You are here

Home

M747DRAFT_272071-T1, M747DRAFT_272071-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_272071-T1
Unique NameM747DRAFT_272071-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:375189..376241-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_272071-T1 ID=M747DRAFT_272071-T1|Name=M747DRAFT_272071-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1053bp|location=Sequence derived from alignment at KZ851900.1:375189..376241- (Aspergillus niger ATCC 13496)
CCTCCACTTTCTCTTCGTTCTTTTCTTTCTTTCTTCACTACTATTCCTCA
GATCGGACCCTCCCACCATGTCTCACTCTCACTCCCACGACAACGATGTC
AGCCATTCCCACGATGACTTCGGTGGTCACGGCCACTCCCATGAGATCCT
CGACGGTCCCGGTTCATACATAAACCGTGAGATGCCTCTCTCGGAGGAGC
GTGACTGGAAGGACCGTGCCTTTACCATTGGCATTGGAGGGTAAGTCACA
GCAATCATACTATTACTTATTATCCTCGCCTTCCATCTAACTCACCCATG
TAGACCCGTCGGATCGGGCAAAACTGCCCTCATGCTGGCCCTCTGCCAGG
CCCTCCGCGACGAGTACAACATCGCCGCCGTCACCAACGACATCTTCACC
AGGTATACAACCCCTCCCCCCCTCCACCGCTTTTCCCCCATACCAAAAGT
AATCAGCTAACCCAATACTTTTTTCATCAAAAAAACAGAGAAGACGCCGA
ATTCCTCACCCGCCACAAAGCCCTTTCCCCGTCCCGCATCCGCGCCATCG
AAACCGGAGGTTGCCCTCACGCCGCCGTCCGCGAAGACATCAGCGCCAAC
CTCCTAGCCCTGCAAACCCTGCACAGACAATTCCAAACCGACCTCCTTCT
CATCGAATCCGGCGGCGACAACCTCGCTGCCAACTACAGTCGCGAGCTGG
CTGATTTCATCATCTACGTGATTGATGTCGCTGGTGGTGATAAGGTGCCC
CGCAAGGGTGGACCCGGTATCACGGGCTCGGATCTGCTGGTCGTGAACAA
GATCGACCTTGCTGAGGCAGTGGGTGCTGATTTGGCGGTCATGGAGAGGG
ATGCGGCGAAGATGCGCGAGGGTGGACCGACGGTCTTTGCGGTCGTGAAG
AGTGGTACGAGAGTGCAGGATATTGTCAATCTTATTTTGAGTGCTTGGAA
GGCGAGCGGTGCTTATGAGCATAGCCTGGCGAGGTGGAAGGCTGGTGCGA
AGAGGGGGTCCGGGAGTGTGGATGATGCGTGATTTAAATTAGTTTCCATA
TAT
back to top

