.1:144982..146368+ (Aspergillus niger ATCC 13496)
ATGGCGTCAAATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTC
CGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTT
CCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTACC
GTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTT
GGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGG
ATTGGGACGTCAAGAAAATTGATGTAGCATCATCCACCCAGACCGTCCTC
AGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGCGAGGAACACAA
CCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGTGCACCCGACGA
ACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTC
TCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGC
CCTACACATCTACGATCTGAAAGCATTGGCTATGCTCACCGCTCAGTCGG
AGGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGCAGCGAAGGGAG
AGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATGCCCGACGATGC
AGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCG
ATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCAAGTGTCACAGA
CAGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAATGCGCTTGCGTT
CCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTG
CGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGTATCAGAAGTAT
CCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGAAAGTACCTGGC
GATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGATGTTGTCGAAG
GGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGG
AAGGGCGCCAAATAAATGGCGTCAAATCAATTCTCTGTCGCATCCCCGCC
GACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGC
GAATCGTTGTTTCTTCCTGGGATAAGAACGTGTATCTGTACGACTTGCGC
GATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCA
TCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCT
ACACGGCTGGCTTGGATTGGGACGTCAAGAAAATTGATGTAGCATCATCC
ACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTT
CAGCGAGGAACACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGC
ATGTGCACCCGACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTC
CCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGC
AATGGCTTCCCGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGC
TCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCC
TGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATG
CATGCCCGACGATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCG
CGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCC
TTCAAGTGTCACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGT
CAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTG
GTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGA
CAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAA
CGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAG
ATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAG
ACGGAGGCGAAGGGGAAGGGCGCCAAATAAATGGCGTCAAATCAATTCTC
TGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCG
ACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAGAACGTGTAT
CTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTT
ACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAA
CCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTCAAGAAAATT
GATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGT
TCGAAGCGTCGTTTTCAGCGAGGAACACAACCTAGTAATATCCGCCTCTT
GGGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCC
GCTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTAC
GAAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGA
AAGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAG
ATTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGAC
TCGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCA
TCGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAA
GCCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGA
CGTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGT
TTGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCG
AAGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGT
GGACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCT
TCGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTA
CGTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_267486M747DRAFT_267486Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_267486-T1M747DRAFT_267486-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_267486-T1.utr5p1M747DRAFT_267486-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_267486-T1.exon1M747DRAFT_267486-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_267486-T1.exon2M747DRAFT_267486-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_267486-T1.exon3M747DRAFT_267486-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_267486-T1.cdsM747DRAFT_267486-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_267486-T1.utr3p1M747DRAFT_267486-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Productnuclear pore complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:144982..146368 +
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