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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851945.1:69867..71313+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_267627-T1 ID=M747DRAFT_267627-T1|Name=M747DRAFT_267627-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1447bp|location=Sequence derived from alignment at KZ851945.1:69867..71313+ (Aspergillus niger ATCC 13496)
CCCCCCCAGCAGTCTCCATAACCCAGTCCATCACGTGTACACTTTCTATC
CTGAATAACTTGAACAGCTGAGTCTTTATTCGCGCCTTACCGAGATTTCG
CAGACAGATCGAGACACGACTTTTCATCCGCGCTGCGAGCAAGCCTTGTC
GGCTCTCGACAAAGCAACATCAACATCAACATCACCCATCACACCATTTC
TTAACACAAACACATCATGTCCTCACCACCACCACCGTCCTCAAACCCCC
TCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAACCACTCGGCAGCCAT
CCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACCTCCTTCCCGAACAC
CATCGACGCAGACACGCGCACCTACAGCGATGCCGGCAGCGTGACGGGCA
GCTTTACAGGCAGTCTGGGCGGGACCAGCGCAGATGGGGTGTTCCTAACG
AAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAG
GGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACTGGGGTCGGTGGATG
TGGATGGCGCGTCAGTGAGGGGTGGTGCTTCTGGCGGTGCCGGAGGAGGA
GGGGGAGGAGAAGATGCAGATGAGGATGAGGATTTTGATGATGAGGGGGA
GTTGTTGGGGAGGGAAGAGGGGACGACGGATACGGAGGCGGAGAAGAAGA
ATATGGCGTATGCATCCCTCCTTTTGGACGACTCTATATCTGGCTTGTGG
GCGAAGTTGCTAACTGGTTCTGGTGTAGGTTGTTGGTGGATGCATTCAAT
CCCATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAATTACGAAA
GGAGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGG
CTAGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGCGGGTGAG
ATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGGCTATCGCTCATGA
TCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCGACGACAACAACAA
CGACAACCACAACACCTGGGGGTATTAAGCAGGAGCCCATGGAAAGGGGG
CCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTCCGAATCC
CCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTGCGGCGGT
ATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCTGAGTATG
GGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTAGTGTTGG
CGGACGGCGCATCTTCCGGTAATGGAATATGGATCTGGTTATGGTAAAGC
TGGGAGCGCAGAGGTGAGCGTGGATAGCAAAATGGTGGCTGAAATACTGA
GAAAGACCACTGCAGTAATGATAGTATCATAATAAATGATGATAGAC back to topCoding sequence (CDS) from alignment at KZ851945.1:69867..71313+ >M747DRAFT_267627-T1 ID=M747DRAFT_267627-T1|Name=M747DRAFT_267627-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2070bp|location=Sequence derived from alignment at KZ851945.1:69867..71313+ (Aspergillus niger ATCC 13496)
ATGTCCTCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCTCCAT
CTCCTCGGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCGCGCA
TGCACCCCCTCCGCCAGACCTCCTTCCCGAACACCATCGACGCAGACACG
CGCACCTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGCAGTCT
GGGCGGGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCG
GCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAGGGAAGAAGGGAGTTTG
CGGGCGGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGT
GAGGGGTGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATG
CAGATGAGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAA
GAGGGGACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTTGTTGGT
GGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGTTCAAACGAG
CCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCATGCGCTGTCG
CAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTTTACGAAGGT
GTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGG
CTATCGCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCG
ACGACAACAACAACGACAACCACAACACCTGGGGGTATTAAGCAGGAGCC
CATGGAAAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGC
TGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAA
GCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTC
GGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGG
CGGGTAGTGTTGGCGGACGGCGCATCTTCCGGTAAATGTCCTCACCACCA
CCACCGTCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTC
TCAACCACTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCC
AGACCTCCTTCCCGAACACCATCGACGCAGACACGCGCACCTACAGCGAT
GCCGGCAGCGTGACGGGCAGCTTTACAGGCAGTCTGGGCGGGACCAGCGC
AGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAG
CGGAGAAGGAGCGCGAGAGGGAAGAAGGGAGTTTGCGGGCGGGAATGGAT
CGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGGTGGTGCTTC
TGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATGAGGATGAGG
ATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGGACGACGGAT
ACGGAGGCGGAGAAGAAGAATATGGCGTTGTTGGTGGATGCATTCAATCC
CATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAATTACGAAAGG
AGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCT
AGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGAT
TATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGGCTATCGCTCATGATC
AGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCGACGACAACAACAACG
ACAACCACAACACCTGGGGGTATTAAGCAGGAGCCCATGGAAAGGGGGCC
CATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTCCGAATCCCC
ATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTGCGGCGGTAT
AAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCTGAGTATGGG
CAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTAGTGTTGGCG
GACGGCGCATCTTCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519451.1 |
| Note | BUSCO:EOG09264VRO |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR006809 |
| DBxref | PFAM:PF04719 |
| Product | transcription initiation factor TFIID subunit beta |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851945.1 | supercontig | KZ851945.1:69867..71313 + |
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