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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:623278..626264+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_272199-T1 ID=M747DRAFT_272199-T1|Name=M747DRAFT_272199-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2987bp|location=Sequence derived from alignment at KZ851900.1:623278..626264+ (Aspergillus niger ATCC 13496)
ATTTGGTGCTTTGCTTCTCTATCGCATCCTTCTTTATTTCTGCTTGGCTG
CAGTAGAGGTGGTGGTTTGGCTCTATTATCTTCTATATTTTTCTACATTC
ATCTGCATTTTATATTTTCTTGGTTGGCTGTTTCGTCTGCGCCGTTGCCT
CTCTCCCTCCAGAATTCTCTTCGCCGACTTCCGAGTTTCCTACGGTCTAC
GCGCCTTACGCTCCCACGATACCTAGTGGCAATCGGGTTGGGATATACCT
CTTGCCTTTCCTATCTCTTCTATAAAGGAAGTTGGATCTTACACTACGAA
TCGAACAGCGTGTCCTTCGTTCCCCGCCTTAGATGCTTCGTTGCGGCAAT
GCCACCGCTCTCCGGTCCGGAAGCGTGGCAATGAGACCACTTCTCCGCAC
ACAGTGGCTCCGGACTACCCCGAGTCGATCTTTCTTTCACATTGCGGAAT
CTGGACCTCGTATAGGAACATCATGGAGACACTCGGCGCGGATTGGGACT
CTGCACGCAAGGCAAATGCACGAGGCTGTGGCCGCGGAGGGCCCACCCGA
TATTACCTTCAAGGAGGAGAGTGCGCCTCGTGAGAAGGAGGAGGAAGAAA
GGGAGAGTGAGCCTGCAGACTCTGATGGAAAACAAAAGTCTCCTCAGTCT
GGTTCCGCCACAGAAGAAGTGCTTGATAAACGGACGCTACTGCGTCGGCT
TGTTCGGAGGGAATGGGTGCCGCAGACGTACTTCGTTCCTCTCTCTGTGG
TGAATGCGGAGTTGAAATGGCTGCGTGACCCATTGGCGCTGGCCGAGCGC
GTCCGGCGTTGTCTGGCAGATGGGCACCTGGCGCTTGGTGTGTCGCTTGT
TTATAAGGCCCAGAGCAAAGGGTTCAGGTGCACTGCGGCTTTTAATCGGC
TGTTGGAGTATCTATTGCGGGAGAAGGAGCCGGAGCTTGCGTTCAGAGCT
TGGAATGATGTATGTTCCTTTTCACCCTTCTATTCTTCGTTATTGTTGTT
TCTGGATTATCGATCCCTGGCTGACCAAATGCTCATTTGAAATGTAACAG
ATGAAAAAGCGAGGTATCGAACTTAACTCGAGATCTTACACTGTTTTCCT
GAACGGTCTCTGCCAGGACTTCGACATTAAGGGCTTCAAGCCGGTGAAAT
TGGCCTCGAAAATCTACATGTCGCTCTACGCTGAGACTTCCGTCGTCGAA
CCCCATATCATCCACGCCAATGCAATGCTTAAGGTCTGCTGGTGGCACCG
AGATATGGAAGTTCTATGGGAGGTTGCTGGTGCACTGCCGGAGTCCGGCA
AGCTAGCCCCGGACCTATTGACCTACACCACGCTGTTAGGGGCTATCGCA
GGTAGTACGAGGGCCGAAACGTCGGAGTTGTATAAGGGAAATATCAAGAC
GGCGGAAAGAAAACAAGTTGAAGTTGAGCCGCTTCTGCAAAGGAGAGCTC
AGGGAATACAGGAAGCCAAACGGGTCTGGGCCGACATTGTTTATCAATGG
AAGAAGGGCCGGGTGCCCATGGACAATTATCTGGCTCACGCCATGGCCCA
CATGTTGCAGGAGAACTCGAGCTGTGACCACGATGTGTGGTGCGTGTTTG
CTTTGTATAATCAAACCGCTGGTATTCCAATCTTCGCCGAAGAGCCCCCG
AAGCAAAGGATAGAGCCAACTTCGGAGAAATCGCGGGTGCTTTCCCCGCA
CAAGGATGCGGACTTGGAAGATGATATCCCATTTGTCGACGAGGGAGACA
