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M747DRAFT_271483-T1, M747DRAFT_271483-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_271483-T1
Unique NameM747DRAFT_271483-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1026022..1027291-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_271483-T1 ID=M747DRAFT_271483-T1|Name=M747DRAFT_271483-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1270bp|location=Sequence derived from alignment at KZ851899.1:1026022..1027291- (Aspergillus niger ATCC 13496)
CATGATTCAGACGTGGCTGCTCGGCTGAAGCTAGCCCGAGGGCATTCCCC
GCATTGCTGCTGAAGCTCGACACGAGGGGTGATCCATCCCACCTTATAGA
CACCAGCATCACCAGAGTGTAGCACAATCAACAACTCCATCAGTAATACC
ACTCAAGTCCTCATCTCTCATCATGGCTTCTACATCTCCTCCCGCTGTCC
GATCCAAAATTGACCTTCTCATCACCAACCTCGTCAACATCCAAGACAAA
ACCGGTCAATTCCTCCTCCCCCTCGCCGATGGCCGCATCATCGACACCAA
GTCCTGGCATGGCTGGGAATGGACGCATGGAATCGGCCTCTATGGCATCT
GGAAGTACTACGAAATGACCGGCTCTCCCCACCTCCTGCAGATTATTGAG
GATTGGTTCGCCGCCCGCTTCGCTGAAGGCGGTACCACTAAGAACATCAA
CACCATGGCCGTCTTCCTTACTCTGGCATACGTATACGAGAAGACGCAAA
ACCCTGTCTACCTGCCCTGGCTGGACGCATGGGCCGAATGGGCTATGCAT
GAACTCCCACGCACCAAGCAGGGAGGGATGCAGCACGCCACATACCTCAC
GGAAAATTACCAGCAGTTGTGGGATGATACGTTGATGATGACCGTGATGC
CGTTGGCAAAGATTGGAAAGTTGCTGAATCGGCCGGATTATGTGGAGGAG
GCCAAGCGTCAGACGTTGGTGCACGTCAAGTACTTGGTTGATACGAGCAC
CGGGCTGTGGTTTCATGGCTGGACGTTCGAGGATGGTGGACATAACTTTG
CTAGAGCGAGGTGGGCGCGCGGTAATAGTTGGGTGACTATGGTTATTCCA
GAGTTTATTGAGTTATTGGATTTGAAGGAGGGGGATCCTATTCGCCTGTT
CTTGTTGGATACGTTAGAGGCCCAATGCGAGGCTCTCATGGGCCTGCAGG
AGGAATCGGGCTTTTGGCACACCCTTCTTGACCATCCTGATTCATACGTC
GAGGCCTCCGCCACAGCAGGATTCGCATATGGTATCCTTAAGGCTGTTAG
GAAGAGGTATCTGCCAAAGAAGTATCGGGTAGTCGCAGAGAAGGCCATTC
AGGCAGTGTTGAGCGCCGTTGACGAGACCGGAGAACTGCAGCAGACGAGC
TTTGGTACCGGCATGGGGGATTCTCTGGACTTCTATAAGAAGATTCCCTT
GACAGCCATGCCATATGGGCAGGCCATGGCCATCATGGCGCTGGGCGAGT
ATCTCCGGGGACACCTATAG
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Coding sequence (CDS) from alignment at KZ851899.1:1026022..1027291-

>M747DRAFT_271483-T1 ID=M747DRAFT_271483-T1|Name=M747DRAFT_271483-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1098bp|location=Sequence derived from alignment at KZ851899.1:1026022..1027291- (Aspergillus niger ATCC 13496)
ATGGCTTCTACATCTCCTCCCGCTGTCCGATCCAAAATTGACCTTCTCAT
CACCAACCTCGTCAACATCCAAGACAAAACCGGTCAATTCCTCCTCCCCC
TCGCCGATGGCCGCATCATCGACACCAAGTCCTGGCATGGCTGGGAATGG
ACGCATGGAATCGGCCTCTATGGCATCTGGAAGTACTACGAAATGACCGG
CTCTCCCCACCTCCTGCAGATTATTGAGGATTGGTTCGCCGCCCGCTTCG
CTGAAGGCGGTACCACTAAGAACATCAACACCATGGCCGTCTTCCTTACT
CTGGCATACGTATACGAGAAGACGCAAAACCCTGTCTACCTGCCCTGGCT
GGACGCATGGGCCGAATGGGCTATGCATGAACTCCCACGCACCAAGCAGG
GAGGGATGCAGCACGCCACATACCTCACGGAAAATTACCAGCAGTTGTGG
GATGATACGTTGATGATGACCGTGATGCCGTTGGCAAAGATTGGAAAGTT
GCTGAATCGGCCGGATTATGTGGAGGAGGCCAAGCGTCAGACGTTGGTGC
ACGTCAAGTACTTGGTTGATACGAGCACCGGGCTGTGGTTTCATGGCTGG
ACGTTCGAGGATGGTGGACATAACTTTGCTAGAGCGAGGTGGGCGCGCGG
TAATAGTTGGGTGACTATGGTTATTCCAGAGTTTATTGAGTTATTGGATT
TGAAGGAGGGGGATCCTATTCGCCTGTTCTTGTTGGATACGTTAGAGGCC
CAATGCGAGGCTCTCATGGGCCTGCAGGAGGAATCGGGCTTTTGGCACAC
CCTTCTTGACCATCCTGATTCATACGTCGAGGCCTCCGCCACAGCAGGAT
TCGCATATGGTATCCTTAAGGCTGTTAGGAAGAGGTATCTGCCAAAGAAG
TATCGGGTAGTCGCAGAGAAGGCCATTCAGGCAGTGTTGAGCGCCGTTGA
CGAGACCGGAGAACTGCAGCAGACGAGCTTTGGTACCGGCATGGGGGATT
CTCTGGACTTCTATAAGAAGATTCCCTTGACAGCCATGCCATATGGGCAG
GCCATGGCCATCATGGCGCTGGGCGAGTATCTCCGGGGACACCTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_271483M747DRAFT_271483Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271483-T1.cdsM747DRAFT_271483-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271483-T1.exon1M747DRAFT_271483-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271483-T1.utr5p1M747DRAFT_271483-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271483-T1M747DRAFT_271483-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteCAZy:GH105
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR012341
DBxrefInterPro:IPR010905
DBxrefPFAM:PF07470
Productunsaturated rhamnogalacturonan hydrolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1026022..1027291 -
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