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M747DRAFT_271805-T1, M747DRAFT_271805-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_271805-T1
Unique NameM747DRAFT_271805-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1643435..1644832+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_271805-T1 ID=M747DRAFT_271805-T1|Name=M747DRAFT_271805-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1398bp|location=Sequence derived from alignment at KZ851899.1:1643435..1644832+ (Aspergillus niger ATCC 13496)
ATCTGGTTATTACTTCCCCCTCTTTGCTAGATCTGCTCCGTATCATTTAT
CGAGAGTCTTCGTGCCCAAATTGGCATTATGCTATTTTCATCATTGCGCT
CTCTCTCTCACCGGGGCCCCTCACTGGCCTCGCGGGCCTTCAGCACCTCC
CCCGCCGTCCATGCCGCCGAGGTTAAGTCGCTGGGTGTGATAGGAGCTGG
GCAGATGGTCAGTGTGTTCCTGACAATATGATGTTCCCTCCAGTGAGAGA
AACAGGGCAACTAAGATTCTATAGGGATTAGGAATTGCTCTAGTAGCTGC
CCAGAAAGCCCAAGTCCCGGTGACCCTAATCGACAACTCCCAAGCATCCA
TCGACAAGGGCCTCAAGTTTGCCGGTACACAGCACCCACTCTTCTTCTCT
CCCTCACCATCTTTCCAATTTCATTTAACTAAACAACTACATTCTTCCAG
ACAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCACCCGGGACGCC
GCCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAATGGACGACCT
CTCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATCCCCGACCTCA
AGACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAAGCACGCCATC
CTCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCGCAGCCGCCAC
CACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTCATCTCCACGC
ATTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGATCATCGCAGGC
TTGCAGACTTCCCAGGCCACGAAAGATACCGCCATCGCTTTCGTCCAGCG
CATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGTTTCCTGGCGA
ACCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTGTCTGGAGACG
GGCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGACGGGCACAAA
TGTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGTCTGGATACTT
GTCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGATAGTAAGTAT
CGGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGTGGCTGGGCAA
GAAGTCTGGAAAGGGTTTCTATGATTACTGATTGATTGATCGATTCAATC
ATCTCTGTATCTATCCAAGCGAACGTTGCGATATCCCTCCCTTATATACT
GTGATGTCTTAGAAATTATGTACCCCGTTTTGGTGTCTTATTGATGACTT
GTTTTGGCCTGCATGTAGACTACATTTAGCTTCCGGTGACCGAGAAGTAG
TCATACTGCATGCAGCAGACCTCACACATGGAAATCACGTCATTGTAC
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Coding sequence (CDS) from alignment at KZ851899.1:1643435..1644832+

>M747DRAFT_271805-T1 ID=M747DRAFT_271805-T1|Name=M747DRAFT_271805-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2880bp|location=Sequence derived from alignment at KZ851899.1:1643435..1644832+ (Aspergillus niger ATCC 13496)
ATGCTATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCCCCTCACTGGC
CTCGCGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCCGAGGTTAAGT
CGCTGGGTGTGATAGGAGCTGGGCAGATGGGATTAGGAATTGCTCTAGTA
GCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTAATCGACAACTCCCAAGC
ATCCATCGACAAGGGCCTCAAGTTTGCCGACAAACTCCTCGATAAAGATG
TATCAAAAGAACGCCTCACCCGGGACGCCGCCGATGCCGCCCGGGCACGC
ATCACCCCAAGCCTGAAAATGGACGACCTCTCCAGCGTCGACTTCGTCAT
CGAAGCCGTCCCCGAGATCCCCGACCTCAAGACCTCTATCTTCTCAAAAC
TCGCCCAAATTGCCCCTAAGCACGCCATCCTCGCTACTAACACCTCCTCC
ATCTCCATCACCAAGATCGCAGCCGCCACCACAACAGACCCCACGGACCT
GCAGGCCCCCTCGCGTGTCATCTCCACGCATTTCATGAACCCCGTCCCCG
TGCAAAAGGGCGTAGAGATCATCGCAGGCTTGCAGACTTCCCAGGCCACG
AAAGATACCGCCATCGCTTTCGTCCAGCGCATGGGCAAAGTCGCTTCTGT
TTCTGCGGATTCGCCTGGTTTCCTGGCGAACCGAATCCTCATGCCGTATA