GATTACCCGATATCGAACCCGAGGATATGAAGGATGTGGAGGCCGAAGAG
GATTTCGATCATCTTTTCGACCCTGTTGTTGACACGGTGAAACCGCCTGC
GAAGACAAGGCTCTCTGTGAAAGATGAAGCGGCCCTCCCCTCGTATATTG
AGGTGGGAAACAGGGAGCTCACTATGCTTCTCAAAGCCTGCCTGTCGATA
ACACAAGGAACAGCCGCTGCAAAGGAATACTGGCGGTACCTTACGAAAGG
AGATGACTCGCATAAGGTCGTACCTGACGCGGTTAGCTATCACGCATACC
TACGCATTCTACGTGCTGCGCGGGCTAGTCGTGAAACCGTGGAAGTGGTA
CGCGATATGACTCGGGACCCCAACGGACCTACCGAAGGAAAGACCTTCCG
CATATCCATGGCCTCATGTACTCGGGACCGCAGAAACCCCAATGTGTTCA
GACACGCCAACGAGCTTCTGGATCTCATGGCCAACGGCATCGTGCTTCCC
GATGCTCGATCCATAACTCAATATCTCGACTTGGTCCATTCGCTGGAGGA
TAGTCCAGATCTACTGATGTCCCTCGCTGGCCTTGAGTCGGGAGCAGACG
CCAAATCAAACAATCTCAGCGCCCTAGGCGTGAAACTGAAGGCCAGCCTA
ATCACATCCGCCGCAGAACGGCTCTGTACCCTGATTCGGGACCTCGATGA
AGCCGTGTCCAGTGAACTATTGGGGCAGAAGTCTCGACAATCCTACCTGG
CCCGGGTGGCCAAGACCAATCCGGCGGCTGTGATTAGAGGAGAAGATGCC
CTCAAGGCACTTACTATGACACGAAGATTATTTGACTCGGTCAAAGAATT
CAAGCAACATGTTCCCCAGGAGACCTTCAAAGAGGTCCAGCGCCACGCCG
AGCTTCTGAAGAAATACTCCGACAAGAGCATTATCACGAAGTTCCGGAAA
ACCTTGGTCGGAGCGACCGAGGAGCAAATGAACAGATTCGCAGAGCGAGA
ATTACCCAGCCCATGAGTTCCTACTTATTGATCCAGTCCAGTCCTATCAG
CCGAGGGCCATTCGGATCCTTTTGCTTCATCCAAGTGGATCTATCTAACG
CCATGTTGCGTGGTCTCCACTCTTATTCAGTACAAAGTATAGCATAATCG
GGCGTTATAGAAAAGTCGATGTATCATAGCACATTTTGAAGGGGAGGACT
ATATGTATAATACTCTTGGAACATGAACATAGTACTC back to topCoding sequence (CDS) from alignment at KZ851900.1:623278..626264+ >M747DRAFT_272199-T1 ID=M747DRAFT_272199-T1|Name=M747DRAFT_272199-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4686bp|location=Sequence derived from alignment at KZ851900.1:623278..626264+ (Aspergillus niger ATCC 13496)
ATGCTTCGTTGCGGCAATGCCACCGCTCTCCGGTCCGGAAGCGTGGCAAT
GAGACCACTTCTCCGCACACAGTGGCTCCGGACTACCCCGAGTCGATCTT
TCTTTCACATTGCGGAATCTGGACCTCGTATAGGAACATCATGGAGACAC
TCGGCGCGGATTGGGACTCTGCACGCAAGGCAAATGCACGAGGCTGTGGC
CGCGGAGGGCCCACCCGATATTACCTTCAAGGAGGAGAGTGCGCCTCGTG
AGAAGGAGGAGGAAGAAAGGGAGAGTGAGCCTGCAGACTCTGATGGAAAA
CAAAAGTCTCCTCAGTCTGGTTCCGCCACAGAAGAAGTGCTTGATAAACG
GACGCTACTGCGTCGGCTTGTTCGGAGGGAATGGGTGCCGCAGACGTACT
TCGTTCCTCTCTCTGTGGTGAATGCGGAGTTGAAATGGCTGCGTGACCCA
TTGGCGCTGGCCGAGCGCGTCCGGCGTTGTCTGGCAGATGGGCACCTGGC
GCTTGGTGTGTCGCTTGTTTATAAGGCCCAGAGCAAAGGGTTCAGGTGCA
CTGCGGCTTTTAATCGGCTGTTGGAGTATCTATTGCGGGAGAAGGAGCCG
GAGCTTGCGTTCAGAGCTTGGAATGATATGAAAAAGCGAGGTATCGAACT