Coding sequence (CDS) from alignment at KZ851900.1:375189..376241-

>M747DRAFT_272071-T1 ID=M747DRAFT_272071-T1|Name=M747DRAFT_272071-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2448bp|location=Sequence derived from alignment at KZ851900.1:375189..376241- (Aspergillus niger ATCC 13496)
AGAAGACGCCGAATTCCTCACCCGCCACAAAGCCCTTTCCCCGTCCCGCA
TCCGCGCCATCGAAACCGGAGGTTGCCCTCACGCCGCCGTCCGCGAAGAC
ATCAGCGCCAACCTCCTAGCCCTGCAAACCCTGCACAGACAATTCCAAAC
CGACCTCCTTCTCATCGAATCCGGCGGCGACAACCTCGCTGCCAACTACA
GTCGCGAGCTGGCTGATTTCATCATCTACGTGATTGATGTCGCTGGTGGT
GATAAGGTGCCCCGCAAGGGTGGACCCGGTATCACGGGCTCGGATCTGCT
GGTCGTGAACAAGATCGACCTTGCTGAGGCAGTGGGTGCTGATTTGGCGG
TCATGGAGAGGGATGCGGCGAAGATGCGCGAGGGTGGACCGACGGTCTTT
GCGGTCGTGAAGAGTGGTACGAGAGTGCAGGATATTGTCAATCTTATTTT
GAGTGCTTGGAAGGCGAGCGGTGCTTATGAGCATAGCCTGGCGAGGTGGA
AGGCTGGTGCGAAGAGGGGGTCCGGGAGTGTGGATGATGCGTGAACCCGT
CGGATCGGGCAAAACTGCCCTCATGCTGGCCCTCTGCCAGGCCCTCCGCG
ACGAGTACAACATCGCCGCCGTCACCAACGACATCTTCACCAGATGTCTC
ACTCTCACTCCCACGACAACGATGTCAGCCATTCCCACGATGACTTCGGT
GGTCACGGCCACTCCCATGAGATCCTCGACGGTCCCGGTTCATACATAAA
CCGTGAGATGCCTCTCTCGGAGGAGCGTGACTGGAAGGACCGTGCCTTTA
CCATTGGCATTGGAGGAGAAGACGCCGAATTCCTCACCCGCCACAAAGCC
CTTTCCCCGTCCCGCATCCGCGCCATCGAAACCGGAGGTTGCCCTCACGC
CGCCGTCCGCGAAGACATCAGCGCCAACCTCCTAGCCCTGCAAACCCTGC
ACAGACAATTCCAAACCGACCTCCTTCTCATCGAATCCGGCGGCGACAAC
CTCGCTGCCAACTACAGTCGCGAGCTGGCTGATTTCATCATCTACGTGAT
TGATGTCGCTGGTGGTGATAAGGTGCCCCGCAAGGGTGGACCCGGTATCA
CGGGCTCGGATCTGCTGGTCGTGAACAAGATCGACCTTGCTGAGGCAGTG
GGTGCTGATTTGGCGGTCATGGAGAGGGATGCGGCGAAGATGCGCGAGGG
TGGACCGACGGTCTTTGCGGTCGTGAAGAGTGGTACGAGAGTGCAGGATA
TTGTCAATCTTATTTTGAGTGCTTGGAAGGCGAGCGGTGCTTATGAGCAT
AGCCTGGCGAGGTGGAAGGCTGGTGCGAAGAGGGGGTCCGGGAGTGTGGA
TGATGCGTGAACCCGTCGGATCGGGCAAAACTGCCCTCATGCTGGCCCTC
TGCCAGGCCCTCCGCGACGAGTACAACATCGCCGCCGTCACCAACGACAT
CTTCACCAGATGTCTCACTCTCACTCCCACGACAACGATGTCAGCCATTC
CCACGATGACTTCGGTGGTCACGGCCACTCCCATGAGATCCTCGACGGTC
CCGGTTCATACATAAACCGTGAGATGCCTCTCTCGGAGGAGCGTGACTGG
AAGGACCGTGCCTTTACCATTGGCATTGGAGGAGAAGACGCCGAATTCCT
CACCCGCCACAAAGCCCTTTCCCCGTCCCGCATCCGCGCCATCGAAACCG
GAGGTTGCCCTCACGCCGCCGTCCGCGAAGACATCAGCGCCAACCTCCTA
GCCCTGCAAACCCTGCACAGACAATTCCAAACCGACCTCCTTCTCATCGA
ATCCGGCGGCGACAACCTCGCTGCCAACTACAGTCGCGAGCTGGCTGATT
TCATCATCTACGTGATTGATGTCGCTGGTGGTGATAAGGTGCCCCGCAAG
GGTGGACCCGGTATCACGGGCTCGGATCTGCTGGTCGTGAACAAGATCGA
CCTTGCTGAGGCAGTGGGTGCTGATTTGGCGGTCATGGAGAGGGATGCGG
CGAAGATGCGCGAGGGTGGACCGACGGTCTTTGCGGTCGTGAAGAGTGGT
ACGAGAGTGCAGGATATTGTCAATCTTATTTTGAGTGCTTGGAAGGCGAG
CGGTGCTTATGAGCATAGCCTGGCGAGGTGGAAGGCTGGTGCGAAGAGGG
GGTCCGGGAGTGTGGATGATGCGTGAACCCGTCGGATCGGGCAAAACTGC
CCTCATGCTGGCCCTCTGCCAGGCCCTCCGCGACGAGTACAACATCGCCG
CCGTCACCAACGACATCTTCACCAGATGTCTCACTCTCACTCCCACGACA
ACGATGTCAGCCATTCCCACGATGACTTCGGTGGTCACGGCCACTCCCAT
GAGATCCTCGACGGTCCCGGTTCATACATAAACCGTGAGATGCCTCTCTC
GGAGGAGCGTGACTGGAAGGACCGTGCCTTTACCATTGGCATTGGAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016151nickel cation binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_272071M747DRAFT_272071Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_272071-T1M747DRAFT_272071-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_272071-T1.cdsM747DRAFT_272071-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_272071-T1.utr3p1M747DRAFT_272071-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_272071-T1.exon3M747DRAFT_272071-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_272071-T1.exon2M747DRAFT_272071-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_272071-T1.exon1M747DRAFT_272071-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_272071-T1.utr5p1M747DRAFT_272071-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003495
DBxrefInterPro:IPR004400
DBxrefInterPro:IPR012202
DBxrefPFAM:PF02492
Producturease accessory protein UreG
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:375189..376241 -
Powered by Drupal