TAAATGAGGCCATCATCTGTCTGGAGACGGGCGTTGGTGGCCGTGAGGAT
ATTGATAATATCATGAAGACGGGCACAAATGTGCCTATGGGTCCGTTGGT
GTTGGCGGATTTTATTGGTCTGGATACTTGTCTCGCCATTATGAATGTCT
TGCACCAGGAGACTGGTGATAGTAAGTATCGGCCGTCCGGGCTATTGAAG
CGTATGGTTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAAAGGGTTTCTA
TGATTACTGAATGCTATTTTCATCATTGCGCTCTCTCTCTCACCGGGGCC
CCTCACTGGCCTCGCGGGCCTTCAGCACCTCCCCCGCCGTCCATGCCGCC
GAGGTTAAGTCGCTGGGTGTGATAGGAGCTGGGCAGATGGGATTAGGAAT
TGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACCCTAATCGACA
ACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGACAAACTCCTC
GATAAAGATGTATCAAAAGAACGCCTCACCCGGGACGCCGCCGATGCCGC
CCGGGCACGCATCACCCCAAGCCTGAAAATGGACGACCTCTCCAGCGTCG
ACTTCGTCATCGAAGCCGTCCCCGAGATCCCCGACCTCAAGACCTCTATC
TTCTCAAAACTCGCCCAAATTGCCCCTAAGCACGCCATCCTCGCTACTAA
CACCTCCTCCATCTCCATCACCAAGATCGCAGCCGCCACCACAACAGACC
CCACGGACCTGCAGGCCCCCTCGCGTGTCATCTCCACGCATTTCATGAAC
CCCGTCCCCGTGCAAAAGGGCGTAGAGATCATCGCAGGCTTGCAGACTTC
CCAGGCCACGAAAGATACCGCCATCGCTTTCGTCCAGCGCATGGGCAAAG
TCGCTTCTGTTTCTGCGGATTCGCCTGGTTTCCTGGCGAACCGAATCCTC
ATGCCGTATATAAATGAGGCCATCATCTGTCTGGAGACGGGCGTTGGTGG
CCGTGAGGATATTGATAATATCATGAAGACGGGCACAAATGTGCCTATGG
GTCCGTTGGTGTTGGCGGATTTTATTGGTCTGGATACTTGTCTCGCCATT
ATGAATGTCTTGCACCAGGAGACTGGTGATAGTAAGTATCGGCCGTCCGG
GCTATTGAAGCGTATGGTTGATGCTGGGTGGCTGGGCAAGAAGTCTGGAA
AGGGTTTCTATGATTACTGAATGCTATTTTCATCATTGCGCTCTCTCTCT
CACCGGGGCCCCTCACTGGCCTCGCGGGCCTTCAGCACCTCCCCCGCCGT
CCATGCCGCCGAGGTTAAGTCGCTGGGTGTGATAGGAGCTGGGCAGATGG
GATTAGGAATTGCTCTAGTAGCTGCCCAGAAAGCCCAAGTCCCGGTGACC
CTAATCGACAACTCCCAAGCATCCATCGACAAGGGCCTCAAGTTTGCCGA
CAAACTCCTCGATAAAGATGTATCAAAAGAACGCCTCACCCGGGACGCCG
CCGATGCCGCCCGGGCACGCATCACCCCAAGCCTGAAAATGGACGACCTC
TCCAGCGTCGACTTCGTCATCGAAGCCGTCCCCGAGATCCCCGACCTCAA
GACCTCTATCTTCTCAAAACTCGCCCAAATTGCCCCTAAGCACGCCATCC
TCGCTACTAACACCTCCTCCATCTCCATCACCAAGATCGCAGCCGCCACC
ACAACAGACCCCACGGACCTGCAGGCCCCCTCGCGTGTCATCTCCACGCA
TTTCATGAACCCCGTCCCCGTGCAAAAGGGCGTAGAGATCATCGCAGGCT
TGCAGACTTCCCAGGCCACGAAAGATACCGCCATCGCTTTCGTCCAGCGC
ATGGGCAAAGTCGCTTCTGTTTCTGCGGATTCGCCTGGTTTCCTGGCGAA
CCGAATCCTCATGCCGTATATAAATGAGGCCATCATCTGTCTGGAGACGG
GCGTTGGTGGCCGTGAGGATATTGATAATATCATGAAGACGGGCACAAAT
GTGCCTATGGGTCCGTTGGTGTTGGCGGATTTTATTGGTCTGGATACTTG
TCTCGCCATTATGAATGTCTTGCACCAGGAGACTGGTGATAGTAAGTATC
GGCCGTCCGGGCTATTGAAGCGTATGGTTGATGCTGGGTGGCTGGGCAAG
AAGTCTGGAAAGGGTTTCTATGATTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_271805M747DRAFT_271805Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271805-T1M747DRAFT_271805-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271805-T1.utr5p1M747DRAFT_271805-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271805-T1.exon1M747DRAFT_271805-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_271805-T1.exon2M747DRAFT_271805-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_271805-T1.exon3M747DRAFT_271805-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271805-T1.cdsM747DRAFT_271805-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_271805-T1.utr3p1M747DRAFT_271805-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006180
DBxrefInterPro:IPR022694
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR006176
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Product3-hydroxybutyryl-CoA dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1643435..1644832 +
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