TAACTCGAGATCTTACACTGTTTTCCTGAACGGTCTCTGCCAGGACTTCG
ACATTAAGGGCTTCAAGCCGGTGAAATTGGCCTCGAAAATCTACATGTCG
CTCTACGCTGAGACTTCCGTCGTCGAACCCCATATCATCCACGCCAATGC
AATGCTTAAGGTCTGCTGGTGGCACCGAGATATGGAAGTTCTATGGGAGG
TTGCTGGTGCACTGCCGGAGTCCGGCAAGCTAGCCCCGGACCTATTGACC
TACACCACGCTGTTAGGGGCTATCGCAGGTAGTACGAGGGCCGAAACGTC
GGAGTTGTATAAGGGAAATATCAAGACGGCGGAAAGAAAACAAGTTGAAG
TTGAGCCGCTTCTGCAAAGGAGAGCTCAGGGAATACAGGAAGCCAAACGG
GTCTGGGCCGACATTGTTTATCAATGGAAGAAGGGCCGGGTGCCCATGGA
CAATTATCTGGCTCACGCCATGGCCCACATGTTGCAGGAGAACTCGAGCT
GTGACCACGATGTGTGGTGCGTGTTTGCTTTGTATAATCAAACCGCTGGT
ATTCCAATCTTCGCCGAAGAGCCCCCGAAGCAAAGGATAGAGCCAACTTC
GGAGAAATCGCGGGTGCTTTCCCCGCACAAGGATGCGGACTTGGAAGATG
ATATCCCATTTGTCGACGAGGGAGACAGATTACCCGATATCGAACCCGAG
GATATGAAGGATGTGGAGGCCGAAGAGGATTTCGATCATCTTTTCGACCC
TGTTGTTGACACGGTGAAACCGCCTGCGAAGACAAGGCTCTCTGTGAAAG
ATGAAGCGGCCCTCCCCTCGTATATTGAGGTGGGAAACAGGGAGCTCACT
ATGCTTCTCAAAGCCTGCCTGTCGATAACACAAGGAACAGCCGCTGCAAA
GGAATACTGGCGGTACCTTACGAAAGGAGATGACTCGCATAAGGTCGTAC
CTGACGCGGTTAGCTATCACGCATACCTACGCATTCTACGTGCTGCGCGG
GCTAGTCGTGAAACCGTGGAAGTGGTACGCGATATGACTCGGGACCCCAA
CGGACCTACCGAAGGAAAGACCTTCCGCATATCCATGGCCTCATGTACTC
GGGACCGCAGAAACCCCAATGTGTTCAGACACGCCAACGAGCTTCTGGAT
CTCATGGCCAACGGCATCGTGCTTCCCGATGCTCGATCCATAACTCAATA
TCTCGACTTGGTCCATTCGCTGGAGGATAGTCCAGATCTACTGATGTCCC
TCGCTGGCCTTGAGTCGGGAGCAGACGCCAAATCAAACAATCTCAGCGCC
CTAGGCGTGAAACTGAAGGCCAGCCTAATCACATCCGCCGCAGAACGGCT
CTGTACCCTGATTCGGGACCTCGATGAAGCCGTGTCCAGTGAACTATTGG
GGCAGAAGTCTCGACAATCCTACCTGGCCCGGGTGGCCAAGACCAATCCG
GCGGCTGTGATTAGAGGAGAAGATGCCCTCAAGGCACTTACTATGACACG
AAGATTATTTGACTCGGTCAAAGAATTCAAGCAACATGTTCCCCAGGAGA
CCTTCAAAGAGGTCCAGCGCCACGCCGAGCTTCTGAAGAAATACTCCGAC
AAGAGCATTATCACGAAGTTCCGGAAAACCTTGGTCGGAGCGACCGAGGA
GCAAATGAACAGATTCGCAGAGCGAGAATTACCCAGCCCATGAATGCTTC
GTTGCGGCAATGCCACCGCTCTCCGGTCCGGAAGCGTGGCAATGAGACCA
CTTCTCCGCACACAGTGGCTCCGGACTACCCCGAGTCGATCTTTCTTTCA
CATTGCGGAATCTGGACCTCGTATAGGAACATCATGGAGACACTCGGCGC
GGATTGGGACTCTGCACGCAAGGCAAATGCACGAGGCTGTGGCCGCGGAG
GGCCCACCCGATATTACCTTCAAGGAGGAGAGTGCGCCTCGTGAGAAGGA
GGAGGAAGAAAGGGAGAGTGAGCCTGCAGACTCTGATGGAAAACAAAAGT
CTCCTCAGTCTGGTTCCGCCACAGAAGAAGTGCTTGATAAACGGACGCTA
CTGCGTCGGCTTGTTCGGAGGGAATGGGTGCCGCAGACGTACTTCGTTCC
TCTCTCTGTGGTGAATGCGGAGTTGAAATGGCTGCGTGACCCATTGGCGC
TGGCCGAGCGCGTCCGGCGTTGTCTGGCAGATGGGCACCTGGCGCTTGGT
GTGTCGCTTGTTTATAAGGCCCAGAGCAAAGGGTTCAGGTGCACTGCGGC
TTTTAATCGGCTGTTGGAGTATCTATTGCGGGAGAAGGAGCCGGAGCTTG
CGTTCAGAGCTTGGAATGATATGAAAAAGCGAGGTATCGAACTTAACTCG
AGATCTTACACTGTTTTCCTGAACGGTCTCTGCCAGGACTTCGACATTAA
GGGCTTCAAGCCGGTGAAATTGGCCTCGAAAATCTACATGTCGCTCTACG
CTGAGACTTCCGTCGTCGAACCCCATATCATCCACGCCAATGCAATGCTT
AAGGTCTGCTGGTGGCACCGAGATATGGAAGTTCTATGGGAGGTTGCTGG
TGCACTGCCGGAGTCCGGCAAGCTAGCCCCGGACCTATTGACCTACACCA
CGCTGTTAGGGGCTATCGCAGGTAGTACGAGGGCCGAAACGTCGGAGTTG
TATAAGGGAAATATCAAGACGGCGGAAAGAAAACAAGTTGAAGTTGAGCC
GCTTCTGCAAAGGAGAGCTCAGGGAATACAGGAAGCCAAACGGGTCTGGG
CCGACATTGTTTATCAATGGAAGAAGGGCCGGGTGCCCATGGACAATTAT
CTGGCTCACGCCATGGCCCACATGTTGCAGGAGAACTCGAGCTGTGACCA
CGATGTGTGGTGCGTGTTTGCTTTGTATAATCAAACCGCTGGTATTCCAA
TCTTCGCCGAAGAGCCCCCGAAGCAAAGGATAGAGCCAACTTCGGAGAAA
TCGCGGGTGCTTTCCCCGCACAAGGATGCGGACTTGGAAGATGATATCCC
ATTTGTCGACGAGGGAGACAGATTACCCGATATCGAACCCGAGGATATGA
AGGATGTGGAGGCCGAAGAGGATTTCGATCATCTTTTCGACCCTGTTGTT
GACACGGTGAAACCGCCTGCGAAGACAAGGCTCTCTGTGAAAGATGAAGC
GGCCCTCCCCTCGTATATTGAGGTGGGAAACAGGGAGCTCACTATGCTTC
TCAAAGCCTGCCTGTCGATAACACAAGGAACAGCCGCTGCAAAGGAATAC
TGGCGGTACCTTACGAAAGGAGATGACTCGCATAAGGTCGTACCTGACGC
GGTTAGCTATCACGCATACCTACGCATTCTACGTGCTGCGCGGGCTAGTC
GTGAAACCGTGGAAGTGGTACGCGATATGACTCGGGACCCCAACGGACCT
ACCGAAGGAAAGACCTTCCGCATATCCATGGCCTCATGTACTCGGGACCG
CAGAAACCCCAATGTGTTCAGACACGCCAACGAGCTTCTGGATCTCATGG
CCAACGGCATCGTGCTTCCCGATGCTCGATCCATAACTCAATATCTCGAC
TTGGTCCATTCGCTGGAGGATAGTCCAGATCTACTGATGTCCCTCGCTGG
CCTTGAGTCGGGAGCAGACGCCAAATCAAACAATCTCAGCGCCCTAGGCG
TGAAACTGAAGGCCAGCCTAATCACATCCGCCGCAGAACGGCTCTGTACC
CTGATTCGGGACCTCGATGAAGCCGTGTCCAGTGAACTATTGGGGCAGAA
GTCTCGACAATCCTACCTGGCCCGGGTGGCCAAGACCAATCCGGCGGCTG
TGATTAGAGGAGAAGATGCCCTCAAGGCACTTACTATGACACGAAGATTA
TTTGACTCGGTCAAAGAATTCAAGCAACATGTTCCCCAGGAGACCTTCAA
AGAGGTCCAGCGCCACGCCGAGCTTCTGAAGAAATACTCCGACAAGAGCA
TTATCACGAAGTTCCGGAAAACCTTGGTCGGAGCGACCGAGGAGCAAATG
AACAGATTCGCAGAGCGAGAATTACCCAGCCCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002885 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF13041 |
| Product | pentatricopeptide repeat protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:623278..626264 + |
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